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SRA data
Rv3601c
- c.48C>T
Drug resistance types
4 Sensitive
0 RR-TB
4 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
2
lineage2.2.1
2
La1.7;lineage4.9;lineage7
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
1
lineage2.2.1.1
1
La1.7;lineage4.9
1
lineage4.9;lineage7
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
10
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR4811493
HR-TB
lineage4.9
None
ERR4831117
HR-TB
lineage4.9;lineage7
None
SRR15368804
Sensitive
lineage2.2.1.1
None
SRR5074095
Sensitive
lineage2.2.1
vn
SRR5074158
Sensitive
lineage2.2.1
vn
SRR5341313
Sensitive
La1.7;lineage4.9;lineage7
None
SRR5341373
Other
lineage4.9
None
SRR5341422
HR-TB
La1.7;lineage4.9;lineage7
None
Showing 1 to 10 of 10 entries
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