Rv3423c - p.Thr20Met

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
1 Sensitive 0 RR-TB 1 HR-TB 32 MDR-TB 73 Pre-XDR-TB 6 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.2 9
lineage4.1.2.1 20
lineage4.3.3 10
lineage4.2.1 12
lineage2.2.1;lineage3.1.2 1
lineage2.2.1 36
lineage4.7 2
lineage4.8 7
lineage4.4.1.1 3
lineage3 1
lineage4.1.1 2
lineage4.3.2 1
lineage4.3.4.1 1
lineage2.2.1;lineage3 2
lineage3.1 1
lineage4.3.4.2 1
lineage4.3.3;lineage4.8 3
lineage1.1.3.3;lineage2.2.1;lineage3 1
spoligotype Counts
spoligotype Count
None 113
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10869269 Pre-XDR-TB lineage2.2.2 None
SRR7592330 Pre-XDR-TB lineage4.1.2.1 None
SRR10315625 Pre-XDR-TB lineage4.3.3 None
SRR23310965 Pre-XDR-TB lineage4.2.1 None
ERR11043578 MDR-TB lineage4.2.1 None
SRR7069453 MDR-TB lineage4.1.2.1 None
SRR25827747 XDR-TB lineage2.2.1;lineage3.1.2 None
SRR1003102 Pre-XDR-TB lineage2.2.1 None
SRR29274015 MDR-TB lineage4.1.2.1 None
SRR24466751 MDR-TB lineage4.1.2.1 None
SRR29096574 Pre-XDR-TB lineage2.2.1 None
SRR25827456 MDR-TB lineage2.2.1 None
ERR13285158 Pre-XDR-TB lineage4.7 None
ERR11043129 MDR-TB lineage4.2.1 None
SRR29273696 MDR-TB lineage4.1.2.1 None
ERR11081339 MDR-TB lineage4.2.1 None
ERR13285082 MDR-TB lineage4.2.1 None
SRR23340105 Pre-XDR-TB lineage2.2.1 None
SRR21576538 MDR-TB lineage2.2.1 None
SRR1013539 Pre-XDR-TB lineage2.2.1 None
SRR1048839 Pre-XDR-TB lineage2.2.1 None
SRR9738483 MDR-TB lineage4.1.2.1 None
SRR29273940 MDR-TB lineage4.8 None
ERR13285073 MDR-TB lineage4.2.1 None
ERR13250071 Pre-XDR-TB lineage4.3.3 None
SRR1013538 Pre-XDR-TB lineage2.2.1 None
SRR29273983 MDR-TB lineage4.8 None
SRR1013638 Pre-XDR-TB lineage2.2.1 None
SRR25827623 Pre-XDR-TB lineage2.2.1 None
ERR1163058 MDR-TB lineage4.8 None
ERR11774892 Pre-XDR-TB lineage4.4.1.1 None
ERR13266074 Pre-XDR-TB lineage3 None
SRR7781508 XDR-TB lineage4.1.2.1 None
SRR1049032 Pre-XDR-TB lineage2.2.1 None
ERR11082097 MDR-TB lineage4.1.2.1 None
DRR130113 Pre-XDR-TB lineage2.2.1 None
SRR14801592 Pre-XDR-TB lineage4.2.1 None
ERR2653145 Pre-XDR-TB lineage4.3.3 None
ERR8665884 MDR-TB lineage2.2.1 None
SRR7829582 Pre-XDR-TB lineage4.1.2.1 None
SRR28394263 Pre-XDR-TB lineage4.1.1 None
ERR13258494 Pre-XDR-TB lineage2.2.1 None
SRR29094437 Sensitive lineage4.3.2 None
SRR1003099 Pre-XDR-TB lineage2.2.1 None
SRR1003103 Pre-XDR-TB lineage2.2.1 None
SRR29274025 Pre-XDR-TB lineage4.2.1 None
SRR1013537 Pre-XDR-TB lineage2.2.1 None
ERR9907792 Pre-XDR-TB lineage4.3.4.1 None
SRR7592359 Pre-XDR-TB lineage4.8 None
SRR1048838 Pre-XDR-TB lineage2.2.1 None
ERR13285101 MDR-TB lineage4.2.1 None
ERR015611 Pre-XDR-TB lineage2.2.1 None
SRR29539313 Pre-XDR-TB lineage4.3.3 None
ERR10748120 Pre-XDR-TB lineage2.2.2 None
DRR130168 Pre-XDR-TB lineage2.2.1 None
SRR29274080 MDR-TB lineage4.1.2.1 None
SRR10525375 Pre-XDR-TB lineage4.1.2.1 None
SRR1049033 Pre-XDR-TB lineage2.2.1 None
SRR7069211 MDR-TB lineage4.1.2.1 None
DRR130241 Pre-XDR-TB lineage2.2.1 None
ERR13291072 MDR-TB lineage2.2.1 None
ERR11082954 MDR-TB lineage4.1.2.1 None
SRR29273806 MDR-TB lineage4.1.2.1 None
SRR25827790 XDR-TB lineage2.2.1;lineage3 None
ERR13261239 XDR-TB lineage3.1 None
SRR7592349 MDR-TB lineage4.1.2.1 None
ERR13276301 Pre-XDR-TB lineage2.2.1 None
SRR29055850 Pre-XDR-TB lineage2.2.2 None
ERR13285056 MDR-TB lineage4.1.2.1 None
ERR13285149 MDR-TB lineage4.3.3 None
ERR7361984 Pre-XDR-TB lineage4.3.3 None
ERR1035271 Pre-XDR-TB lineage4.3.4.2 br
SRR19304074 HR-TB lineage4.1.2.1 None
SRR28351388 XDR-TB lineage4.2.1 None
SRR28467020 Pre-XDR-TB lineage2.2.2 None
SRR11241400 Pre-XDR-TB lineage4.3.3 None
ERR11774887 Pre-XDR-TB lineage4.4.1.1 None
ERR7911607 Pre-XDR-TB lineage2.2.2 za
ERR1873552 Pre-XDR-TB lineage2.2.2 za
SRR6356944 Pre-XDR-TB lineage4.3.3;lineage4.8 None
SRR6356992 MDR-TB lineage4.3.3;lineage4.8 None
SRR7652975 Pre-XDR-TB lineage2.2.1 None
SRR10315624 Pre-XDR-TB lineage4.3.3 None
SRR1048835 Pre-XDR-TB lineage2.2.1 None
SRR25827629 Pre-XDR-TB lineage1.1.3.3;lineage2.2.1;lineage3 None
SRR19115700 MDR-TB lineage4.1.2.1 None
ERR8025709 Pre-XDR-TB lineage2.2.2 None
ERR11081434 Pre-XDR-TB lineage2.2.1 None
ERR5758429 Pre-XDR-TB lineage2.2.2 None
SRR29274118 Pre-XDR-TB lineage4.8 None
SRR7592380 Pre-XDR-TB lineage4.8 None
ERR8025420 Pre-XDR-TB lineage2.2.1 None
SRR6356938 MDR-TB lineage4.3.3;lineage4.8 None
ERR13194019 Pre-XDR-TB lineage2.2.2 None
SRR14801708 XDR-TB lineage4.2.1 None
SRR1048836 Pre-XDR-TB lineage2.2.1 None
SRR21276954 Pre-XDR-TB lineage2.2.1 None
ERR11773735 Pre-XDR-TB lineage4.4.1.1 None
SRR1013540 Pre-XDR-TB lineage2.2.1 None
SRR1144766 Pre-XDR-TB lineage2.2.1 None
ERR11081121 Pre-XDR-TB lineage4.7 None
SRR28339289 Pre-XDR-TB lineage2.2.1 None
SRR28339290 Pre-XDR-TB lineage2.2.1 None
SRR1013639 Pre-XDR-TB lineage2.2.1 None
SRR5486901 MDR-TB lineage4.1.2.1 None
ERR2516740 MDR-TB lineage4.1.2.1 gb
ERR2516693 Pre-XDR-TB lineage4.1.1 pe
ERR11067646 MDR-TB lineage4.3.3 None
SRR29274006 Pre-XDR-TB lineage4.8 None
ERR13266704 Pre-XDR-TB lineage2.2.1 None
SRR9971315 Pre-XDR-TB lineage4.3.3 None
SRR25827885 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR3743459 Pre-XDR-TB lineage4.2.1 None