| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| lineage4.3.3 | 6 |
| lineage2.2.2 | 8 |
| lineage4.1.2.1 | 2 |
| lineage3 | 2 |
| lineage1.2.2.2 | 8 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.2;lineage4.1;lineage4.3.3 | 1 |
| lineage4.8 | 5 |
| lineage1.2.1.2.1 | 1 |
| spoligotype | Count |
|---|---|
| None | 58 |
| ID | Drug resistance | Lineage | Country iso2 | ERR2515173 | MDR-TB | lineage2.2.1 | za | ERR2515797 | MDR-TB | lineage4.3.3 | za | ERR2515589 | Pre-XDR-TB | lineage2.2.1 | za | ERR5917976 | XDR-TB | lineage4.3.3 | za | ERR4809076 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918115 | Pre-XDR-TB | lineage2.2.1 | za | ERR4828954 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4831457 | Pre-XDR-TB | lineage3 | None | ERR4831448 | Pre-XDR-TB | lineage3 | None | ERR8975005 | XDR-TB | lineage2.2.1 | None | ERR8975950 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917973 | MDR-TB | lineage1.2.2.2 | None | ERR8976089 | MDR-TB | lineage1.2.2.2 | None | SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th | SAMN02403451 | Pre-XDR-TB | lineage2.2.2 | za | ERR9993069 | XDR-TB | lineage2.2.2 | None | ERR9993062 | XDR-TB | lineage1.2.2.2 | None | ERR9993231 | XDR-TB | lineage2.2.1 | None | ERR9993077 | XDR-TB | lineage2.2.2 | None | ERR4798617 | XDR-TB | lineage2.2.1 | in | ERR13286094 | MDR-TB | lineage1.2.2.2;lineage4.1;lineage4.3.3 | None | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR13289054 | MDR-TB | lineage2.2.1 | None | ERR13289353 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992662 | XDR-TB | lineage2.2.1 | None | ERR13289358 | XDR-TB | lineage2.2.2 | None | ERR13289360 | XDR-TB | lineage2.2.2 | None | ERR9993089 | XDR-TB | lineage2.2.2 | None | ERR13289350 | XDR-TB | lineage2.2.2 | None | ERR9992949 | XDR-TB | lineage1.2.2.2 | None | ERR2515238 | Pre-XDR-TB | lineage2.2.1 | za | ERR10748207 | XDR-TB | lineage1.2.2.2 | None | ERR9992758 | Pre-XDR-TB | lineage4.8 | None | ERR9992991 | Pre-XDR-TB | lineage4.8 | None | SRR16157104 | Pre-XDR-TB | lineage4.8 | None | SRR16157095 | Pre-XDR-TB | lineage4.8 | None | SRR21685364 | HR-TB | lineage1.2.1.2.1 | None | ERR1035078 | Pre-XDR-TB | lineage2.2.1 | za | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | ERR2510843 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510845 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510846 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510838 | Pre-XDR-TB | lineage2.2.1 | it | ERR1873532 | Pre-XDR-TB | lineage2.2.1 | za | ERR9992825 | XDR-TB | lineage1.2.2.2 | None | ERR9992963 | XDR-TB | lineage1.2.2.2 | None | ERR9992961 | XDR-TB | lineage1.2.2.2 | None | ERR2515301 | XDR-TB | lineage2.2.1 | za | ERR4808891 | Pre-XDR-TB | lineage4.3.3 | za | ERR3287322 | MDR-TB | lineage4.1.2.1 | pe | ERR4809177 | XDR-TB | lineage2.2.1 | za | ERR8975008 | XDR-TB | lineage2.2.1 | None | ERR8975531 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809248 | MDR-TB | lineage4.3.3 | za | ERR8975040 | Pre-XDR-TB | lineage2.2.1 | None | DRR130175 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096374 | Pre-XDR-TB | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None |
|---|