lineage | Count |
---|---|
lineage2.2.1 | 56 |
lineage3 | 7 |
lineage4.4.1.1 | 1 |
lineage4.3.4.2 | 4 |
lineage4.6.1.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4 | 2 |
lineage4.6.2.2 | 1 |
lineage4.3.3 | 2 |
lineage2.2 | 3 |
lineage5.2 | 1 |
lineage4.3.2 | 1 |
lineage2.2.2 | 1 |
lineage4.8 | 1 |
lineage4.2.2 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 | ERR4011060 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553803 | Pre-XDR-TB | lineage3 | None | ERR4423714 | MDR-TB | lineage4.4.1.1 | None | ERR4553724 | Pre-XDR-TB | lineage3 | None | ERR4423720 | MDR-TB | lineage4.3.4.2 | None | ERR5864727 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797440 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798581 | MDR-TB | lineage3 | in | ERR5866586 | MDR-TB | lineage2.2.1 | None | ERR5865935 | MDR-TB | lineage2.2.1 | None | ERR7911107 | MDR-TB | lineage2.2.1 | vn | ERR5866587 | MDR-TB | lineage2.2.1 | None | ERR7737719 | MDR-TB | lineage2.2.1 | None | ERR7737833 | MDR-TB | lineage2.2.1 | None | ERR6358790 | MDR-TB | lineage4.6.1.2 | None | ERR7362004 | MDR-TB | lineage2.2.1 | None | ERR760853 | MDR-TB | lineage4.1.2.1.1 | ar | ERR7737803 | MDR-TB | lineage2.2.1 | None | ERR8774401 | MDR-TB | lineage4.3.4.2 | None | ERR7911124 | MDR-TB | lineage2.2.1 | vn | ERR7911133 | MDR-TB | lineage2.2.1 | None | ERR7911698 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911592 | Pre-XDR-TB | lineage2.2.1 | za | SRR10305699 | MDR-TB | lineage2.2.1 | None | ERR9125282 | MDR-TB | lineage2.2.1 | None | ERR9907794 | MDR-TB | lineage4.3.4.1 | None | ERR9993134 | MDR-TB | lineage3 | None | ERR8774578 | MDR-TB | lineage2.2.1 | None | SRR18714922 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808688 | Pre-XDR-TB | lineage4 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156836 | MDR-TB | lineage2.2.1 | None | SRR10380050 | MDR-TB | lineage2.2.1 | None | SRR10869246 | MDR-TB | lineage2.2.1 | None | SRR16058382 | MDR-TB | lineage2.2.1 | None | SRR16156816 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370502 | MDR-TB | lineage2.2.1 | None | ERR9806923 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025494 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806664 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025726 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806609 | MDR-TB | lineage2.2.1 | None | ERR8025737 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | ERR10610276 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806906 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610183 | MDR-TB | lineage2.2.1 | None | ERR2124089 | MDR-TB | lineage2.2.1 | None | ERR1873412 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446586 | MDR-TB | lineage2.2.1 | nl | ERR1679633 | MDR-TB | lineage4.6.2.2 | None | ERR4817440 | Other | lineage4.3.3 | None | ERR2184337 | Pre-XDR-TB | lineage4 | None | SRR3743410 | MDR-TB | lineage2.2.1 | None | ERR3275274 | MDR-TB | lineage2.2.1 | nl | ERR2510274 | Pre-XDR-TB | lineage3 | pk | ERR1873457 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516861 | MDR-TB | lineage2.2.1 | gb | ERR2516138 | MDR-TB | lineage2.2.1 | None | ERR2516239 | MDR-TB | lineage2.2.1 | be | ERR2517333 | MDR-TB | lineage2.2.1 | nl | SRR20970049 | HR-TB | lineage2.2 | None | ERR2707199 | MDR-TB | lineage4.3.4.2 | cd | ERR2706974 | MDR-TB | lineage4.3.4.2 | cd | SRR23340063 | MDR-TB | lineage2.2 | None | SRR23310817 | MDR-TB | lineage2.2 | None | ERR4831446 | Pre-XDR-TB | lineage3 | None | ERR2707002 | MDR-TB | lineage5.2 | cd | ERR4828861 | Pre-XDR-TB | lineage3 | None | SRR6832265 | MDR-TB | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4831641 | MDR-TB | lineage2.2.1 | vn | SRR6964525 | Pre-XDR-TB | lineage2.2.1 | None | SRR8327859 | MDR-TB | lineage2.2.1 | None | SRR6964544 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132227 | MDR-TB | lineage2.2.1 | None | ERR3273122 | MDR-TB | lineage2.2.2 | None | SRR8651595 | MDR-TB | lineage2.2.1 | cn | ERR11044054 | MDR-TB | lineage4.8 | None | ERR1034688 | Pre-XDR-TB | lineage4.2.2 | in | ERR11043509 | MDR-TB | lineage2.2.1 | None | ERR3287789 | MDR-TB | lineage4.3.3 | pe | ERR3273140 | MDR-TB | lineage2.2.1 | None | ERR3794355 | Pre-XDR-TB | lineage2.2.1 | None |
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