Rv3794 - c.-29_-28delCT
Drug resistance types
0 Sensitive
4 RR-TB
1 HR-TB
24 MDR-TB
34 Pre-XDR-TB
8 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 56 |
| lineage5.2 | 6 |
| lineage1.2.2.2;lineage4.8.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage1.2.1.2.1 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR551899 | MDR-TB | lineage1.2.2.2 | sz | ERR4872094 | MDR-TB | lineage5.2 | None | SRR1144830 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992971 | XDR-TB | lineage1.2.2.2 | None | ERR4872093 | MDR-TB | lineage5.2 | None | ERR9993094 | XDR-TB | lineage1.2.2.2 | None | ERR11465987 | XDR-TB | lineage1.2.2.2;lineage4.8.1 | None | ERR551104_ERR551105 | MDR-TB | lineage4.1.2.1 | None | ERR4872171 | MDR-TB | lineage5.2 | None | ERR7362015 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR26112043 | Pre-XDR-TB | lineage1.2.1.2.1 | None | ERR551801 | MDR-TB | lineage1.2.2.2 | sz | SRR1146373 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13289002 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR29055691 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1162801 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR7737898 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR553059 | MDR-TB | lineage1.2.2.2 | sz | ERR9119569 | MDR-TB | lineage5.2 | None | ERR9992611 | XDR-TB | lineage1.2.2.2 | None | SRR1019149 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13290493 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11466247 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR2199793 | RR-TB | lineage1.2.2.2 | None | ERR13290492 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1140943 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR550869 | MDR-TB | lineage1.2.2.2 | sz | ERR553060 | RR-TB | lineage1.2.2.2 | None | ERR9119499 | MDR-TB | lineage5.2 | None | SAMN02414931 | Pre-XDR-TB | lineage1.2.2.2 | se | ERR13260022 | Pre-XDR-TB | lineage1.2.1.2.1 | None | ERR11466322 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465486 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR552000 | MDR-TB | lineage1.2.2.2 | sz | ERR9119958 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR8975017 | XDR-TB | lineage1.2.2.2 | None | ERR8975761 | MDR-TB | lineage1.2.2.2 | None | ERR9992707 | XDR-TB | lineage1.2.2.2 | None | SRR6207291 | HR-TB | lineage1.2.2.2 | None | ERR11465719 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465216 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR6982499 | MDR-TB | lineage1.2.2.2 | None | ERR9993260 | XDR-TB | lineage1.2.2.2 | None | ERR553020 | MDR-TB | lineage1.2.2.2 | None | ERR11488611 | MDR-TB | lineage1.2.2.2 | None | ERR551105 | RR-TB | lineage4.1.2.1 | None | SRR1140961 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465869 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1166874 | Pre-XDR-TB | lineage1.2.2.2 | None | SAMN02350482 | Pre-XDR-TB | lineage1.2.2.2 | za | SRR29056224 | Pre-XDR-TB | lineage1.2.1.2.1 | None | ERR13290491 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992644 | XDR-TB | lineage1.2.2.2 | None | SRR26331613 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR551104 | RR-TB | lineage4.1.2.1 | None | ERR552115 | MDR-TB | lineage1.2.2.2 | sz | ERR11773734 | MDR-TB | lineage1.2.2.2 | None | SAMN02350478 | Pre-XDR-TB | lineage1.2.2.2 | za | SAMEA2533704 | MDR-TB | lineage4.1.2.1 | uz | SRR2101806 | MDR-TB | lineage1.2.2.2 | None | SRR24827281 | Pre-XDR-TB | lineage1.2.1.2.1 | None | ERR551739 | MDR-TB | lineage1.2.2.2 | sz | ERR10748271 | MDR-TB | lineage1.2.2.2 | None | SRR1019139 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465448 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13288770 | MDR-TB | lineage1.2.2.2 | None | ERR13290490 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11466298 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR553021 | MDR-TB | lineage1.2.2.2 | sz | SRR12882085 | Pre-XDR-TB | lineage1.2.2.2 | None |
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