Rv3794 - c.-17G>A
Drug resistance types
36 Sensitive
5 RR-TB
3 HR-TB
35 MDR-TB
38 Pre-XDR-TB
3 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 96 |
| lineage2.2.1.1;lineage4.6.1 | 4 |
| lineage2.2.1 | 18 |
| lineage2.2.1.1;lineage3 | 3 |
| lineage1.1.3.1;lineage2.2.1.1 | 1 |
| lineage2.2.1.1;lineage2.2.1.2;lineage3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1.1;lineage3;lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799352 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR18213697 | Other | lineage2.2.1.1 | None | SRR1173415 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | SRR6797755 | Sensitive | lineage2.2.1.1 | None | SRR6797351 | Sensitive | lineage2.2.1.1 | None | ERR4423534 | MDR-TB | lineage2.2.1.1 | None | SRR5535861 | MDR-TB | lineage2.2.1.1 | None | ERR351895 | Other | lineage2.2.1.1 | None | ERR4827417 | MDR-TB | lineage2.2.1 | None | SRR21728168 | Sensitive | lineage2.2.1.1 | None | ERR4797477 | Sensitive | lineage2.2.1.1 | in | ERR4423650 | MDR-TB | lineage2.2.1.1 | None | SRR25827869 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2513936 | Sensitive | lineage2.2.1.1 | gb | SRR25827674 | XDR-TB | lineage2.2.1.1;lineage3 | None | SRR28044467 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28044786 | Sensitive | lineage2.2.1.1 | None | SRR28045563 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28045731 | Sensitive | lineage2.2.1.1 | None | ERR2510252 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR2510870 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR2510871 | Pre-XDR-TB | lineage2.2.1.1 | pk | SRR29772818 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6797299 | Sensitive | lineage1.1.3.1;lineage2.2.1.1 | None | SRR25827645 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18593231 | MDR-TB | lineage2.2.1.1;lineage3 | None | ERR4830057 | MDR-TB | lineage2.2.1 | None | ERR4799334 | Sensitive | lineage2.2.1.1 | None | ERR4796449 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799999 | MDR-TB | lineage2.2.1.1 | in | ERR4828007 | MDR-TB | lineage2.2.1 | None | ERR4799658 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4827992 | MDR-TB | lineage2.2.1 | None | ERR4830134 | MDR-TB | lineage2.2.1 | None | SRR6650402 | Sensitive | lineage2.2.1.1 | None | ERR4828135 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249541 | Sensitive | lineage2.2.1.1 | None | ERR4830043 | MDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4797116 | Sensitive | lineage2.2.1.1 | in | SRR3085270 | MDR-TB | lineage2.2.1 | None | ERR4798428 | MDR-TB | lineage2.2.1.1 | in | SRR25827356 | Pre-XDR-TB | lineage2.2.1.1;lineage2.2.1.2;lineage3 | None | ERR4828049 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799236 | Sensitive | lineage2.2.1.1 | in | ERR4798331 | Sensitive | lineage2.2.1.1 | in | ERR4423774 | MDR-TB | lineage2.2.1.1 | None | ERR4798295 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4423652 | RR-TB | lineage2.2.1.1 | None | SRR10809123 | MDR-TB | lineage4.1.2.1 | None | ERR1213887 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4423653 | MDR-TB | lineage2.2.1.1 | None | SRR1173866 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | SRR25340920 | Sensitive | lineage2.2.1.1 | None | SRR21685248 | Sensitive | lineage2.2.1.1 | None | SRR28044953 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28046072 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28045809 | XDR-TB | lineage2.2.1.1 | None | SRR29440870 | Sensitive | lineage2.2.1.1 | None | SRR30182632 | Sensitive | lineage2.2.1.1 | None | SRR25827652 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4.1.1.1 | None | ERR4830045 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132127 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6650247 | Sensitive | lineage2.2.1.1 | None | ERR386827 | Other | lineage2.2.1.1 | None | ERR4830117 | MDR-TB | lineage2.2.1 | None | ERR4798155 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4827563 | MDR-TB | lineage2.2.1 | None | ERR4827436 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800245 | MDR-TB | lineage2.2.1.1 | None | ERR4798513 | Sensitive | lineage2.2.1.1 | in | SRR22175261 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5341212 | Sensitive | lineage2.2.1.1 | None | SRR21689840 | Sensitive | lineage2.2.1.1 | None | ERR4814411 | Sensitive | lineage2.2.1.1 | gb | ERR4423659 | MDR-TB | lineage2.2.1.1 | None | SRR22424757 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827528 | MDR-TB | lineage2.2.1.1 | None | ERR4830114 | Pre-XDR-TB | lineage2.2.1 | tj | SRR25827812 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR4799743 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR25827435 | XDR-TB | lineage2.2.1.1 | None | ERR4800081 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797650 | Sensitive | lineage2.2.1.1 | in | ERR4423651 | RR-TB | lineage2.2.1.1 | None | SRR25827423 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4799862 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR6650180 | Other | lineage2.2.1.1 | None | SRR6152782 | Sensitive | lineage2.2.1.1 | ca | ERR405221 | MDR-TB | lineage2.2.1.1 | None | ERR4830123 | MDR-TB | lineage2.2.1 | None | SRR1173245 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | SRR6797434 | Sensitive | lineage2.2.1.1 | None | ERR4800238 | HR-TB | lineage2.2.1.1 | in | SRR7069622 | Sensitive | lineage2.2.1.1 | None | ERR3077945 | MDR-TB | lineage2.2.1.1 | None | SRR1173873 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | SRR15014750 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4423658 | RR-TB | lineage2.2.1.1 | None | ERR4797130 | RR-TB | lineage2.2.1.1 | in | ERR4816923 | Sensitive | lineage2.2.1.1 | None | ERR4799516 | MDR-TB | lineage2.2.1.1 | in | SRR28045760 | Sensitive | lineage2.2.1.1 | None | ERR2510305 | MDR-TB | lineage2.2.1.1 | pk | ERR4831012 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR29604865 | Sensitive | lineage2.2.1.1 | None | ERR4800352 | MDR-TB | lineage2.2.1.1 | in | ERR4827461 | MDR-TB | lineage2.2.1 | None | ERR4827921 | MDR-TB | lineage2.2.1 | None | ERR11067540 | Sensitive | lineage2.2.1.1 | None | ERR4799502 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR6797370 | Sensitive | lineage2.2.1.1 | None | SRR5535924 | MDR-TB | lineage2.2.1.1 | None | ERR10225494 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4830099 | Pre-XDR-TB | lineage2.2.1 | None | SRR17856656 | HR-TB | lineage2.2.1.1 | None | SRR2101233 | Other | lineage2.2.1.1 | None | ERR4423773 | MDR-TB | lineage2.2.1.1 | None | ERR4796398 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR6650257 | Sensitive | lineage2.2.1.1 | None | SRR25340745 | Sensitive | lineage2.2.1.1 | None | SRR21675928 | Sensitive | lineage2.2.1.1 | None | SRR5817465 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4799425 | Sensitive | lineage2.2.1.1 | in | ERR4799231 | HR-TB | lineage2.2.1.1 | in |
|---|
