Rv3793 - c.2827_2829delGTCinsAT
Drug resistance types
0 Sensitive
1 RR-TB
10 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| 2 | |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 22 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR234659 | HR-TB | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR1172817 | Other | La3 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196768 | MDR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
|---|
