lineage | Count |
---|---|
lineage2.2.1 | 41 |
lineage4.3.3 | 1 |
lineage4.3.2 | 4 |
lineage2.2.1.1 | 3 |
lineage4.2.2.2 | 2 |
lineage4.1.2 | 2 |
lineage2.2.1.2 | 2 |
lineage4.2.1.1 | 2 |
lineage2.2.2 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.4.2 | 2 |
lineage4.3 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 | SRR12420588 | Sensitive | lineage2.2.1 | None | SRR20958122 | Sensitive | lineage4.3.3 | None | ERR4830572 | MDR-TB | lineage2.2.1 | tm | SRR5535396 | RR-TB | lineage2.2.1 | None | SRR28351424 | XDR-TB | lineage2.2.1 | None | SRR28393942 | Pre-XDR-TB | lineage4.3.2 | None | SRR29538913 | MDR-TB | lineage2.2.1 | None | SRR6831843 | MDR-TB | lineage2.2.1 | None | ERR11068632 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750915 | Sensitive | lineage2.2.1.1 | za | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR10851690 | Sensitive | lineage4.1.2 | None | SRR6153009 | HR-TB | lineage4.2.2.2 | ca | SRR1723784 | Sensitive | lineage2.2.1.2 | cn | SRR2101533 | Sensitive | lineage2.2.1 | None | ERR2516404 | Pre-XDR-TB | lineage4.3.2 | pe | ERR13276014 | HR-TB | lineage4.2.1.1 | None | ERR4796965 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR2307757 | MDR-TB | lineage2.2.1 | None | SRR14782130 | Sensitive | lineage4.2.1.1 | None | ERR2307736 | MDR-TB | lineage2.2.1 | None | SRR29539164 | MDR-TB | lineage2.2.1 | None | SRR26112454 | Sensitive | lineage2.2.2 | None | ERR4872309 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420800 | Sensitive | lineage2.2.1 | None | SRR14782160 | XDR-TB | lineage2.2.1 | None | SRR29539721 | MDR-TB | lineage2.2.1 | None | SRR6832739 | HR-TB | lineage2.2.1 | None | SRR12420392 | HR-TB | lineage2.2.1 | None | SRR15014770 | MDR-TB | lineage1.2.2.2 | None | ERR4872319 | XDR-TB | lineage2.2.1 | None | ERR751749 | Sensitive | lineage1.1.1 | th | ERR2307504 | MDR-TB | lineage2.2.1 | None | ERR2516409 | Pre-XDR-TB | lineage4.3.2 | pe | SRR23691348 | HR-TB | lineage2.2.1 | None | SRR14164663 | Sensitive | lineage4.1.2.1 | None | SRR10040243 | Pre-XDR-TB | lineage2.2.1 | None | ERR234666 | MDR-TB | lineage2.2.1;lineage4 | ru | ERR5866080 | MDR-TB | lineage2.2.1 | None | SRR15368872 | Sensitive | lineage4.4.2 | None | SRR11972295 | MDR-TB | lineage2.2.1.1 | None | ERR4810916 | Sensitive | lineage4.4.2 | cn | SRR12420682 | HR-TB | lineage2.2.1 | None | SRR26112726 | Sensitive | lineage2.2.1.1 | None | SRR12420688 | Sensitive | lineage2.2.1 | None | SRR21732417 | Sensitive | lineage4.3 | None | SRR6982346 | Sensitive | lineage2.2.1 | None | SRR25515257 | Sensitive | lineage2.2.1 | None | ERR2600490 | MDR-TB | lineage4.1 | None | SRR12420334 | Sensitive | lineage2.2.1 | None | ERR5866081 | MDR-TB | lineage2.2.1 | None | SRR14802216 | XDR-TB | lineage2.2.1 | None | ERR4814655 | Sensitive | lineage2.2.1 | None | SRR24256152 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773809 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498559 | XDR-TB | lineage2.2.1 | None | SRR10379886 | XDR-TB | lineage2.2.1 | None | SRR7517742 | MDR-TB | lineage2.2.1 | None | SRR8327859 | MDR-TB | lineage2.2.1 | None | SRR25206999 | MDR-TB | lineage2.2.1 | None | SRR29231021 | Sensitive | lineage4.1.2 | None | SRR20969948 | Sensitive | lineage2.2.1 | None | SRR12420804 | Sensitive | lineage2.2.1 | None | SRR20969920 | Other | lineage2.2.1 | None | ERR2516704 | Pre-XDR-TB | lineage4.3.2 | pe | ERR4816884 | Sensitive | lineage2.2.1 | None |
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