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SRA data
Rv3793
- c.2799G>A
Drug resistance types
5 Sensitive
0 RR-TB
2 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.3.2
2
La1.6;La3;M.canetti;lineage2.1;lineage4.9
1
lineage2.2.1
1
lineage4.3.4.1
1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
1
lineage4.1.2.1
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
7
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3283020
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.9
None
ERR3797017
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR4828800
Sensitive
lineage4.1.2.1
None
SRR12882053
Sensitive
lineage1.1.3.2
None
SRR20969434
Sensitive
lineage2.2.1
None
SRR25340959
Sensitive
lineage1.1.3.2
None
SRR28859738
Sensitive
lineage4.3.4.1
None
Showing 1 to 7 of 7 entries
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