Rv3794 - c.-8C>A
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
155 MDR-TB
57 Pre-XDR-TB
7 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 158 |
| lineage4.2.1 | 12 |
| lineage4;lineage2.2.1 | 1 |
| lineage3 | 6 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.6.1.2 | 2 |
| lineage4.3 | 1 |
| lineage4.3.4.2 | 3 |
| lineage5.2 | 2 |
| 4 | |
| lineage4.2.2.2 | 2 |
| lineage4.1 | 4 |
| lineage2.2 | 10 |
| lineage4.2.1;lineage2.2.1 | 2 |
| lineage8 | 2 |
| lineage4.3.3 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.2.2.2;lineage2.2.1 | 1 |
| lineage4.3.4;lineage4.1.2.1 | 1 |
| lineage2 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 222 |
Geographic prevalence
Country level data for this variant is available for 45 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4872326 | MDR-TB | lineage2.2.1 | None | ERR4872264 | XDR-TB | lineage2.2.1 | None | ERR4872293 | XDR-TB | lineage2.2.1 | None | ERR4872279 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872313 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872327 | Pre-XDR-TB | lineage4.2.1 | None | ERR4872343 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832020 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831833 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832444 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832144 | MDR-TB | lineage2.2.1 | None | SRR6832272 | MDR-TB | lineage2.2.1 | None | SRR6832378 | MDR-TB | lineage4;lineage2.2.1 | None | SRR6832387 | MDR-TB | lineage2.2.1 | None | SRR6832223 | MDR-TB | lineage2.2.1 | None | SRR6832390 | MDR-TB | lineage2.2.1 | None | SRR6807751 | MDR-TB | lineage2.2.1 | None | SRR6832528 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534564 | MDR-TB | lineage4.2.1 | uz | SRR6964574 | MDR-TB | lineage3 | None | SRR6832827 | MDR-TB | lineage2.2.1 | None | SRR6807750 | MDR-TB | lineage2.2.1 | None | SRR6832519 | MDR-TB | lineage2.2.1 | None | ERR2984802 | MDR-TB | lineage4.3.4.1 | None | ERR11067574 | MDR-TB | lineage2.2.1 | None | ERR4872357 | MDR-TB | lineage2.2.1 | None | SRR8357426 | MDR-TB | lineage2.2.1 | None | SRR8351921 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR7585398 | Pre-XDR-TB | lineage3 | in | SRR7755668 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645804 | MDR-TB | lineage2.2.1 | None | SRR7645888 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645947 | MDR-TB | lineage2.2.1 | None | ERR10762329 | MDR-TB | lineage2.2.1 | None | SRR7755755 | MDR-TB | lineage2.2.1 | None | SRR7781496 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR067630 | MDR-TB | lineage2.2.1 | ru | ERR067643 | MDR-TB | lineage2.2.1 | ru | ERR067761 | Pre-XDR-TB | lineage2.2.1 | ru | ERR10762272 | MDR-TB | lineage2.2.1 | None | ERR10762304 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755721 | Pre-XDR-TB | lineage2.2.1 | None | DRR184884 | MDR-TB | lineage2.2.1 | vn | ERR067621 | MDR-TB | lineage2.2.1 | ru | ERR1034861 | Pre-XDR-TB | lineage2.2.1 | pt | ERR10762259 | MDR-TB | lineage2.2.1 | None | ERR10762301 | MDR-TB | lineage2.2.1 | None | ERR10762364 | MDR-TB | lineage2.2.1 | None | ERR10762429 | MDR-TB | lineage4.2.1 | None | ERR10762393 | MDR-TB | lineage2.2.1 | None | ERR10762430 | MDR-TB | lineage2.2.1 | None | ERR1199127 | MDR-TB | lineage4.6.1.2 | cd | ERR11043317 | MDR-TB | lineage4.2.1 | None | ERR11044662 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044942 | MDR-TB | lineage2.2.1 | None | ERR1193763 | MDR-TB | lineage4.3 | np | ERR3287851 | MDR-TB | lineage4.3.4.2 | pe | ERR144619 | MDR-TB | lineage2.2.1 | ru | ERR3335723 | Pre-XDR-TB | lineage3 | pk | ERR3639721 | MDR-TB | lineage2.2.1 | None | ERR3639789 | MDR-TB | lineage2.2.1 | None | ERR3639755 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794457 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794376 | MDR-TB | lineage2.2.1 | None | ERR3794407 | HR-TB | lineage2.2.1 | None | ERR3794477 | MDR-TB | lineage2.2.1 | None | ERR3794455 | MDR-TB | lineage2.2.1 | None | ERR4195753 | MDR-TB | lineage2.2.1 | None | ERR3794527 | MDR-TB | lineage2.2.1 | None | ERR403303 | MDR-TB | lineage2.2.1 | None | ERR4162031 | MDR-TB | lineage5.2 | None | ERR3794529 | MDR-TB | lineage2.2.1 | None | ERR4276850 | MDR-TB | lineage2.2.1 | None | ERR4553760 | MDR-TB | None | ERR4276909 | MDR-TB | lineage2.2.1 | None | ERR4553466 | MDR-TB | None | ERR4810982 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4553817 | MDR-TB | None | ERR4553865 | MDR-TB | None | ERR4800309 | XDR-TB | lineage4.2.2.2 | in | ERR4798843 | XDR-TB | lineage4.2.2.2 | in | ERR5865601 | MDR-TB | lineage2.2.1 | None | ERR5865600 | MDR-TB | lineage2.2.1 | None | ERR5865958 | MDR-TB | lineage4.1 | None | ERR5866539 | MDR-TB | lineage2.2.1 | None | ERR5866538 | MDR-TB | lineage2.2 | None | ERR7910976 | MDR-TB | lineage2.2.1 | md | ERR7910917 | MDR-TB | lineage4.2.1 | None | ERR7910968 | MDR-TB | lineage2.2.1 | md | ERR7910903 | MDR-TB | lineage2.2.1 | md | ERR7910978 | MDR-TB | lineage2.2.1 | md | ERR7911091 | MDR-TB | lineage2.2.1 | md | ERR7911052 | MDR-TB | lineage2.2.1 | md | ERR7911061 | MDR-TB | lineage2.2.1 | md | ERR7911242 | MDR-TB | lineage2.2.1 | md | ERR7911220 | MDR-TB | lineage2.2.1 | md | ERR7911265 | MDR-TB | lineage4.2.1 | md | ERR7911257 | MDR-TB | lineage2.2.1 | md | ERR7975629 | XDR-TB | lineage2.2.1 | None | ERR7975630 | MDR-TB | lineage2.2.1 | None | ERR7975675 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975648 | MDR-TB | lineage2.2.1 | None | SRR10380092 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774365 | MDR-TB | lineage4.1 | None | SRR10379973 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975677 | MDR-TB | lineage2.2.1 | None | ERR8774364 | MDR-TB | lineage4.1 | None | ERR9121304 | MDR-TB | lineage2.2.1 | None | SRR10380164 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR10380136 | MDR-TB | lineage2.2.1 | None | SRR10380159 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380170 | MDR-TB | lineage2.2.1 | None | SRR10380196 | MDR-TB | lineage2.2.1 | None | SRR1173725 | MDR-TB | lineage8 | None | SRR1173284 | MDR-TB | lineage8 | None | SRR10397114 | MDR-TB | lineage4.1 | None | SRR13243561 | Pre-XDR-TB | lineage2.2.1 | None | SRR13243567 | XDR-TB | lineage2.2.1 | None | SRR14781957 | MDR-TB | lineage2.2.1 | None | SRR13449603 | HR-TB | lineage4.3.3 | None | SRR14782030 | MDR-TB | lineage2.2.1 | None | SRR14782601 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782110 | MDR-TB | lineage2.2.1 | None | SRR14782333 | MDR-TB | lineage2.2.1 | None | SRR14782602 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782205 | MDR-TB | lineage2.2.1 | None | SRR14782420 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801510 | MDR-TB | lineage2.2.1 | None | SRR14782658 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14782802 | MDR-TB | lineage2.2.1 | None | SRR14801291 | MDR-TB | lineage2.2.1 | None | SRR14801505 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801295 | MDR-TB | lineage2.2.1 | None | SRR14801666 | MDR-TB | lineage2.2.1 | None | SRR14801881 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801687 | MDR-TB | lineage2.2.1 | None | SRR14802068 | MDR-TB | lineage2.2.1 | None | SRR14802065 | MDR-TB | lineage2.2.1 | None | SRR18714829 | MDR-TB | lineage2.2.1 | None | SRR14802094 | MDR-TB | lineage2.2.1 | None | SRR14802230 | MDR-TB | lineage2.2.1 | None | SRR14807524 | MDR-TB | lineage2.2.1 | None | SRR14802067 | MDR-TB | lineage2.2.1 | None | SRR16149142 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR18714870 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714890 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714910 | MDR-TB | lineage2.2.1 | None | SRR18715112 | MDR-TB | lineage2.2.1 | None | SRR18715101 | MDR-TB | lineage2.2.1 | None | SRR18715279 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715135 | MDR-TB | lineage2.2.1 | None | SRR18715471 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715285 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715463 | MDR-TB | lineage2.2.1 | None | SRR18715283 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715302 | MDR-TB | lineage2.2.1 | None | SRR18715330 | MDR-TB | lineage2.2.1 | None | SRR20632807 | Pre-XDR-TB | lineage2.2.2 | None | SRR20632779 | Pre-XDR-TB | lineage2.2.2 | None | ERR11068012 | MDR-TB | lineage2.2.1 | None | SRR22175219 | XDR-TB | lineage4.2.2.2;lineage2.2.1 | None | ERR11068889 | MDR-TB | lineage2.2.1 | None | ERR11068891 | MDR-TB | lineage2.2.1 | None | ERR11068214 | MDR-TB | lineage2.2.1 | None | ERR11068477 | MDR-TB | lineage2.2.1 | None | ERR11068560 | MDR-TB | lineage2.2.1 | None | ERR11068679 | MDR-TB | lineage2.2.1 | None | ERR11068892 | MDR-TB | lineage2.2.1 | None | ERR11068909 | Pre-XDR-TB | lineage3 | None | ERR11082542 | MDR-TB | lineage4.3.4.2 | None | SRR23861775 | MDR-TB | lineage2.2.1 | None | ERR11082744 | MDR-TB | lineage2.2.1 | None | ERR2510528 | MDR-TB | lineage2.2.1 | pk | ERR8025655 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806983 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813822 | Pre-XDR-TB | lineage4.3.4;lineage4.1.2.1 | None | SRR23861879 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025751 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806984 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025660 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510265 | Pre-XDR-TB | lineage2.2.1 | pk | ERR229931 | MDR-TB | lineage2.2.1 | ru | ERR229984 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2446278 | MDR-TB | lineage2.2.1 | nl | ERR2516356 | MDR-TB | lineage2.2.1 | be | ERR2677470 | MDR-TB | lineage4.3.4.2 | de | SRR23310851 | MDR-TB | lineage4.2.1 | None | SRR5153819 | MDR-TB | lineage2.2.1 | None | ERR2517193 | MDR-TB | lineage2.2.1 | nl | ERR2516160 | MDR-TB | lineage2.2.1 | es | ERR2707206 | MDR-TB | lineage4.6.1.2 | cd | SRR5153912 | MDR-TB | lineage2.2.1 | None | ERR2517024 | MDR-TB | lineage3 | gb | SRR23310812 | MDR-TB | lineage2 | None | SRR23310871 | MDR-TB | lineage2.2 | None | SRR23310876 | MDR-TB | lineage2.2 | None | SRR23310867 | MDR-TB | lineage2.2 | None | SRR23310877 | Pre-XDR-TB | lineage2.2 | None | ERR3275511 | MDR-TB | lineage2.2.1 | nl | SRR23310894 | MDR-TB | lineage2.2 | None | SRR23310909 | MDR-TB | lineage2.2 | None | SRR23310958 | MDR-TB | lineage2.2 | None | SRR23311013 | MDR-TB | lineage4.2.1 | None | SRR23311062 | MDR-TB | lineage4.2.1 | None | SRR23339961 | MDR-TB | lineage2.2 | None | ERR4827662 | MDR-TB | lineage2.2.1 | None | SRR23340097 | MDR-TB | lineage2.2 | None | ERR2706928 | MDR-TB | lineage5.2 | cd | ERR4822420 | MDR-TB | lineage2.2.1 | ua | ERR4822296 | MDR-TB | lineage2.2.1 | de | ERR4829168 | MDR-TB | lineage2.2.1 | it | SRR6484989 | MDR-TB | lineage2.2.1 | None | ERR4829945 | MDR-TB | lineage3 | pk | ERR4829822 | MDR-TB | lineage2.2.1 | None | ERR4828857 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829376 | Pre-XDR-TB | lineage2.2.1 | it | ERR4828819 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4828855 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4828967 | MDR-TB | lineage2.2.1 | None | SRR6484981 | HR-TB | lineage4.2.1.1 | None |
|---|
