Rv3457c - p.Gly31Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
3 HR-TB
123 MDR-TB
60 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 8 |
| lineage2.2.1 | 136 |
| lineage1.1.2 | 4 |
| lineage1.2.2.2 | 4 |
| lineage1.2.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9 | 2 |
| lineage4.3.3 | 20 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1;lineage3;lineage4.3.2 | 1 |
| lineage4.5 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.1 | 3 |
| lineage3.1.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 191 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4553567 | MDR-TB | lineage2.2.1 | None | ERR13281474 | MDR-TB | lineage2.2.1 | None | SRR21887681 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964619 | MDR-TB | lineage1.1.2 | None | ERR4796454 | MDR-TB | lineage1.2.2.2 | in | ERR4796690 | Pre-XDR-TB | lineage2.2.1 | in | SRR5153313 | MDR-TB | lineage2.2.1 | None | ERR13290885 | Pre-XDR-TB | lineage1.2.1.2 | None | SRR23340101 | MDR-TB | lineage2.2.1 | None | ERR13284383 | MDR-TB | lineage2.2.1 | None | ERR3794536 | MDR-TB | lineage2.2.1 | None | SRR15316196 | RR-TB | lineage4.4.2 | None | SRR29231749 | MDR-TB | lineage4.9 | None | SAMN02414967 | MDR-TB | lineage2.2.1 | se | ERR4553895 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043888 | MDR-TB | lineage4.3.3 | None | SRR28706592 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706551 | MDR-TB | lineage2.2.1 | None | SRR10040454 | MDR-TB | lineage2.2.1 | None | ERR7911535 | Pre-XDR-TB | lineage2.2.1 | za | ERR13290592 | MDR-TB | lineage2.2.1 | None | ERR4811281 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911517 | MDR-TB | lineage2.2.1 | vn | ERR751510 | MDR-TB | lineage4.1.1.3 | pe | ERR751502 | MDR-TB | lineage4.1.1.3 | pe | ERR502884 | MDR-TB | lineage2.2.1 | None | ERR4830580 | MDR-TB | lineage2.2.1 | tm | SRR4423162 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307601 | MDR-TB | lineage2.2.1 | None | ERR13284835 | MDR-TB | lineage2.2.1 | None | SRR29772503 | MDR-TB | lineage1.1.2 | None | ERR3794537 | MDR-TB | lineage2.2.1 | None | SAMN02419668 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419616 | Pre-XDR-TB | lineage2.2.1 | by | ERR13276148 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937030 | MDR-TB | lineage2.2.1.1 | None | SRR1169096 | Pre-XDR-TB | lineage2.2.1 | None | SRR8329334 | MDR-TB | lineage2.2.1 | None | ERR3794547 | MDR-TB | lineage2.2.1 | None | SRR27069436 | MDR-TB | lineage2.2.1 | None | ERR5917745 | Pre-XDR-TB | lineage2.2.1 | by | ERR5866097 | MDR-TB | lineage2.2.1 | None | ERR4830609 | MDR-TB | lineage2.2.1 | tm | SRR1165604 | MDR-TB | lineage2.2.1 | None | SRR11662606 | MDR-TB | lineage1.1.1 | None | SRR14801432 | MDR-TB | lineage2.2.1 | None | SRR26937080 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723655 | MDR-TB | lineage2.2.1 | cn | SRR25827509 | MDR-TB | lineage2.2.1;lineage3;lineage4.3.2 | None | SRR29356715 | MDR-TB | lineage2.2.1 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR4423154 | Pre-XDR-TB | lineage2.2.1 | None | SRR29356671 | MDR-TB | lineage2.2.1 | None | ERR13290590 | MDR-TB | lineage2.2.1 | None | SRR1169116 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163104 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794419 | MDR-TB | lineage2.2.1 | None | SRR24709934 | Pre-XDR-TB | lineage2.2.1 | None | SRR21747035 | MDR-TB | lineage4.5 | None | ERR3794395 | MDR-TB | lineage2.2.1 | None | ERR13284757 | MDR-TB | lineage2.2.1 | None | ERR8025658 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002878 | MDR-TB | lineage2.2.1 | None | SRR24710148 | MDR-TB | lineage2.2.1 | None | SRR28393992 | MDR-TB | lineage4.3.3 | None | ERR13284387 | MDR-TB | lineage2.2.1 | None | ERR5865841 | Pre-XDR-TB | lineage4.3.3 | None | SRR24709909 | MDR-TB | lineage2.2.1 | None | ERR4797296 | MDR-TB | lineage1.2.2.2 | in | ERR5865842 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062847 | MDR-TB | lineage4.3.3 | None | SRR5338514 | MDR-TB | lineage1.2.1.2.1 | None | ERR13266544 | MDR-TB | lineage3 | None | SRR29017401 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714892 | MDR-TB | lineage2.2.1 | None | SAMN02350434 | MDR-TB | lineage4.3.3 | za | SRR1163431 | Pre-XDR-TB | lineage2.2.1 | None | SRR671801 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28706386 | MDR-TB | lineage2.2.1 | None | SRR28706659 | MDR-TB | lineage2.2.1 | None | ERR4830572 | MDR-TB | lineage2.2.1 | tm | SRR18715040 | MDR-TB | lineage2.2.1 | None | SRR6257035 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887699 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044493 | Pre-XDR-TB | lineage2.2.1 | None | ERR144635 | MDR-TB | lineage2.2.1 | ru | SRR12420472 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710232 | MDR-TB | lineage2.2.1 | None | SRR28351392 | MDR-TB | lineage4.3.3 | None | ERR13284841 | MDR-TB | lineage2.2.1 | None | SRR29978524 | MDR-TB | lineage2.2.1 | None | SRR21576645 | RR-TB | lineage2.2.1 | None | ERR13276354 | MDR-TB | lineage2.2.1 | None | ERR4553938 | MDR-TB | lineage2.2.1 | None | ERR4830127 | MDR-TB | lineage2.2.1 | None | ERR13261667 | MDR-TB | lineage4.3.3 | None | ERR4553921 | MDR-TB | lineage2.2.1 | None | SRR28860044 | MDR-TB | lineage2.2.1 | None | SRR23938605 | MDR-TB | lineage2.2.1 | None | ERR11043686 | MDR-TB | lineage2.2.1 | None | SRR1184321 | MDR-TB | lineage4.3.3 | None | SRR13232470 | MDR-TB | lineage2.2.1 | None | SRR1173000 | MDR-TB | lineage4.3.3 | None | SRR20969411 | MDR-TB | lineage2.2.1 | None | SRR29772518 | MDR-TB | lineage1.1.2 | None | SRR29017051 | Pre-XDR-TB | lineage2.2.1 | None | SRR15465767 | MDR-TB | lineage2.2.1 | None | SRR10430347 | MDR-TB | lineage2.2.1 | None | ERR3794377 | MDR-TB | lineage2.2.1 | None | SRR1163135 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993093 | MDR-TB | lineage4.3.3 | None | ERR11082679 | MDR-TB | lineage2.2.1 | None | ERR11043889 | MDR-TB | lineage4.3.3 | None | SRR12420506 | MDR-TB | lineage2.2.1 | None | SRR29017572 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938667 | MDR-TB | lineage2.2.1 | None | ERR4553625 | MDR-TB | lineage2.2.1 | None | SRR10303318 | MDR-TB | lineage2.2.1 | None | SRR24709964 | MDR-TB | lineage2.2.1 | None | SRR1011476 | MDR-TB | lineage4.3.3 | None | ERR13284034 | MDR-TB | lineage2.2.1 | None | SRR27069444 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017649 | MDR-TB | lineage2.2.1 | None | ERR11082602 | MDR-TB | lineage2.2.1 | None | ERR4553585 | MDR-TB | lineage2.2.1 | None | SRR4423171 | Pre-XDR-TB | lineage2.2.1 | None | SRR24673520 | MDR-TB | lineage4.2.1 | None | SRR1196492 | MDR-TB | lineage4.3.3 | None | SRR8651656 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2706987 | MDR-TB | lineage4.9 | cd | ERR552237 | XDR-TB | lineage2.2.1 | None | ERR5865507 | MDR-TB | lineage4.2.1 | None | ERR4811185 | Pre-XDR-TB | lineage4.5 | cn | SRR6832337 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351204 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11773809 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706405 | MDR-TB | lineage2.2.1 | None | SRR1163318 | Pre-XDR-TB | lineage2.2.1 | None | SRR19320518 | MDR-TB | lineage3.1.2 | None | ERR4812828 | HR-TB | lineage4.3.3 | None | ERR718215 | MDR-TB | lineage2.2.1 | th | SRR28706650 | MDR-TB | lineage2.2.1 | None | ERR4812994 | Pre-XDR-TB | lineage4.1.1 | None | ERR2516750 | Pre-XDR-TB | lineage3 | gb | ERR2516947 | Pre-XDR-TB | lineage3 | gb | ERR551494 | MDR-TB | lineage2.2.1 | tm | SRR5341436 | Pre-XDR-TB | lineage3 | in | SRR5341355 | Pre-XDR-TB | lineage3 | in | SRR5341450 | Pre-XDR-TB | lineage3 | in | SRR6824705 | MDR-TB | lineage2.2.1 | cn | SRR6824453 | MDR-TB | lineage2.2.1 | cn | SRR1166869 | MDR-TB | lineage2.2.1 | None | SRR12420613 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207078 | Pre-XDR-TB | lineage2.2.1 | None | ERR550916 | XDR-TB | lineage2.2.1 | None | SRR29055926 | MDR-TB | lineage3.1.2 | None | SRR28351157 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4553551 | MDR-TB | lineage2.2.1 | None | SRR23340092 | MDR-TB | lineage2.2.1 | None | SAMN02586097 | MDR-TB | lineage4.3.3 | za | ERR13288983 | MDR-TB | lineage4.3.3 | None | SRR1162811 | MDR-TB | lineage2.2.1 | None | ERR9993125 | MDR-TB | lineage4.8.1 | None | ERR5865506 | MDR-TB | lineage4.2.1 | None | ERR3794438 | MDR-TB | lineage2.2.1 | None | SRR12420623 | Pre-XDR-TB | lineage2.2.1 | None | SRR22528586 | MDR-TB | lineage4.3.3 | None | SRR15506903 | HR-TB | lineage2.2.1 | None | SRR29772574 | RR-TB | lineage3 | None | SRR10040229 | MDR-TB | lineage2.2.1 | None | SRR12420512 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290593 | MDR-TB | lineage2.2.1 | None | SRR23861820 | MDR-TB | lineage4.3.3 | None | SRR29017426 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067670 | MDR-TB | lineage2.2.1 | None | SRR29017343 | MDR-TB | lineage2.2.1 | None | ERR13290591 | MDR-TB | lineage2.2.1 | None | ERR4553560 | MDR-TB | lineage2.2.1 | None | SRR1165502 | MDR-TB | lineage2.2.1 | None | SRR25207356 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172383 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420404 | MDR-TB | lineage2.2.1 | None | SRR13232701 | Pre-XDR-TB | lineage2.2.1 | None | SRR24828601 | Pre-XDR-TB | lineage2.2.1 | None | SRR1002678 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR29016851 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772699 | MDR-TB | lineage1.1.2 | None | SRR1172231 | Pre-XDR-TB | lineage2.2.1 | None |
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