Rv3423c - p.Ser22Leu
Drug resistance types
0 Sensitive
1 RR-TB
4 HR-TB
47 MDR-TB
178 Pre-XDR-TB
11 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 18 |
| lineage3 | 7 |
| lineage4.3.3 | 40 |
| lineage2.2.2 | 25 |
| lineage4.8 | 8 |
| lineage4.1.2.1 | 11 |
| lineage2.2.1 | 104 |
| lineage2.2 | 8 |
| lineage1.2.2.2 | 11 |
| lineage3.1.2 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.1.1;lineage2.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 241 |
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6256976 | Pre-XDR-TB | lineage4.2.1 | ru | ERR4831448 | Pre-XDR-TB | lineage3 | None | ERR4831457 | Pre-XDR-TB | lineage3 | None | SRR924227 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872283 | Pre-XDR-TB | lineage4.2.1 | None | ERR4872300 | Pre-XDR-TB | lineage4.2.1 | None | SAMN02403451 | Pre-XDR-TB | lineage2.2.2 | za | SRR6807713 | Pre-XDR-TB | lineage4.2.1 | None | SRR7341687 | Pre-XDR-TB | lineage4.8 | ro | SRR9738549 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4831449 | Pre-XDR-TB | lineage3 | None | ERR4831572 | Pre-XDR-TB | lineage2.2.1 | None | SRR7341656 | MDR-TB | lineage4.8 | ro | SRR7516455 | Pre-XDR-TB | lineage2.2.1 | None | SRR8426601 | Pre-XDR-TB | lineage2.2.1 | None | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | SRR7592340 | MDR-TB | lineage4.1.2.1 | None | SRR7645867 | MDR-TB | lineage2.2.1 | None | SRR7646041 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755664 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755671 | Pre-XDR-TB | lineage4.2.1 | None | SRR8847017 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755732 | Pre-XDR-TB | lineage2.2.1 | None | ERR019560 | Pre-XDR-TB | lineage2.2 | None | DRR130069 | Pre-XDR-TB | lineage2.2.1 | None | DRR130107 | Pre-XDR-TB | lineage2.2.1 | None | DRR130175 | Pre-XDR-TB | lineage2.2.1 | None | DRR130174 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755762 | Pre-XDR-TB | lineage4.2.1 | None | SRR998857 | Pre-XDR-TB | lineage4.2.1 | None | ERR10748245 | MDR-TB | lineage4.3.3 | None | ERR1035078 | Pre-XDR-TB | lineage2.2.1 | za | ERR10748249 | MDR-TB | lineage4.3.3 | None | ERR10748297 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762379 | Pre-XDR-TB | lineage4.2.1 | None | ERR3287322 | MDR-TB | lineage4.1.2.1 | pe | ERR10748207 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4423544 | MDR-TB | lineage4.3.3 | None | ERR4011061 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423490 | MDR-TB | lineage4.3.3 | None | ERR4423491 | MDR-TB | lineage4.3.3 | None | ERR4423543 | MDR-TB | lineage4.3.3 | None | ERR4797504 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796383 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR4798942 | XDR-TB | lineage3.1.2 | in | ERR4798457 | XDR-TB | lineage2.2.1 | in | ERR4798617 | XDR-TB | lineage2.2.1 | in | ERR4809177 | XDR-TB | lineage2.2.1 | za | ERR4808891 | Pre-XDR-TB | lineage4.3.3 | za | ERR4809076 | Pre-XDR-TB | lineage2.2.2 | za | ERR5865855 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809248 | MDR-TB | lineage4.3.3 | za | ERR5865856 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866422 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866423 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866421 | Pre-XDR-TB | lineage2.2 | None | ERR5918115 | Pre-XDR-TB | lineage2.2.1 | za | ERR5917973 | MDR-TB | lineage1.2.2.2 | None | ERR5917976 | Pre-XDR-TB | lineage4.3.3 | za | ERR5987203 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987189 | MDR-TB | lineage4.3.3 | None | ERR5987215 | MDR-TB | lineage4.3.3 | None | ERR5987211 | MDR-TB | lineage4.3.3 | None | ERR5987277 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987341 | MDR-TB | lineage4.3.3 | None | ERR5987284 | MDR-TB | lineage4.3.3 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987353 | MDR-TB | lineage4.3.3 | None | ERR5987371 | MDR-TB | lineage4.3.3 | None | ERR6052044 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987395 | MDR-TB | lineage4.3.3 | None | ERR6052039 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975005 | Pre-XDR-TB | lineage2.2.1 | None | ERR6052100 | MDR-TB | lineage4.3.3 | None | ERR6362466 | MDR-TB | lineage4.3.3 | None | ERR7911208 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911543 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911577 | Pre-XDR-TB | lineage2.2.1 | za | ERR8975531 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975680 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976089 | MDR-TB | lineage1.2.2.2 | None | ERR9119963 | MDR-TB | lineage4.3.3 | None | ERR9119964 | MDR-TB | lineage4.3.3 | None | ERR9119972 | MDR-TB | lineage4.3.3 | None | ERR9119975 | MDR-TB | lineage4.3.3 | None | ERR9120081 | MDR-TB | lineage4.3.3 | None | ERR9120112 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120135 | Pre-XDR-TB | lineage2.2.1 | None | ERR6052072 | MDR-TB | lineage4.3.3 | None | ERR7361989 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911580 | Pre-XDR-TB | lineage2.2.1 | za | ERR8975008 | XDR-TB | lineage2.2.1 | None | ERR8975040 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975752 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975950 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119743 | MDR-TB | lineage4.3.3 | None | ERR9119809 | MDR-TB | lineage4.3.3 | None | ERR9119971 | MDR-TB | lineage4.3.3 | None | ERR9119976 | MDR-TB | lineage4.3.3 | None | ERR9120082 | MDR-TB | lineage4.3.3 | None | ERR9120111 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120134 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992758 | Pre-XDR-TB | lineage4.8 | None | ERR9992662 | XDR-TB | lineage2.2.1 | None | ERR9992763 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992694 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992825 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992844 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992963 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992893 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992949 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992955 | MDR-TB | lineage1.2.2.2 | None | ERR9992961 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992986 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9993062 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992991 | Pre-XDR-TB | lineage4.8 | None | ERR9993057 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9993069 | XDR-TB | lineage2.2.2 | None | ERR9993089 | XDR-TB | lineage2.2.2 | None | ERR9993077 | XDR-TB | lineage2.2.2 | None | SRR1013559 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993231 | XDR-TB | lineage2.2.1 | None | SRR1013560 | Pre-XDR-TB | lineage2.2.2 | None | SRR10525361 | MDR-TB | lineage4.1.2.1 | None | SRR10379956 | Pre-XDR-TB | lineage4.2.1 | None | SRR10397179 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | SRR10525320 | MDR-TB | lineage4.1.2.1 | None | SRR1013683 | Pre-XDR-TB | lineage2.2 | None | SRR1013682 | Pre-XDR-TB | lineage2.2.2 | None | SRR10379979 | Pre-XDR-TB | lineage4.2.1 | None | SRR1048858 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048859 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049068 | Pre-XDR-TB | lineage2.2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR10869095 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869189 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869223 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869300 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869269 | Pre-XDR-TB | lineage2.2.2 | None | SRR14782620 | Pre-XDR-TB | lineage4.2.1 | None | SRR1167310 | Pre-XDR-TB | lineage2.2 | None | SRR1165229 | Pre-XDR-TB | lineage2.2 | None | SRR1173405 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173500 | Pre-XDR-TB | lineage2.2.2 | None | SRR14782651 | Pre-XDR-TB | lineage4.2.1 | None | SRR14802011 | Pre-XDR-TB | lineage2.2.1 | None | SRR2075817 | Pre-XDR-TB | lineage2.2.2 | None | SRR16157095 | Pre-XDR-TB | lineage4.8 | None | SRR18149468 | Pre-XDR-TB | lineage2.2.1 | None | SRR2075818 | Pre-XDR-TB | lineage2.2.2 | None | SRR2075820 | Pre-XDR-TB | lineage2.2.2 | None | SRR16157104 | Pre-XDR-TB | lineage4.8 | None | SRR16588747 | Pre-XDR-TB | lineage2.2.1 | None | SRR2075822 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576641 | MDR-TB | lineage4.5 | None | SRR21576624 | MDR-TB | lineage4 | None | SRR2075823 | Pre-XDR-TB | lineage2.2.2 | None | ERR8025513 | Pre-XDR-TB | lineage2.2.1 | None | SRR21685364 | HR-TB | lineage1.2.1.2.1 | None | ERR8025511 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025616 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025549 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025523 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025594 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025627 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806841 | Pre-XDR-TB | lineage4.3.3 | None | ERR8025750 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025753 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806914 | Pre-XDR-TB | lineage2.2.1 | None | ERR9807005 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025715 | Pre-XDR-TB | lineage2.2.1 | None | ERR9807041 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025621 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025705 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025685 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025707 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112865 | Pre-XDR-TB | lineage4.8 | None | ERR9806928 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806969 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806970 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112848 | Pre-XDR-TB | lineage4.8 | None | ERR8025526 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610190 | Pre-XDR-TB | lineage4.3.3 | None | ERR8025604 | Pre-XDR-TB | lineage4.4.1.1;lineage2.2.1 | None | ERR8025535 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873425 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758365 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758329 | Pre-XDR-TB | lineage2.2.2 | None | ERR4896321 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758331 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873477 | Pre-XDR-TB | lineage2.2.1 | za | SRR3085358 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082123 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085275 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085325 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812838 | Pre-XDR-TB | lineage2.2 | None | SRR3086359 | Pre-XDR-TB | lineage2.2.1 | None | SRR3086407 | Pre-XDR-TB | lineage2.2.1 | None | SRR3105791 | Pre-XDR-TB | lineage3 | None | SRR3743369 | Pre-XDR-TB | lineage4.2.1 | None | ERR4817106 | HR-TB | lineage4.1.2.1 | gb | ERR4813131 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360559 | Pre-XDR-TB | lineage2.2.2 | kr | SRR3743486 | Pre-XDR-TB | lineage4.2.1 | None | SRR3743372 | MDR-TB | lineage2.2 | None | SRR3743407 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510845 | Pre-XDR-TB | lineage2.2.1 | it | SRR3743489 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517023 | Pre-XDR-TB | lineage3 | gb | ERR2510838 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510846 | Pre-XDR-TB | lineage2.2.1 | it | ERR234601 | Pre-XDR-TB | lineage2.2.1 | ru | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | SAMEA2534314 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2515301 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516947 | Pre-XDR-TB | lineage3 | gb | SRR847779_SRR924227 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510843 | Pre-XDR-TB | lineage2.2.1 | it | SRR5163781 | Pre-XDR-TB | lineage4.2.1 | None | ERR2515589 | Pre-XDR-TB | lineage2.2.1 | za | ERR2517007 | MDR-TB | lineage4.1.2.1 | gb | ERR2515797 | MDR-TB | lineage4.3.3 | za | ERR1873532 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516859 | MDR-TB | lineage4.1.2.1 | gb | ERR2516750 | Pre-XDR-TB | lineage3 | gb | ERR2515173 | MDR-TB | lineage2.2.1 | za | ERR2515238 | Pre-XDR-TB | lineage2.2.1 | za | ERR4828358 | HR-TB | lineage2.2.1 | None | SRR23310874 | MDR-TB | lineage4.2.1 | None | SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th | SRR5486894 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2653081 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR2653229 | Pre-XDR-TB | lineage4.4.1 | None | SRR23310838 | MDR-TB | lineage2.2 | None | ERR4828954 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829695 | HR-TB | lineage4.1.2.1 | it | SRR611415 | MDR-TB | lineage2.2.1 | None | SRR611416 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
