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SRA data
Rv3696c
- c.1230C>T
Drug resistance types
6 Sensitive
1 RR-TB
1 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.2
5
lineage4.2;lineage4.9
1
M.canetti;lineage4.2;lineage4.9
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
La1.6;La3;M.canetti;lineage4.2.2
1
La1.6;La3;M.canetti;lineage4.2;lineage4.9
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
14
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR024338
Sensitive
lineage4.3.2
None
ERR024339
Sensitive
lineage4.3.2
None
ERR024344
Sensitive
lineage4.3.2
nl
ERR024346
Sensitive
lineage4.3.2
nl
ERR024347
Sensitive
lineage4.3.2
nl
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR4798406
MDR-TB
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
None
ERR4828872
Sensitive
lineage4.2;lineage4.9
None
ERR5311079
Other
La1.6;La3;M.canetti;lineage4.2;lineage4.9
None
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