Rv3423c - p.Thr20Met
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
23 MDR-TB
77 Pre-XDR-TB
9 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 41 |
| lineage4.1.2.1 | 19 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.2.1 | 8 |
| lineage4.1.1 | 3 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.3.3 | 8 |
| lineage4.8 | 4 |
| lineage2.2.2 | 7 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage3 | 2 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 26 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1013638 | Pre-XDR-TB | lineage2.2.1 | None | SRR7781508 | XDR-TB | lineage4.1.2.1 | None | ERR4828788 | XDR-TB | lineage4.1.2.1 | None | SRR25827629 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1;lineage3 | None | SAMN02398714 | Pre-XDR-TB | lineage2.2.1 | kr | ERR11774892 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28351388 | XDR-TB | lineage4.2.1 | None | SRR28394263 | Pre-XDR-TB | lineage4.1.1 | None | SRR6356944 | Pre-XDR-TB | lineage4.3.3;lineage4.8 | None | SRR10315624 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013538 | Pre-XDR-TB | lineage2.2.1 | None | SRR7592359 | Pre-XDR-TB | lineage4.8 | None | ERR1034809 | Pre-XDR-TB | lineage4.8 | pt | ERR8975810 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR5758429 | Pre-XDR-TB | lineage2.2.2 | None | ERR11043578 | MDR-TB | lineage4.2.1 | None | ERR4812984 | MDR-TB | lineage4.1.1 | pe | ERR9992746 | XDR-TB | lineage4.1.1.3 | None | SRR7069453 | MDR-TB | lineage4.1.2.1 | None | ERR4798697 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830743 | Pre-XDR-TB | lineage4.1.2 | dz | SAMN02360621 | Pre-XDR-TB | lineage2.2.1 | kr | SRR23310965 | Pre-XDR-TB | lineage4.2.1 | None | SRR7592330 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25827456 | MDR-TB | lineage2.2.1 | None | ERR11067646 | MDR-TB | lineage4.3.3 | None | SRR7592380 | Pre-XDR-TB | lineage4.8 | None | SRR1003103 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013539 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048839 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304074 | HR-TB | lineage4.1.2.1 | None | SRR7069211 | MDR-TB | lineage4.1.2.1 | None | ERR9907792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR14801592 | Pre-XDR-TB | lineage4.2.1 | None | ERR4799165 | Pre-XDR-TB | lineage3 | in | SRR1013540 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048838 | Pre-XDR-TB | lineage2.2.1 | None | SRR5486901 | MDR-TB | lineage4.1.2.1 | None | ERR7361984 | Pre-XDR-TB | lineage4.3.3 | None | ERR2514451 | MDR-TB | lineage4.1.2.1 | gb | DRR130241 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003099 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829121 | Other | lineage4.3.3 | it | SRR1049032 | Pre-XDR-TB | lineage2.2.1 | None | SRR28339289 | Pre-XDR-TB | lineage2.2.1 | None | SRR28339290 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773735 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11081434 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800059 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1013639 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315625 | Pre-XDR-TB | lineage4.3.3 | None | SRR19115700 | MDR-TB | lineage4.1.2.1 | None | SRR3743459 | Pre-XDR-TB | lineage4.2.1 | None | ERR7911607 | Pre-XDR-TB | lineage2.2.2 | za | SRR10869269 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035271 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR4822358 | Pre-XDR-TB | lineage2.2.1 | None | ERR1163058 | MDR-TB | lineage4.8 | None | SRR1144766 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510676 | MDR-TB | lineage4.1.2.1 | it | ERR4822585 | Pre-XDR-TB | lineage2.2.1 | tm | ERR11043129 | MDR-TB | lineage4.2.1 | None | SAMN02360549 | Pre-XDR-TB | lineage2.2.1 | kr | DRR130168 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510729 | Pre-XDR-TB | lineage4.1.2.1 | it | SRR23340105 | Pre-XDR-TB | lineage2.2.1 | None | SRR11241400 | Pre-XDR-TB | lineage4.3.3 | None | ERR5917967 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR1048835 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514559 | MDR-TB | lineage4.1.2.1 | gb | SRR10525375 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR015611 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738483 | MDR-TB | lineage4.1.2.1 | None | SRR21276954 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356938 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR11081339 | MDR-TB | lineage4.2.1 | None | ERR10748120 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827790 | XDR-TB | lineage2.2.1;lineage3 | None | SAMN02360622 | Pre-XDR-TB | lineage2.2.1 | kr | SRR25827623 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873552 | Pre-XDR-TB | lineage2.2.2 | za | ERR2653145 | Pre-XDR-TB | lineage4.3.3 | None | SRR25827885 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR8975016 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360598 | Pre-XDR-TB | lineage2.2.1 | kr | ERR11082097 | MDR-TB | lineage4.1.2.1 | None | ERR4799690 | XDR-TB | lineage2.2.1 | in | ERR8665884 | MDR-TB | lineage2.2.1 | None | DRR130113 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992839 | XDR-TB | lineage4.1.1.3 | None | SRR28467020 | Pre-XDR-TB | lineage2.2.2 | None | ERR11774887 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971315 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356992 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR7652975 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025709 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576538 | MDR-TB | lineage2.2.1 | None | ERR2516693 | Pre-XDR-TB | lineage4.1.1 | pe | SRR25827747 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR1003102 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360548 | Pre-XDR-TB | lineage2.2.1 | kr | SRR24466751 | MDR-TB | lineage4.1.2.1 | None | ERR2515133 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR8025420 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516740 | MDR-TB | lineage4.1.2.1 | gb | SRR1049033 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081121 | Pre-XDR-TB | lineage4.7 | None | SRR14801708 | XDR-TB | lineage4.2.1 | None | SRR7829582 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7592349 | MDR-TB | lineage4.1.2.1 | None |
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