Rv3794 - c.-11C>T
Drug resistance types
2 Sensitive
3 RR-TB
2 HR-TB
77 MDR-TB
41 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.4 | 2 |
| lineage2.2.1 | 66 |
| lineage4.2.1 | 6 |
| lineage4.6.1.2 | 3 |
| lineage4.1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 15 |
| lineage4.3.4.2;lineage4.1.1.1 | 2 |
| lineage4.3.1;lineage2.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage1.2.1.1 | 1 |
| lineage3 | 5 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.1.1 | 1 |
| lineage4 | 2 |
| lineage2.2.2 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 4 |
| lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 128 |
Geographic prevalence
Country level data for this variant is available for 28 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None | SRR7657761 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755697 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755690 | Pre-XDR-TB | lineage4.2.1 | None | ERR10748216 | MDR-TB | lineage4.6.1.2 | None | ERR11488785 | MDR-TB | lineage4.1.1.1 | None | ERR11044274 | MDR-TB | lineage1.2.2.2 | None | ERR10762331 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762369 | Pre-XDR-TB | lineage4.2.1 | None | ERR10748540 | MDR-TB | lineage4.6.1.2 | None | ERR10877863 | MDR-TB | lineage2.2.1 | None | ERR11044091 | MDR-TB | lineage2.2.1 | None | ERR3287502 | MDR-TB | lineage4.3.4.2 | None | ERR3287501 | MDR-TB | lineage4.3.4.2;lineage4.1.1.1 | None | ERR12268447 | Pre-XDR-TB | lineage4.3.1;lineage2.2.1 | None | ERR3287580 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4828297 | MDR-TB | lineage2.2.1 | None | ERR3639751 | XDR-TB | lineage2.2.1 | None | ERR11798530 | Pre-XDR-TB | lineage2.2.1 | None | ERR12117986 | MDR-TB | lineage4.3.4.2 | None | ERR5865867 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665892 | MDR-TB | lineage2.2.1 | None | SRR26937007 | MDR-TB | lineage2.2.1 | None | ERR5865868 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987377 | MDR-TB | lineage2.2.1 | None | SRR24256175 | MDR-TB | lineage2.2.1 | None | ERR7737659 | MDR-TB | lineage2.2.1.1 | None | SRR24256105 | MDR-TB | lineage2.2.1 | None | SRR21798449 | Pre-XDR-TB | lineage4.3.3 | None | ERR8773606 | MDR-TB | lineage2.2.1 | None | ERR7975673 | MDR-TB | lineage4.3.3 | None | SRR24256353 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732976 | Sensitive | lineage1.2.1.1 | None | SRR22249805 | MDR-TB | lineage3 | None | SRR1166187 | MDR-TB | lineage2.2.1 | None | ERR9029875 | MDR-TB | lineage4.3.4.2;lineage4.1.1.1 | None | ERR8773608 | MDR-TB | lineage2.2.1 | None | ERR9119977 | MDR-TB | lineage2.2.1 | None | SRR10306027 | Pre-XDR-TB | lineage2.2.1 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1166267 | MDR-TB | lineage2.2.1 | None | SRR1169036 | MDR-TB | lineage2.2.1 | None | SRR1169111 | MDR-TB | lineage2.2.1 | None | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | SRR13232610 | MDR-TB | lineage2.2.1 | None | SRR14781981 | MDR-TB | lineage2.2.1 | None | SRR14801458 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156800 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR14782739 | MDR-TB | lineage2.2.1 | None | SRR14801706 | MDR-TB | lineage4.2.1 | None | SRR15364433 | Pre-XDR-TB | lineage4.1.1 | None | SRR16156791 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR18714832 | MDR-TB | lineage2.2.1 | None | SRR18714909 | MDR-TB | lineage2.2.1 | None | SRR18715075 | MDR-TB | lineage2.2.1 | None | SRR21576637 | MDR-TB | lineage4 | None | SRR21576624 | MDR-TB | lineage4 | None | SRR24112526 | RR-TB | lineage2.2.2 | None | ERR11082858 | MDR-TB | lineage2.2.1 | None | SRR24112527 | MDR-TB | lineage2.2.2 | None | ERR11081241 | MDR-TB | lineage4.3.4.1 | None | ERR11081995 | XDR-TB | lineage2.2.1 | None | SRR24112528 | RR-TB | lineage2.2.2 | None | SRR25207230 | MDR-TB | lineage2.2.1 | None | SRR21887697 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256177 | MDR-TB | lineage2.2.1 | None | ERR1873392 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR24256285 | MDR-TB | lineage2.2.1 | None | ERR1465967 | MDR-TB | lineage4.8 | None | SRR28170735 | MDR-TB | lineage3 | None | SRR24256154 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723453 | MDR-TB | lineage2.2.1 | cn | ERR1465842 | MDR-TB | lineage4.8 | None | SRR25207268 | MDR-TB | lineage2.2.1 | None | SRR24256231 | MDR-TB | lineage2.2.1 | None | SRR25207269 | MDR-TB | lineage2.2.1 | None | SRR6824532 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2041727 | MDR-TB | lineage4.4.1.1 | rs | ERR4812875 | MDR-TB | lineage4.3.4.2 | None | ERR4813596 | MDR-TB | lineage4.3.4.2 | None | SRR6824569 | MDR-TB | lineage2.2.1 | cn | ERR4813011 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR5153929 | Pre-XDR-TB | lineage4.2.1 | None | ERR751572 | MDR-TB | lineage4.3.4.2 | pe | SAMEA2534580 | RR-TB | lineage4.5 | uz | SRR1723570 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3743494 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584608 | MDR-TB | lineage2.2.1 | md | SRR6152777 | Sensitive | lineage2.2.1 | ca | SAMEA2535041 | MDR-TB | lineage2.2.1 | uz | ERR7911039 | Pre-XDR-TB | lineage2.2.1 | md | SAMN02584653 | MDR-TB | lineage2.2.1 | md | ERR2707142 | MDR-TB | lineage4.6.1.2 | cd | SAMEA2533723 | MDR-TB | lineage4.8 | uz | ERR1873531 | Pre-XDR-TB | lineage4.1.1.3 | za | SAMEA4041329 | MDR-TB | lineage4.8 | None | ERR2653100 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4822386 | Pre-XDR-TB | lineage2.2.1 | kg | ERR2677433 | MDR-TB | lineage2.2.1 | de | ERR2653105 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2653114 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2653149 | MDR-TB | lineage4.3.4.2 | None | ERR4822295 | MDR-TB | lineage2.2.1 | de | ERR2516327 | MDR-TB | lineage2.2.1 | be | ERR4810987 | MDR-TB | lineage2.2.1 | cn | SRR6256974 | Pre-XDR-TB | lineage2.2.1 | None | ERR3335759 | MDR-TB | lineage3 | pk | ERR4797209 | Pre-XDR-TB | lineage2.2.1 | in | SRR6256971 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800211 | MDR-TB | lineage3 | in | ERR4813349 | MDR-TB | lineage4.3.4.2 | pe | ERR4829374 | MDR-TB | lineage4.1.2.1 | it | ERR4811777 | MDR-TB | lineage4.3.4.2 | pe | SRR6807708 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872295 | XDR-TB | lineage2.2.1 | None | SRR6831888 | MDR-TB | lineage2.2.1 | None | SRR6832489 | HR-TB | lineage4.3.3 | None | SRR6832732 | Pre-XDR-TB | lineage4.3.3 | None | SRR6832746 | MDR-TB | lineage2.2.1 | None | SRR6832798 | MDR-TB | lineage2.2.1 | None | ERR4813417 | MDR-TB | lineage4.3.4.2 | pe | SRR6832442 | MDR-TB | lineage2.2.1 | None | SRR6797528 | HR-TB | lineage1.1.3.1 | None | SRR6964514 | Pre-XDR-TB | lineage3 | None | SRR6807747 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831749 | MDR-TB | lineage2.2.1 | None | SRR6831710 | MDR-TB | lineage2.2.1 | None | ERR4813156 | Pre-XDR-TB | lineage4.3.4.2 | pe |
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