lineage | Count |
---|---|
lineage2.2.1 | 81 |
lineage4.3.3 | 4 |
lineage4.2.2 | 2 |
2 | |
lineage3 | 10 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2 | 5 |
lineage4 | 3 |
lineage2.2.1;lineage4 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.2 | 1 |
lineage5.2 | 1 |
lineage4.8 | 1 |
lineage4.1.2.1.1 | 1 |
lineage2.2.2 | 1 |
lineage4.6.1.2 | 1 |
spoligotype | Count |
---|---|
None | 116 |
ID | Drug resistance | Lineage | Country iso2 | SRR24799244 | MDR-TB | lineage2.2.1 | None | ERR10762363 | MDR-TB | lineage4.3.3 | None | SRR6964544 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255880 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869246 | MDR-TB | lineage2.2.1 | None | ERR7362004 | MDR-TB | lineage2.2.1 | None | ERR1873412 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156836 | MDR-TB | lineage2.2.1 | None | ERR7737719 | MDR-TB | lineage2.2.1 | None | ERR2516239 | MDR-TB | lineage2.2.1 | be | SRR23340063 | MDR-TB | lineage2.2.1 | None | ERR1034688 | Pre-XDR-TB | lineage4.2.2 | in | ERR1873457 | Pre-XDR-TB | lineage2.2.1 | za | SRR6964525 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866587 | MDR-TB | lineage2.2.1 | None | ERR4553803 | Pre-XDR-TB | None | SRR28119712 | MDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | ERR2510274 | Pre-XDR-TB | lineage3 | pk | SRR29385276 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865935 | MDR-TB | lineage2.2.1 | None | ERR9907794 | MDR-TB | lineage4.3.4.1 | None | SRR12420742 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266775 | MDR-TB | lineage2.2.1 | None | ERR4423720 | MDR-TB | lineage4.3.4.2 | None | ERR5866586 | HR-TB | lineage2.2.1 | None | ERR4011060 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831446 | Pre-XDR-TB | lineage3 | None | ERR11798561 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292577 | MDR-TB | lineage4.3.3 | None | ERR3273140 | MDR-TB | lineage2.2.1 | None | SRR8651595 | MDR-TB | lineage2.2.1 | cn | ERR2184337 | Pre-XDR-TB | lineage4 | None | SRR26937045 | MDR-TB | lineage2.2.1;lineage4 | None | SRR24256008 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423714 | MDR-TB | lineage4.4.1.1 | None | SRR10040283 | MDR-TB | lineage2.2.1 | None | SRR16087912 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714922 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056341 | MDR-TB | lineage2.2.1 | None | ERR13266833 | Pre-XDR-TB | lineage3 | None | SRR24256044 | MDR-TB | lineage4.3.3 | None | SRR28044688 | XDR-TB | lineage3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR4423166 | Pre-XDR-TB | lineage3 | None | SRR6832265 | MDR-TB | lineage2.2.1 | None | SRR25827386 | MDR-TB | lineage4.2.2 | None | SRR28706481 | MDR-TB | lineage2.2.1 | None | ERR4798581 | MDR-TB | lineage3 | in | SRR24709954 | MDR-TB | lineage2.2.1 | None | ERR2446586 | MDR-TB | lineage2.2.1 | nl | ERR8025726 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709919 | MDR-TB | lineage2.2.1 | None | SRR20970049 | MDR-TB | lineage2.2.1 | None | ERR2707002 | MDR-TB | lineage5.2 | cd | ERR4831641 | MDR-TB | lineage2.2.1 | vn | ERR4828861 | Pre-XDR-TB | lineage3 | None | ERR4553724 | Pre-XDR-TB | None | ERR7911124 | MDR-TB | lineage2.2.1 | vn | SRR8327859 | MDR-TB | lineage2.2.1 | None | SRR24256315 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797440 | Pre-XDR-TB | lineage2.2.1 | in | SRR13870374 | Pre-XDR-TB | lineage4 | None | ERR7911133 | MDR-TB | lineage2.2.1 | None | ERR13266832 | Pre-XDR-TB | lineage3 | None | ERR11044054 | MDR-TB | lineage4.8 | None | ERR3132227 | MDR-TB | lineage2.2.1 | None | ERR9806664 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380050 | MDR-TB | lineage2.2.1 | None | SRR16088407 | Pre-XDR-TB | lineage2.2.1 | None | ERR760853 | MDR-TB | lineage4.1.2.1.1 | ar | SRR3743410 | MDR-TB | lineage2.2.1 | None | SRR10305699 | MDR-TB | lineage2.2.1 | None | ERR9806923 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707199 | MDR-TB | lineage4.3.4.2 | cd | ERR9993134 | MDR-TB | lineage3 | None | ERR3273122 | MDR-TB | lineage2.2.2 | None | SRR25206922 | MDR-TB | lineage2.2.1 | None | SRR10040137 | MDR-TB | lineage2.2.1 | None | ERR8025494 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310817 | MDR-TB | lineage2.2.1 | None | ERR3287789 | MDR-TB | lineage4.3.3 | pe | ERR2516138 | MDR-TB | lineage2.2.1 | None | SRR29231693 | MDR-TB | lineage4.3.4.2 | None | ERR2124089 | MDR-TB | lineage2.2.1 | None | ERR7911107 | MDR-TB | lineage2.2.1 | vn | ERR11798527 | MDR-TB | lineage2.2.1 | None | ERR6358790 | MDR-TB | lineage4.6.1.2 | None | ERR2517333 | MDR-TB | lineage2.2.1 | nl | ERR7911698 | Pre-XDR-TB | lineage2.2.1 | za | SRR10808688 | Pre-XDR-TB | lineage4 | None | SRR16156816 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370502 | MDR-TB | lineage2.2.1 | None | ERR9125282 | MDR-TB | lineage2.2.1 | None | SRR16088406 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515153 | MDR-TB | lineage2.2.1 | None | ERR3275274 | MDR-TB | lineage2.2.1 | nl | ERR8025737 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806906 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737833 | MDR-TB | lineage2.2.1 | None | ERR10610276 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043509 | MDR-TB | lineage2.2.1 | None | SRR24710004 | MDR-TB | lineage2.2.1 | None | ERR8774401 | MDR-TB | lineage4.3.4.2 | None | SRR29093579 | Pre-XDR-TB | lineage2.2.1 | None | ERR2706974 | MDR-TB | lineage4.3.4.2 | cd | SRR29017452 | Pre-XDR-TB | lineage3 | None | ERR9806609 | MDR-TB | lineage2.2.1 | None | SRR16058382 | MDR-TB | lineage2.2.1 | None | ERR2516861 | MDR-TB | lineage2.2.1 | gb | ERR7737803 | MDR-TB | lineage2.2.1 | None | ERR8774578 | MDR-TB | lineage2.2.1 | None | ERR3794355 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088048 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119721 | MDR-TB | lineage2.2.1 | None |
---|