Rv3457c - c.-124_-53delCGAGTACCCCCCAACCCAACCCTCGGGGGGCGCCGCCCCCCGAGTACCCCCACCCTCGGGGGCGCCGCCCCC
Drug resistance types
14 Sensitive
0 RR-TB
3 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
112 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2 | 7 |
| La1.8.1 | 90 |
| lineage4.3.2 | 1 |
| lineage4.4.1 | 1 |
| La1.2.BCG | 2 |
| La1.7.1 | 8 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage2.2.1 | 6 |
| lineage1.2.1.2.1 | 2 |
| La2 | 1 |
| lineage1.1.1 | 2 |
| lineage5.3 | 2 |
| lineage4.3.3 | 2 |
| La1.3 | 2 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6337347 | Other | La1.2 | None | ERR6337351 | Other | La1.2 | None | ERR6338356 | Other | La1.2 | None | ERR6337401 | Other | La1.2 | None | SRR11462874 | Other | La1.8.1 | None | SRR11294522 | Other | La1.8.1 | None | SRR11294526 | Other | La1.8.1 | None | ERR9786900 | Sensitive | lineage4.3.2 | None | SRR11462869 | Other | La1.8.1 | None | SRR14296089 | Other | La1.8.1 | None | SRR13180295 | HR-TB | lineage4.4.1 | None | SRR13180338 | Other | La1.2.BCG | None | SRR14001970 | Other | La1.7.1 | None | SRR11462935 | Other | La1.8.1 | None | SRR13180238 | HR-TB | lineage4.1.2.1 | None | SRR13180318 | Other | La1.2.BCG | None | SRR13199732 | Other | La1.7.1 | None | SRR14001964 | Other | La1.7.1 | None | SRR14296144 | Other | La1.8.1 | None | SRR14296141 | Other | La1.8.1 | None | SRR14296240 | Other | La1.8.1 | None | SRR14296236 | Other | La1.8.1 | None | SRR14296253 | Other | La1.8.1 | None | SRR14296246 | Other | La1.8.1 | None | SRR14296336 | Other | La1.8.1 | None | SRR14296258 | Other | La1.8.1 | None | SRR14296251 | Other | La1.8.1 | None | SRR14296270 | Other | La1.8.1 | None | SRR14296298 | Other | La1.8.1 | None | SRR14296338 | Other | La1.8.1 | None | SRR14296333 | Other | La1.8.1 | None | SRR14296344 | Other | La1.8.1 | None | SRR14296409 | Other | La1.8.1 | None | SRR14296348 | Other | La1.8.1 | None | SRR14296372 | Other | La1.8.1 | None | SRR14296407 | Other | La1.8.1 | None | SRR14296373 | Other | La1.8.1 | None | SRR15296966 | Other | La1.7.1 | None | SRR16370259 | Sensitive | lineage4.3.4.1 | None | SRR16101262 | Sensitive | lineage2.2.1 | None | SRR1791715 | Other | La1.8.1 | None | SRR16370273 | Other | lineage1.2.1.2.1 | None | SRR17111226 | Sensitive | La2 | None | SRR1791855 | Other | La1.8.1 | None | SRR1791718 | Other | La1.8.1 | None | SRR1791786 | Other | La1.8.1 | None | SRR1791815 | Other | La1.8.1 | None | SRR1791823 | Other | La1.8.1 | None | SRR1791834 | Other | La1.8.1 | None | SRR1791761 | Other | La1.8.1 | None | SRR1791770 | Other | La1.8.1 | None | SRR1791808 | Other | La1.8.1 | None | SRR1792010 | Other | La1.8.1 | None | SRR1791925 | Other | La1.8.1 | None | SRR1792001 | Other | La1.8.1 | None | SRR1791892 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792014 | Other | La1.8.1 | None | SRR1792063 | Other | La1.8.1 | None | SRR1792049 | Other | La1.8.1 | None | SRR1792071 | Other | La1.8.1 | None | SRR1792113 | Other | La1.8.1 | None | SRR1792060 | Other | La1.8.1 | None | SRR1792136 | Other | La1.8.1 | None | SRR1792123 | Other | La1.8.1 | None | SRR1792129 | Other | La1.8.1 | None | SRR1792133 | Other | La1.8.1 | None | SRR1792130 | Other | La1.8.1 | None | SRR1792121 | Other | La1.8.1 | None | SRR1792148 | Other | La1.8.1 | None | SRR1792183 | Other | La1.8.1 | None | SRR1792152 | Other | La1.8.1 | None | SRR1792179 | Other | La1.8.1 | None | SRR1792150 | Other | La1.8.1 | None | SRR1792171 | Other | La1.7.1 | None | SRR1792181 | Other | La1.8.1 | None | SRR1792307 | Other | La1.8.1 | None | SRR1792218 | Other | La1.7.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR1792301 | Other | La1.8.1 | None | SRR1792269 | Other | La1.8.1 | None | SRR1792305 | Other | La1.8.1 | None | SRR1792319 | Other | La1.8.1 | None | SRR1792316 | Other | La1.8.1 | None | SRR1792330 | Other | La1.8.1 | None | SRR1792400 | Other | La1.8.1 | None | SRR1792362 | Other | La1.8.1 | None | SRR1792376 | Other | La1.8.1 | None | SRR1792412 | Other | La1.8.1 | None | SRR1792485 | Other | La1.2 | None | SRR1792447 | Other | La1.8.1 | None | SRR1792427 | Other | La1.8.1 | None | SRR19158671 | Sensitive | lineage4.3.4.1 | None | SRR18053779 | Other | La1.7.1 | None | SRR18914184 | Other | La1.8.1 | None | SRR19158661 | Other | lineage1.2.1.2.1 | None | SRR20551034 | Other | La1.7.1 | None | SRR19325550 | Sensitive | lineage2.2.1 | None | SRR19325560 | Sensitive | lineage1.1.1 | None | SRR19325667 | Sensitive | lineage1.1.1 | None | ERR11068991 | MDR-TB | lineage5.3 | None | SRR23174192 | Other | La1.8.1 | None | SRR23174308 | Other | La1.8.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR23174312 | Other | La1.8.1 | None | SRR5486072 | Other | La1.2 | None | SRR3091235 | Other | La1.8.1 | None | SRR3135072 | Other | La1.8.1 | None | SRR5817668 | Other | La1.8.1 | None | SRR5486074 | Other | La1.2 | None | SRR5817676 | Other | La1.8.1 | None | SRR5817717 | Other | La1.8.1 | None | SRR5817703 | Other | La1.8.1 | None | SRR5817689 | Other | La1.8.1 | None | SRR5817697 | Other | La1.8.1 | None | SRR8073604 | Other | La1.8.1 | None | SRR6855990 | Sensitive | lineage4.3.3 | None | SRR8065070 | Other | La1.3 | None | SRR8065079 | Other | La1.3 | None | ERR3132099 | HR-TB | lineage2.2.2 | None | SRR6896292 | Sensitive | lineage4.3.4.1 | None | SRR6982210 | Sensitive | lineage2.2.1 | None | SRR8073602 | Other | La1.8.1 | None | SRR8073614 | Other | La1.8.1 | None | SRR8073639 | Other | La1.8.1 | None | DRR034471 | Sensitive | lineage2.2.1 | None | SRR8073654 | Other | La1.8.1 | None | DRR034527 | Other | lineage2.2.1 | None | ERR3639810 | MDR-TB | lineage5.3 | None | ERR4195682 | Sensitive | lineage2.2.1 | None |
|---|
