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SRA data
Rv3262
- c.658delTinsCTG
Drug resistance types
0 Sensitive
0 RR-TB
9 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
5
M.canetti;lineage2.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2.1;lineage4.9
1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
1
M.canetti;lineage2.1;lineage6.3
1
lineage2.1;lineage2.2;lineage6.3
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR3283016
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR3797016
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR5311078
MDR-TB
M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR5311081
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR5311082
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
None
ERR5311089
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR5311100
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR8976043
HR-TB
lineage2.1;lineage2.2;lineage6.3
None
SRR3675506
HR-TB
M.canetti;lineage2.1;lineage4.9
None
Showing 1 to 10 of 16 entries
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