Rv3457c - c.-111A>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
31 Sensitive
2 RR-TB
13 HR-TB
25 MDR-TB
19 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 45 |
| lineage4.1.2.1 | 9 |
| lineage2.2.2 | 5 |
| lineage3 | 4 |
| lineage4.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.3 | 7 |
| lineage2.2.1.1 | 4 |
| lineage4.4.2 | 4 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 1 |
| lineage4.9 | 7 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.1;lineage2.2.1.2;lineage3 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.5 | 3 |
| La1.7.1 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20958154 | Sensitive | lineage4.3.4.2 | None | SRR21887779 | MDR-TB | lineage2.2.1 | None | SRR26800438 | Sensitive | lineage4.1.2.1 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | SRR28119799 | Sensitive | lineage2.2.1 | None | SRR28119804 | Other | lineage2.2.1 | None | SRR25206893 | MDR-TB | lineage2.2.1 | None | SRR20958084 | Other | lineage4.1.2.1 | None | SRR26800432 | Sensitive | lineage3 | None | SRR21887651 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887716 | MDR-TB | lineage4.2.2 | None | SRR28465663 | Sensitive | lineage1.2.1.2.1 | None | SRR27069437 | MDR-TB | lineage2.2.1 | None | SRR28046129 | RR-TB | lineage1.1.3.3 | None | SRR26442320 | Sensitive | lineage4.1.2.1 | None | SRR21887767 | MDR-TB | lineage2.2.1 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | SRR27069432 | MDR-TB | lineage2.2.1 | None | SRR28046104 | Sensitive | lineage3 | None | SRR23316625 | Sensitive | lineage2.2.1 | None | SRR23316641 | HR-TB | lineage2.2.1 | None | SRR28467037 | HR-TB | lineage2.2.2 | None | SRR20958113 | Sensitive | lineage4.3.3 | None | SRR27069391 | MDR-TB | lineage2.2.1.1 | None | SRR27069457 | MDR-TB | lineage2.2.1 | None | SRR21887707 | Pre-XDR-TB | lineage2.2.1 | None | SRR23316601 | HR-TB | lineage2.2.1 | None | SRR27069465 | MDR-TB | lineage4.4.2 | None | SRR25827368 | XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR23316622 | HR-TB | lineage2.2.1 | None | SRR21887673 | MDR-TB | lineage2.2.1 | None | SRR23961544 | Other | La1.2 | None | SRR21887646 | MDR-TB | lineage2.2.1 | None | SRR25827784 | MDR-TB | lineage1.2.2.2 | None | SRR28119802 | Other | lineage2.2.1 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827478 | MDR-TB | lineage4.8 | None | SRR25905994 | MDR-TB | lineage4.3.3 | None | SRR25524716 | Sensitive | lineage4.9 | None | SRR23650982 | HR-TB | lineage4.9 | None | SRR21700917 | Other | lineage4.9 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR27069453 | Pre-XDR-TB | lineage2.2.1 | None | SRR23316609 | HR-TB | lineage1.2.1.2 | None | SRR27069418 | MDR-TB | lineage2.2.1.1 | None | SRR25206902 | MDR-TB | lineage2.2.1 | None | SRR25207178 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR20958150 | Sensitive | lineage4.3.3 | None | SRR27069433 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119740 | Sensitive | lineage2.2.1 | None | SRR25207260 | MDR-TB | lineage2.2.1 | None | SRR23316612 | HR-TB | lineage2.2.1 | None | SRR27069398 | MDR-TB | lineage2.2.1.1 | None | SRR27069421 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887677 | MDR-TB | lineage2.2.1 | None | SRR25827356 | Pre-XDR-TB | lineage2.2.1.1;lineage2.2.1.2;lineage3 | None | SRR25207266 | Pre-XDR-TB | lineage4.4.2 | None | SRR20958130 | Sensitive | lineage4.3.3;lineage4.9 | None | SRR20958081 | Sensitive | lineage4.3.3 | None | SRR21887729 | Pre-XDR-TB | lineage2.2.1 | None | SRR26800460 | Sensitive | lineage3 | None | SRR25206907 | Pre-XDR-TB | lineage2.2.1 | None | SRR23316634 | HR-TB | lineage4.5 | None | SRR23316603 | Other | lineage2.2.1 | None | SRR27069445 | Other | lineage2.2.1 | None | SRR25207306 | Pre-XDR-TB | lineage2.2.1 | None | SRR20958112 | Sensitive | lineage4.1.2.1 | None | SRR28119824 | Sensitive | lineage2.2.1 | None | SRR20958114 | Sensitive | lineage4.3.3 | None | SRR23961539 | Other | La1.7.1 | None | SRR23316618 | Other | lineage2.2.1 | None | SRR28119771 | Sensitive | lineage2.2.1 | None | SRR28467052 | HR-TB | lineage2.2.1 | None | SRR25628560 | HR-TB | lineage4.5 | None | SRR28467060 | HR-TB | lineage2.2.1 | None | SRR27069435 | MDR-TB | lineage2.2.1 | None | SRR23316633 | HR-TB | lineage2.2.1 | None | SRR23650985 | Sensitive | lineage4.9 | None | SRR21700856 | Sensitive | lineage4.9 | None | SRR21700853 | RR-TB | lineage4.9 | None | SRR20958132 | Sensitive | lineage4.9 | None | SRR26800481 | Sensitive | lineage3 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | SRR20958117 | Sensitive | lineage4.1.2.1 | None | SRR27069406 | Pre-XDR-TB | lineage4.4.2 | None | SRR27069364 | Pre-XDR-TB | lineage2.2.1 | None | SRR20958093 | Sensitive | lineage4.3.3 | None | SRR28044385 | Sensitive | lineage1.1.2 | None | SRR27069434 | MDR-TB | lineage2.2.1 | None | SRR27069419 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069417 | Pre-XDR-TB | lineage2.2.1 | None | SRR26442319 | Sensitive | lineage4.1.2.1 | None | SRR27069429 | MDR-TB | lineage2.2.1 | None | SRR20958144 | Sensitive | lineage4.3.3 | None | SRR20958110 | Sensitive | lineage4.1.2.1 | None | SRR25628580 | Sensitive | lineage4.5 | None | SRR25207186 | MDR-TB | lineage2.2.1 | None | SRR27069389 | MDR-TB | lineage4.4.2 | None | SRR20958078 | Sensitive | lineage4.1.2.1 | None | SRR28119737 | Other | lineage2.2.1 | None | SRR21859818 | HR-TB | lineage4.1.2.1 | None |
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