Rv3596c - c.1113G>A

Drug resistance types
126 Sensitive 4 RR-TB 30 HR-TB 36 MDR-TB 37 Pre-XDR-TB 5 XDR-TB 11 Other
lineage Counts
lineage Count
lineage2.2.2 246
lineage2.2.1 1
lineage2.2.1;lineage2.2.2 1
lineage2.2.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 249
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013573 Pre-XDR-TB lineage2.2.2 None
SRR1048880 Pre-XDR-TB lineage2.2.2 None
SRR1048879 Pre-XDR-TB lineage2.2.2 None
SRR1202566 Sensitive lineage2.2.2 None
SRR1144768 Pre-XDR-TB lineage2.2.2 None
ERR13297994 MDR-TB lineage2.2.2 None
SRR29055767 Sensitive lineage2.2.2 None
DRR473849 Sensitive lineage2.2.2 None
SRR1013664 XDR-TB lineage2.2.2 None
SRR1202525 Sensitive lineage2.2.2 None
SRR1208175 Sensitive lineage2.2.2 None
SRR1208352 Sensitive lineage2.2.2 None
SRR21675647 Sensitive lineage2.2.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1020008 Sensitive lineage2.2.2 None
SRR1049077 XDR-TB lineage2.2.2 None
SRR22250242 HR-TB lineage2.2.2 None
SRR6397378 Sensitive lineage2.2.2 ca
SRR21658573 Sensitive lineage2.2.2 None
SRR21732968 Sensitive lineage2.2.2 None
ERR13191712 MDR-TB lineage2.2.2 None
SRR28467058 HR-TB lineage2.2.2 None
SAMN02398708 Pre-XDR-TB lineage2.2.2 kr
SAMN02398716 Pre-XDR-TB lineage2.2.2 kr
SRR1013585 Sensitive lineage2.2.2 None
SRR29093918 Pre-XDR-TB lineage2.2.2 None
ERR4815118 Other lineage2.2.2 None
ERR13291282 Sensitive lineage2.2.2 None
SRR26139261 Sensitive lineage2.2.2 None
ERR13230601 Sensitive lineage2.2.2 None
SRR29440735 Sensitive lineage2.2.2 None
ERR13245480 Sensitive lineage2.2.2 None
ERR13243544 MDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR29093094 Pre-XDR-TB lineage2.2.2 None
SRR6152899 MDR-TB lineage2.2.2 ca
SRR6152850 Sensitive lineage2.2.2 ca
SRR22250072 HR-TB lineage2.2.2 None
ERR4810704 Other lineage2.2.2 cn
SRR1048010 Pre-XDR-TB lineage2.2.2 None
SRR1013660 MDR-TB lineage2.2.2 None
SRR23862065 Sensitive lineage2.2.2 None
SRR25515355 MDR-TB lineage2.2.2 None
SRR1048999 Sensitive lineage2.2.2 None
SAMN02360565 Pre-XDR-TB lineage2.2.2 kr
ERR13230067 Sensitive lineage2.2.2 None
ERR13232480 MDR-TB lineage2.2.2 None
ERR13191099 Pre-XDR-TB lineage2.2.2 None
SRR1013657 Sensitive lineage2.2.2 None
ERR11138604 MDR-TB lineage2.2.2 None
SRR6398137 Sensitive lineage2.2.2 ca
SRR25515163 MDR-TB lineage2.2.1 None
ERR13245549 Sensitive lineage2.2.2 None
DRR188536 Sensitive lineage2.2.2 None
ERR13246356 Sensitive lineage2.2.2 None
ERR552760 Sensitive lineage2.2.2 tm
SAMN02360572 Sensitive lineage2.2.2 kr
SRR26112421 Sensitive lineage2.2.2 None
SRR21732812 Sensitive lineage2.2.2 None
ERR13230768 Sensitive lineage2.2.2 None
ERR13244331 MDR-TB lineage2.2.2 None
DRR188685 Sensitive lineage2.2.2 None
SRR16370351 Sensitive lineage2.2.2 None
SRR28859656 Sensitive lineage2.2.2 None
ERR4815901 Other lineage2.2.2 None
SRR22249937 HR-TB lineage2.2.2 None
DRR188919 Sensitive lineage2.2.2 None
ERR13194230 Sensitive lineage2.2.2 None
SRR21732967 Sensitive lineage2.2.2 None
SRR1208426 Sensitive lineage2.2.2 None
SRR29093103 Sensitive lineage2.2.2 None
SRR1013640 Sensitive lineage2.2.2 None
SRR1144771 Pre-XDR-TB lineage2.2.2 None
SAMN02360607 Sensitive lineage2.2.2 kr
SRR16089674 Sensitive lineage2.2.2 None
ERR13245422 Sensitive lineage2.2.2 None
ERR13230579 Sensitive lineage2.2.2 None
SRR10040346 MDR-TB lineage2.2.2 None
SRR16370627 HR-TB lineage2.2.2 None
SRR1208265 Sensitive lineage2.2.2 None
DRR130111 Pre-XDR-TB lineage2.2.2 None
DRR188944 Sensitive lineage2.2.2 None
DRR130105 Pre-XDR-TB lineage2.2.2 None
SRR6153215 Sensitive lineage2.2.2 ca
SRR1013586 Sensitive lineage2.2.2 None
SRR6152846 Sensitive lineage2.2.2 ca
SAMN02360609 MDR-TB lineage2.2.2 kr
ERR11138602 HR-TB lineage2.2.2 None
ERR11138659 XDR-TB lineage2.2.2 None
SRR1202527 Sensitive lineage2.2.2 None
ERR3132302 MDR-TB lineage2.2.2 None
SRR17657931 MDR-TB lineage2.2.2 None
DRR473963 Sensitive lineage2.2.2 None
SRR21732158 Sensitive lineage2.2.2 None
SRR26139260 Sensitive lineage2.2.2 None
SRR28467044 MDR-TB lineage2.2.2 None
SRR21732973 HR-TB lineage2.2.2 None
ERR13230581 Sensitive lineage2.2.2 None
ERR551636 Other lineage2.2.2 tm
SRR1013550 Pre-XDR-TB lineage2.2.2 None
SRR1013572 Pre-XDR-TB lineage2.2.2 None
SRR6397662 HR-TB lineage2.2.2 ca
SRR1202652 Sensitive lineage2.2.2 None
SRR1208266 Sensitive lineage2.2.2 None
ERR13191074 MDR-TB lineage2.2.2 None
ERR13195552 Pre-XDR-TB lineage2.2.2 None
ERR13194109 Sensitive lineage2.2.2 None
ERR13243568 Pre-XDR-TB lineage2.2.2 None
DRR188726 Sensitive lineage2.2.2 None
SRR1049052 Sensitive lineage2.2.2 None
SRR1047983 RR-TB lineage2.2.2 None
ERR13194083 XDR-TB lineage2.2.2 None
ERR13193940 Sensitive lineage2.2.2 None
ERR13230063 Sensitive lineage2.2.2 None
ERR13232761 MDR-TB lineage2.2.2 None
ERR13244327 MDR-TB lineage2.2.2 None
ERR13266705 MDR-TB lineage2.2.2 None
DRR130139 MDR-TB lineage2.2.2 None
SRR16058655 Sensitive lineage2.2.2 None
ERR071084 Sensitive lineage2.2.2 None
SRR1013656 Sensitive lineage2.2.2 None
DRR188593 Sensitive lineage2.2.2 None
SRR1202567 Sensitive lineage2.2.2 None
SRR10040520 MDR-TB lineage2.2.2 None
DRR188874 Sensitive lineage2.2.2 None
ERR13195611 MDR-TB lineage2.2.2 None
ERR13243511 Pre-XDR-TB lineage2.2.2 None
ERR13243550 Pre-XDR-TB lineage2.2.2 None
ERR11138618 Sensitive lineage2.2.2 None
SRR29052834 Sensitive lineage2.2.2 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR21714186 Sensitive lineage2.2.2 None
SRR28467059 Pre-XDR-TB lineage2.2.2 None
ERR4820990 Sensitive lineage2.2.2 None
SRR26112094 HR-TB lineage2.2.2 None
SRR1013584 HR-TB lineage2.2.2 None
SAMN02398697 RR-TB lineage2.2.2 kr
SAMN02398706 Sensitive lineage2.2.2 kr
SRR6398004 Sensitive lineage2.2.2 ca
SRR1144725 Pre-XDR-TB lineage2.2.2 None
ERR3276288 Sensitive lineage2.2.2 nl
SRR6153016 HR-TB lineage2.2.2 ca
ERR3132268 MDR-TB lineage2.2.2 None
SRR21689800 Sensitive lineage2.2.2 None
SRR2333215 MDR-TB lineage2.2.2 au
ERR13195509 MDR-TB lineage2.2.2 None
ERR13195624 Sensitive lineage2.2.2 None
SRR1049056 MDR-TB lineage2.2.2 None
DRR034458 Other lineage2.2.2 None
ERR4810703 Other lineage2.2.2 cn
ERR13231250 Sensitive lineage2.2.2 None
ERR233359 Sensitive lineage2.2.2 kr
SAMN02360566 Pre-XDR-TB lineage2.2.2 kr
SRR1049057 MDR-TB lineage2.2.2 None
ERR13265720 Sensitive lineage2.2.2 None
SRR1208322 Sensitive lineage2.2.2 None
SRR7496545 Sensitive lineage2.2.2 us
SRR29093112 MDR-TB lineage2.2.2 None
ERR13237767 Pre-XDR-TB lineage2.2.2 None
SRR29053273 HR-TB lineage2.2.2 None
SRR1208286 Sensitive lineage2.2.2 None
ERR2514407 Sensitive lineage2.2.2 gb
DRR130104 Pre-XDR-TB lineage2.2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013616 Sensitive lineage2.2.2 None
SRR1049053 Sensitive lineage2.2.2 None
SRR1144817 Sensitive lineage2.2.2 None
SRR29230663 Sensitive lineage2.2.2 None
SRR25206920 MDR-TB lineage2.2.2 None
SRR1144729 Sensitive lineage2.2.2 None
SRR1013574 Pre-XDR-TB lineage2.2.2 None
ERR13258442 MDR-TB lineage2.2.2 None
ERR13292107 Sensitive lineage2.2.2 None
SAMN02360611 XDR-TB lineage2.2.2 kr
SAMN02360599 Sensitive lineage2.2.2 kr
ERR13262240 Sensitive lineage2.2.2 None
ERR1213847 Other lineage2.2.2 kr
SRR19314680 HR-TB lineage2.2.2 None
SRR8237360 Sensitive lineage2.2.2 None
SRR22251382 HR-TB lineage2.2.2 None
SRR21820123 Sensitive lineage2.2.2 None
DRR474195 HR-TB lineage2.2.2 None
SRR29093910 HR-TB lineage2.2.2 None
ERR13258384 Pre-XDR-TB lineage2.2.2 None
SRR26112479 Sensitive lineage2.2.2 None
ERR13265207 HR-TB lineage2.2.2 None
SRR6930891 RR-TB lineage2.2.2 None
ERR13290760 HR-TB lineage2.2.2 None
SRR16370239 Other lineage2.2.2 None
SRR1048871 Pre-XDR-TB lineage2.2.2 None
SRR22251334 HR-TB lineage2.2.2 None
ERR13194235 Sensitive lineage2.2.2 None
SRR1208291 Sensitive lineage2.2.2 None
SRR22249921 HR-TB lineage2.2.2 None
SRR1144774 RR-TB lineage2.2.2 None
SRR22251543 Sensitive lineage2.2.2 None
SRR16057921 Sensitive lineage2.2.2 None
SRR30182323 HR-TB lineage2.2.2 None
SRR1208300 Sensitive lineage2.2.2;lineage4.9 None
SRR21677640 Sensitive lineage2.2.2 None
SRR1013615 Sensitive lineage2.2.2 None
SRR1013641 Sensitive lineage2.2.2 None
SRR1048970 Sensitive lineage2.2.2 None
SRR6397379 HR-TB lineage2.2.2 ca
ERR1213849 MDR-TB lineage2.2.2 kr
ERR3132077 HR-TB lineage2.2.2 None
SRR6930890 Pre-XDR-TB lineage2.2.2 None
SRR1013571 Pre-XDR-TB lineage2.2.2 None
ERR11138630 MDR-TB lineage2.2.2 None
ERR13194416 Sensitive lineage2.2.2 None
SRR26111958 Sensitive lineage2.2.2 None
ERR9125846 Sensitive lineage2.2.2 None
SRR1208248 Sensitive lineage2.2.2 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR1048872 Pre-XDR-TB lineage2.2.2 None
SRR1013549 Pre-XDR-TB lineage2.2.2 None
SRR1013583 Sensitive lineage2.2.2 None
SRR1013661 MDR-TB lineage2.2.2 None
SRR1202553 Sensitive lineage2.2.2 None
SRR6397741 Sensitive lineage2.2.2 ca
ERR13267482 Sensitive lineage2.2.2 None
SRR1208214 Sensitive lineage2.2.2 None
DRR188568 Other lineage2.2.2 None
DRR188607 Sensitive lineage2.2.2 None
SRR1202672 Sensitive lineage2.2.2 None
ERR3132300 Other lineage2.2.2 None
SRR1049000 Sensitive lineage2.2.2 None
SRR19221475 Other lineage2.2.2 None
SRR22251340 HR-TB lineage2.2.2 None
DRR130208 Sensitive lineage2.2.2 None
SRR1049035 Sensitive lineage2.2.2 None
SRR21691068 Sensitive lineage2.2.2 None
SRR6398132 HR-TB lineage2.2.2 ca
SRR1202559 Sensitive lineage2.2.2 None
DRR473937 HR-TB lineage2.2.2 None
ERR11069088 MDR-TB lineage2.2.2 None
ERR4827810 Sensitive lineage2.2.2 None
SRR22251964 HR-TB lineage2.2.2 None
ERR11138613 Sensitive lineage2.2.2 None
ERR13195605 MDR-TB lineage2.2.2 None
DRR034516 Sensitive lineage2.2.2 None
SRR22249840 HR-TB lineage2.2.2 None
ERR13230603 Sensitive lineage2.2.2 None
SRR22251754 HR-TB lineage2.2.2 None
SRR1049034 Sensitive lineage2.2.2 None
SRR29385296 MDR-TB lineage2.2.2 None
SAMN02360587 Sensitive lineage2.2.2 kr
SRR21722051 Sensitive lineage2.2.2 None