Rv3794 - c.-11C>T
Drug resistance types
2 Sensitive
5 RR-TB
3 HR-TB
107 MDR-TB
46 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 88 |
| lineage4.3.4.2 | 19 |
| lineage4.2.1 | 7 |
| lineage3 | 6 |
| lineage4.1.1.1;lineage4.3.4.2 | 3 |
| lineage4.5 | 7 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 8 |
| lineage4.1.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.2.2 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.1.4 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 6 |
| lineage4.4.1.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 167 |
Geographic prevalence
Country level data for this variant is available for 28 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28714179 | MDR-TB | lineage2.2.1 | None | SRR28393358 | MDR-TB | lineage4.3.4.2 | None | SRR29539552 | MDR-TB | lineage2.2.1 | None | SRR29539640 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539802 | MDR-TB | lineage2.2.1 | None | SRR29539269 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653105 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR7755690 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801706 | MDR-TB | lineage4.2.1 | None | ERR4800211 | MDR-TB | lineage3 | in | SRR28170735 | MDR-TB | lineage3 | None | SAMEA5569694 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR24256175 | MDR-TB | lineage2.2.1 | None | ERR552341 | RR-TB | lineage4.5 | None | ERR4872295 | XDR-TB | lineage2.2.1 | None | ERR11044274 | MDR-TB | lineage1.2.2.2 | None | SRR18715075 | MDR-TB | lineage2.2.1 | None | SRR21576637 | MDR-TB | lineage4.5 | None | ERR8773608 | MDR-TB | lineage2.2.1 | None | ERR3287502 | MDR-TB | lineage4.3.4.2 | None | SAMEA2533723 | MDR-TB | lineage4.8 | uz | ERR11081995 | XDR-TB | lineage2.2.1 | None | ERR4812875 | MDR-TB | lineage4.3.4.2 | None | ERR551131_ERR551130 | MDR-TB | lineage4.8 | None | SRR15364433 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR11798530 | Pre-XDR-TB | lineage2.2.1 | None | ERR551130 | MDR-TB | lineage4.8 | None | ERR5865867 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964514 | Pre-XDR-TB | lineage3 | None | SRR6256974 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737659 | MDR-TB | lineage2.2.1.1 | None | SRR6831710 | MDR-TB | lineage2.2.1 | None | SRR24112526 | MDR-TB | lineage2.2.2 | None | SRR5153929 | Pre-XDR-TB | lineage4.2.1 | None | SRR26937007 | MDR-TB | lineage2.2.1 | None | SRR25207268 | MDR-TB | lineage2.2.1 | None | ERR552342 | RR-TB | lineage4.5 | None | ERR4822295 | MDR-TB | lineage2.2.1 | de | SRR13232610 | MDR-TB | lineage2.2.1 | None | SRR16156800 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None | SRR6152777 | Sensitive | lineage2.2.1 | ca | SRR18714832 | MDR-TB | lineage2.2.1 | None | SRR10040550 | MDR-TB | lineage2.2.1 | None | ERR8665892 | MDR-TB | lineage2.2.1 | None | SRR21576624 | MDR-TB | lineage4.5 | None | SRR1166187 | MDR-TB | lineage2.2.1 | None | SRR6797528 | HR-TB | lineage1.1.3.1 | None | SRR28393785 | MDR-TB | lineage4.3.4.2 | None | SRR28351322 | Pre-XDR-TB | lineage3 | None | SRR28393359 | MDR-TB | lineage4.3.4.2 | None | ERR3335759 | MDR-TB | lineage3 | pk | SRR29539682 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539852 | XDR-TB | lineage2.2.1 | None | SRR29539560 | MDR-TB | lineage2.2.1 | None | SRR29539631 | MDR-TB | lineage4.3.3 | None | SRR29539652 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772796 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207147 | MDR-TB | lineage2.2.1 | None | SRR29539737 | MDR-TB | lineage2.2.1 | None | ERR2307548 | MDR-TB | lineage2.2.1 | None | ERR10877865 | MDR-TB | lineage2.2.1 | None | ERR10762369 | Pre-XDR-TB | lineage4.2.1 | None | ERR8773606 | MDR-TB | lineage2.2.1 | None | SRR24256177 | MDR-TB | lineage2.2.1 | None | ERR2041727 | MDR-TB | lineage4.4.1.1 | rs | ERR2516327 | MDR-TB | lineage2.2.1 | be | SRR24256231 | MDR-TB | lineage2.2.1 | None | SRR6831888 | MDR-TB | lineage2.2.1 | None | SRR14782739 | MDR-TB | lineage2.2.1 | None | ERR1654694 | MDR-TB | lineage4.6.1.2 | None | ERR7911039 | Pre-XDR-TB | lineage2.2.1 | md | ERR2677433 | MDR-TB | lineage2.2.1 | de | SRR3743494 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707142 | MDR-TB | lineage4.6.1.2 | cd | ERR11044091 | MDR-TB | lineage2.2.1 | None | SAMN02584608 | MDR-TB | lineage2.2.1 | md | ERR4797209 | Pre-XDR-TB | lineage2.2.1 | in | SAMEA2535041 | MDR-TB | lineage2.2.1 | uz | SRR14801458 | Pre-XDR-TB | lineage4.2.1 | None | ERR1465967 | MDR-TB | lineage4.8 | None | ERR2307542 | MDR-TB | lineage2.2.1 | None | SRR24256105 | MDR-TB | lineage2.2.1 | None | SRR1723570 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6832746 | MDR-TB | lineage2.2.1 | None | ERR10762331 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082858 | MDR-TB | lineage2.2.1 | None | SRR6832442 | MDR-TB | lineage2.2.1 | None | SRR1169036 | MDR-TB | lineage2.2.1 | None | ERR7975673 | MDR-TB | lineage4.3.3 | None | ERR3639751 | XDR-TB | lineage2.2.1 | None | ERR4810987 | MDR-TB | lineage2.2.1 | cn | SRR25207269 | MDR-TB | lineage2.2.1 | None | SRR6832732 | Pre-XDR-TB | lineage4.3.3 | None | SRR10306027 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813156 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR4822386 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4829374 | MDR-TB | lineage4.1.2.1 | it | ERR11081241 | MDR-TB | lineage4.3.4.1 | None | ERR4813596 | MDR-TB | lineage4.3.4.2 | None | SRR18714909 | MDR-TB | lineage2.2.1 | None | SRR24112528 | RR-TB | lineage2.2.2 | None | ERR1465842 | MDR-TB | lineage4.8 | None | ERR1873531 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR551131 | MDR-TB | lineage4.8 | None | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | SRR21732976 | Sensitive | lineage1.2.1.1 | None | ERR1465842_ERR1465967 | MDR-TB | lineage4.8 | None | SRR1723453 | MDR-TB | lineage2.2.1 | cn | SRR7657761 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584653 | MDR-TB | lineage2.2.1 | md | ERR552973 | MDR-TB | lineage2.2.1 | None | SAMEA2534580 | RR-TB | lineage4.5 | uz | ERR9119977 | MDR-TB | lineage2.2.1 | None | SRR6824532 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7755697 | Pre-XDR-TB | lineage4.2.1 | None | SRR6256971 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653114 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4811777 | MDR-TB | lineage4.3.4.2 | pe | SRR28706426 | MDR-TB | lineage2.2.1 | None | SRR28498579 | MDR-TB | lineage4.2.1 | None | SRR28393790 | MDR-TB | lineage4.3.4.2 | None | SRR29681356 | MDR-TB | lineage2.2.1 | None | ERR13110318 | HR-TB | lineage4.3.4.2 | None | SRR30180327 | MDR-TB | lineage2.2.1 | None | SRR30180224 | MDR-TB | lineage4.5 | None | ERR10748216 | MDR-TB | lineage4.6.1.2 | None | SRR6832489 | HR-TB | lineage4.3.3 | None | SRR6831749 | MDR-TB | lineage2.2.1 | None | ERR12268447 | Pre-XDR-TB | lineage2.2.1;lineage4.3.1 | None | ERR1873392 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3287580 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR21887697 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824569 | MDR-TB | lineage2.2.1 | cn | ERR552341_ERR552342 | RR-TB | lineage4.5 | None | ERR2307595 | MDR-TB | lineage2.2.1 | None | SRR10040395 | MDR-TB | lineage2.2.1 | None | ERR4813349 | MDR-TB | lineage4.3.4.2 | pe | ERR552974 | MDR-TB | lineage2.2.1 | None | ERR2653149 | MDR-TB | lineage4.3.4.2 | None | SRR24256285 | MDR-TB | lineage2.2.1 | None | SRR14781981 | MDR-TB | lineage2.2.1 | None | SAMEA4041329 | MDR-TB | lineage4.8 | None | SRR22249805 | MDR-TB | lineage3 | None | ERR751572 | MDR-TB | lineage4.3.4.2 | pe | SRR6832798 | MDR-TB | lineage2.2.1 | None | ERR2307514 | MDR-TB | lineage2.2.1 | None | SRR6807708 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256353 | Pre-XDR-TB | lineage2.2.1 | None | ERR12117986 | MDR-TB | lineage4.3.4.2 | None | ERR5987377 | MDR-TB | lineage2.2.1 | None | ERR4828297 | MDR-TB | lineage2.2.1 | None | ERR3287501 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR1169111 | MDR-TB | lineage2.2.1 | None | ERR9029875 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | ERR4813417 | MDR-TB | lineage4.3.4.2 | pe | SRR24256154 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488785 | MDR-TB | lineage4.1.1.1 | None | SRR16156791 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR21798449 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748540 | MDR-TB | lineage4.6.1.2 | None | ERR552974_ERR552973 | MDR-TB | lineage2.2.1 | None | SRR6807747 | Pre-XDR-TB | lineage2.2.1 | None | SRR24112527 | MDR-TB | lineage2.2.2 | None | ERR5865868 | Pre-XDR-TB | lineage2.2.1 | None | ERR10869162 | MDR-TB | lineage4.3.3 | None | ERR2653100 | Pre-XDR-TB | lineage4.3.4.2 | None |
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