Rv3423c - p.Asp344Asn
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
1 Sensitive
0 RR-TB
2 HR-TB
2 MDR-TB
88 Pre-XDR-TB
9 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 41 |
| lineage4.2.1 | 29 |
| lineage4.1.1.3 | 3 |
| lineage2.2.2 | 7 |
| lineage2.2.1.1 | 3 |
| lineage4.8 | 2 |
| lineage2.2.1;lineage4.2.1 | 4 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2;lineage3 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3 | 2 |
| lineage4.3.3 | 2 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13267096 | Pre-XDR-TB | lineage4.2.2 | None | SRR7592360 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4872264 | XDR-TB | lineage2.2.1 | None | SRR23311011 | HR-TB | lineage4.2.1 | None | ERR4896323 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1013672 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013673 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360615 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049066 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049067 | Pre-XDR-TB | lineage2.2.2 | None | SRR28498448 | XDR-TB | lineage4.2.1 | None | SRR28351212 | XDR-TB | lineage2.2.1.1 | None | ERR3639772 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516297 | Pre-XDR-TB | lineage2.2.1 | be | ERR4815753 | Pre-XDR-TB | lineage2.2.1 | gb | SRR25515647 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820004 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284110 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755646 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755664 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798722 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274774 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045563 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10397179 | Pre-XDR-TB | lineage2.2.1 | None | SRR7646041 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645872 | Pre-XDR-TB | lineage4.2.1 | None | SRR7592373 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284100 | Pre-XDR-TB | lineage2.2.1 | None | ERR2199836 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276874 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872293 | XDR-TB | lineage2.2.1 | None | SRR3743484 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755715 | Pre-XDR-TB | lineage4.2.1 | None | SRR6257057 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755701 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798720 | XDR-TB | lineage4.2.1 | None | ERR4829005 | Pre-XDR-TB | lineage4.8 | None | ERR13276302 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR13260903 | XDR-TB | lineage1.2.2.2 | None | ERR4817085 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645823 | Pre-XDR-TB | lineage4.2.1 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653173 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7755671 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755683 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR29539851 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR14164844 | Sensitive | lineage4.7 | None | SRR28498722 | Pre-XDR-TB | lineage4.2.1 | None | ERR7911536 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR10397134 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645942 | Pre-XDR-TB | lineage4.2.1 | None | ERR13266575 | XDR-TB | lineage2.2.1.1 | None | ERR5864839 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762446 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755730 | Pre-XDR-TB | lineage4.2.1 | None | SRR7516292 | Pre-XDR-TB | lineage2.2.1 | None | ERR11083035 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709955 | XDR-TB | lineage2.2.1 | None | ERR13276210 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261958 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR7755721 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307436 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093109 | Pre-XDR-TB | lineage2.2.2 | None | SRR7755762 | Pre-XDR-TB | lineage4.2.1 | None | ERR13262055 | Pre-XDR-TB | lineage1.1.2 | None | SRR7755677 | Pre-XDR-TB | lineage4.2.1 | None | ERR11081510 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972439 | MDR-TB | lineage1.1.3 | None | ERR4872276 | Pre-XDR-TB | lineage4.2.1 | None | SRR23310924 | HR-TB | lineage4.2.1 | None | SRR14782681 | Pre-XDR-TB | lineage4.2.1 | None | ERR5864840 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807725 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173449 | Pre-XDR-TB | lineage4.3.3 | None | SRR7516455 | Pre-XDR-TB | lineage2.2.1 | None | ERR403276 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743382 | Pre-XDR-TB | lineage4.2.1 | None | SRR28434995 | XDR-TB | lineage2.2.1 | None | SRR7653608 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653081 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7592347 | Pre-XDR-TB | lineage4.8 | None | ERR8025630 | Pre-XDR-TB | lineage2.2.2 | None | SRR14782224 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4872263 | Pre-XDR-TB | lineage4.2.1 | None | SRR11972442 | MDR-TB | lineage1.1.3 | None | ERR11798721 | Pre-XDR-TB | lineage4.2.1 | None | ERR2200137 | Pre-XDR-TB | lineage2.2.1 | None | ERR9807036 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285712 | Pre-XDR-TB | lineage4.2.1 | None | ERR2307741 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266670 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755720 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR28045544 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938675 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807713 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173780 | Pre-XDR-TB | lineage4.3.3 | None | ERR13281472 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866421 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284133 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379906 | Pre-XDR-TB | lineage4.2.1 | None |
|---|
