Rv3794 - c.-8C>A
Drug resistance types
0 Sensitive
1 RR-TB
9 HR-TB
185 MDR-TB
83 Pre-XDR-TB
11 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 226 |
| lineage4.2.2.2 | 2 |
| lineage4.1 | 4 |
| lineage4.1.2.1 | 4 |
| lineage4.2.1 | 17 |
| lineage3 | 7 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3 | 4 |
| lineage2.2.2 | 3 |
| 2 | |
| lineage4.1.1.3 | 2 |
| lineage2.2 | 1 |
| lineage5.2 | 1 |
| lineage4.1.2.1;lineage4.3.4 | 1 |
| lineage2.2.1;lineage4.1;lineage4.3.3 | 1 |
| lineage8 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage4.6.1.2 | 2 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 289 |
Geographic prevalence
Country level data for this variant is available for 45 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4810982 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7975630 | MDR-TB | lineage2.2.1 | None | ERR2516356 | MDR-TB | lineage2.2.1 | be | SRR24256294 | MDR-TB | lineage2.2.1 | None | ERR4276909 | MDR-TB | lineage2.2.1 | None | ERR7911242 | MDR-TB | lineage2.2.1 | md | ERR10762301 | MDR-TB | lineage2.2.1 | None | SRR23339961 | MDR-TB | lineage2.2.1 | None | ERR4800309 | XDR-TB | lineage4.2.2.2 | in | ERR8774365 | MDR-TB | lineage4.1 | None | SRR23861879 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798581 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256139 | MDR-TB | lineage2.2.1 | None | ERR3639755 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802067 | MDR-TB | lineage2.2.1 | None | SRR16087886 | MDR-TB | lineage2.2.1 | None | SRR6832144 | MDR-TB | lineage2.2.1 | None | SRR10397114 | MDR-TB | lineage4.1 | None | ERR4276850 | MDR-TB | lineage2.2.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829822 | MDR-TB | lineage2.2.1 | None | ERR403303 | MDR-TB | lineage2.2.1 | None | SRR23310876 | MDR-TB | lineage2.2.1 | None | ERR3794527 | MDR-TB | lineage2.2.1 | None | ERR7910978 | MDR-TB | lineage2.2.1 | md | SRR10379973 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832223 | MDR-TB | lineage2.2.1 | None | ERR3794407 | HR-TB | lineage2.2.1 | None | SRR14782205 | MDR-TB | lineage2.2.1 | None | SRR24256032 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801510 | MDR-TB | lineage2.2.1 | None | SRR24256374 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068012 | MDR-TB | lineage2.2.1 | None | ERR4872357 | MDR-TB | lineage2.2.1 | None | SRR6807750 | MDR-TB | lineage2.2.1 | None | SRR6484989 | MDR-TB | lineage2.2.1 | None | ERR3639789 | MDR-TB | lineage2.2.1 | None | SRR23310877 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068560 | MDR-TB | lineage2.2.1 | None | SRR10380136 | MDR-TB | lineage2.2.1 | None | ERR11798587 | MDR-TB | lineage2.2.1 | None | ERR4828855 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10380196 | MDR-TB | lineage2.2.1 | None | ERR11798582 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975675 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866538 | RR-TB | lineage2.2.1 | None | SRR14782802 | MDR-TB | lineage2.2.1 | None | ERR067643 | MDR-TB | lineage2.2.1 | ru | ERR7975629 | XDR-TB | lineage2.2.1 | None | ERR067630 | MDR-TB | lineage2.2.1 | ru | SRR25206956 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774364 | MDR-TB | lineage4.1 | None | ERR9806983 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088326 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828967 | MDR-TB | lineage2.2.1 | None | SRR18714890 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802230 | MDR-TB | lineage2.2.1 | None | SRR6832272 | HR-TB | lineage2.2.1 | None | SRR24256266 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498401 | MDR-TB | lineage2.2.1 | None | SRR28351623 | MDR-TB | lineage2.2.1 | None | SRR28351399 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351525 | MDR-TB | lineage2.2.1 | None | SRR28351499 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498582 | MDR-TB | lineage2.2.1 | None | SRR28351620 | MDR-TB | lineage2.2.1 | None | ERR2510528 | MDR-TB | lineage2.2.1 | pk | ERR4872327 | Pre-XDR-TB | lineage4.2.1 | None | SRR24256337 | MDR-TB | lineage2.2.1 | None | ERR2517024 | MDR-TB | lineage3 | gb | SRR24256034 | MDR-TB | lineage2.2.1 | None | ERR11798585 | MDR-TB | lineage2.2.1 | None | ERR4872343 | Pre-XDR-TB | lineage2.2.1 | None | SRR7585398 | Pre-XDR-TB | lineage3 | in | SRR23310867 | MDR-TB | lineage2.2.1 | None | SRR14807524 | MDR-TB | lineage2.2.1 | None | ERR2600463 | MDR-TB | lineage2.2.1 | None | SRR14801881 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832827 | MDR-TB | lineage2.2.1 | None | ERR7910976 | MDR-TB | lineage2.2.1 | md | ERR11068889 | MDR-TB | lineage2.2.1 | None | ERR4872293 | XDR-TB | lineage2.2.1 | None | ERR4828857 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR144619 | MDR-TB | lineage2.2.1 | ru | SRR14801687 | MDR-TB | lineage2.2.1 | None | SRR14782110 | MDR-TB | lineage2.2.1 | None | ERR10762364 | MDR-TB | lineage2.2.1 | None | SRR18715302 | MDR-TB | lineage2.2.1 | None | ERR2516160 | MDR-TB | lineage2.2.1 | es | SRR22873610 | Pre-XDR-TB | lineage2.2.1 | None | DRR454969 | MDR-TB | lineage2.2.1.1 | None | SRR25207235 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025751 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256296 | MDR-TB | lineage2.2.1 | None | SRR10380092 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088557 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068892 | MDR-TB | lineage2.2.1 | None | ERR4553760 | MDR-TB | lineage1.1.3 | None | ERR3287851 | MDR-TB | lineage4.3.4.2 | pe | ERR1034861 | Pre-XDR-TB | lineage2.2.1 | pt | ERR7911220 | MDR-TB | lineage2.2.1 | md | ERR3794477 | MDR-TB | lineage2.2.1 | None | ERR067761 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6964574 | MDR-TB | lineage3 | None | SRR6832020 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872313 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828819 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3639721 | MDR-TB | lineage2.2.1 | None | SRR18715279 | Pre-XDR-TB | lineage2.2.1 | None | SRR27107240 | MDR-TB | lineage4.3.3 | None | ERR7910917 | MDR-TB | lineage4.2.1 | None | ERR11043317 | MDR-TB | lineage4.2.1 | None | ERR7975677 | MDR-TB | lineage2.2.1 | None | ERR552321 | MDR-TB | lineage4.2.1 | None | ERR7975648 | MDR-TB | lineage2.2.1 | None | SRR14801505 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911257 | MDR-TB | lineage2.2.1 | md | ERR11068477 | MDR-TB | lineage2.2.1 | None | SRR25515366 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762272 | MDR-TB | lineage2.2.1 | None | ERR11798583 | MDR-TB | lineage2.2.1 | None | ERR552321_ERR552322 | MDR-TB | lineage4.2.1 | None | SRR6832519 | MDR-TB | lineage2.2.1 | None | SRR7755755 | MDR-TB | lineage2.2.1 | None | ERR10762259 | MDR-TB | lineage2.2.1 | None | SRR18714829 | MDR-TB | lineage2.2.1 | None | DRR184884 | MDR-TB | lineage2.2.1 | vn | SRR16088590 | MDR-TB | lineage2.2.1 | None | SRR7645888 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067574 | MDR-TB | lineage2.2.1 | None | ERR2446278 | MDR-TB | lineage2.2.1 | nl | SRR23310871 | HR-TB | lineage2.2.1 | None | SRR14801295 | MDR-TB | lineage2.2.1 | None | SRR20632779 | Pre-XDR-TB | lineage2.2.2 | None | SRR24255875 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715283 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832444 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715471 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087895 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872264 | XDR-TB | lineage2.2.1 | None | SRR18715135 | MDR-TB | lineage2.2.1 | None | SRR16088408 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255974 | MDR-TB | lineage2.2.1 | None | ERR11044662 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632807 | Pre-XDR-TB | lineage2.2.2 | None | SRR14781957 | MDR-TB | lineage2.2.1 | None | ERR229984 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11082744 | MDR-TB | lineage2.2.1 | None | ERR3794529 | MDR-TB | lineage2.2.1 | None | SRR23311013 | HR-TB | lineage4.2.1 | None | SRR25395610 | MDR-TB | lineage2.2.1 | None | SRR28498563 | MDR-TB | lineage2.2.1 | None | SRR28351498 | MDR-TB | lineage2.2.1 | None | ERR4553466 | MDR-TB | None | SRR28351374 | XDR-TB | lineage2.2.1 | None | SRR28498708 | XDR-TB | lineage2.2.1 | None | SRR28923833 | MDR-TB | lineage2.2.2 | None | SRR28498577 | MDR-TB | lineage2.2.1 | None | SRR28351378 | MDR-TB | lineage2.2.1 | None | SRR28351216 | Pre-XDR-TB | lineage4.2.1 | None | SRR28498419 | MDR-TB | lineage2.2.1 | None | SRR28045916 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28498383 | Pre-XDR-TB | lineage2.2 | None | ERR2510265 | Pre-XDR-TB | lineage2.2.1 | pk | ERR4829945 | MDR-TB | lineage3 | pk | ERR2706928 | MDR-TB | lineage5.2 | cd | SRR14802094 | MDR-TB | lineage2.2.1 | None | SRR7645947 | MDR-TB | lineage2.2.1 | None | SRR6831833 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715285 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782333 | HR-TB | lineage2.2.1 | None | SRR18715112 | MDR-TB | lineage2.2.1 | None | SRR14801666 | MDR-TB | lineage2.2.1 | None | ERR4829168 | MDR-TB | lineage2.2.1 | it | ERR4872326 | MDR-TB | lineage2.2.1 | None | ERR5865601 | MDR-TB | lineage2.2.1 | None | ERR4822420 | MDR-TB | lineage2.2.1 | ua | ERR4798843 | XDR-TB | lineage4.2.2.2 | in | SRR6832390 | MDR-TB | lineage2.2.1 | None | SRR24256050 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794376 | MDR-TB | lineage2.2.1 | None | ERR11466369 | MDR-TB | lineage4.1.1.3 | None | ERR2517193 | MDR-TB | lineage2.2.1 | nl | ERR4827662 | MDR-TB | lineage2.2.1 | None | ERR8025655 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782030 | MDR-TB | lineage2.2.1 | None | ERR5866539 | HR-TB | lineage2.2.1 | None | ERR5865958 | MDR-TB | lineage4.1 | None | SRR18715101 | MDR-TB | lineage2.2.1 | None | ERR4872279 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782602 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807751 | MDR-TB | lineage2.2.1 | None | SRR23310851 | MDR-TB | lineage4.2.1 | None | SRR16088333 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762393 | MDR-TB | lineage2.2.1 | None | ERR229931 | MDR-TB | lineage2.2.1 | ru | SRR27107297 | MDR-TB | lineage4.3.3 | None | SRR14802065 | MDR-TB | lineage2.2.1 | None | SRR13243567 | XDR-TB | lineage2.2.1 | None | ERR11068891 | MDR-TB | lineage2.2.1 | None | SRR18715330 | MDR-TB | lineage2.2.1 | None | SRR24255896 | MDR-TB | lineage2.2.1 | None | SRR7755721 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715463 | MDR-TB | lineage2.2.1 | None | ERR7911052 | MDR-TB | lineage2.2.1 | md | SRR14782420 | HR-TB | lineage2.2.1 | None | ERR067621 | MDR-TB | lineage2.2.1 | ru | ERR9806984 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275511 | MDR-TB | lineage2.2.1 | nl | SRR7781496 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR10762429 | MDR-TB | lineage4.2.1 | None | SRR23340097 | MDR-TB | lineage2.2.1 | None | SRR18714910 | MDR-TB | lineage2.2.1 | None | ERR11798588 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822296 | MDR-TB | lineage2.2.1 | de | ERR10762304 | Pre-XDR-TB | lineage4.2.1 | None | SRR13449603 | HR-TB | lineage4.3.3 | None | ERR3794457 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911265 | MDR-TB | lineage4.2.1 | md | ERR11798580 | MDR-TB | lineage2.2.1 | None | ERR9121304 | MDR-TB | lineage2.2.1 | None | ERR4813822 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4 | None | SRR23861775 | MDR-TB | lineage2.2.1 | None | SRR10380159 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798589 | MDR-TB | lineage2.2.1 | None | ERR2677470 | MDR-TB | lineage4.3.4.2 | de | SRR24256155 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782601 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311062 | MDR-TB | lineage4.2.1 | None | ERR2600544 | MDR-TB | lineage2.2.1;lineage4.1;lineage4.3.3 | None | SRR24256307 | MDR-TB | lineage2.2.1 | None | SAMN02567762 | MDR-TB | lineage8 | None | ERR7910968 | MDR-TB | lineage2.2.1 | md | ERR11798590 | MDR-TB | lineage2.2.1 | None | ERR11068214 | MDR-TB | lineage2.2.1 | None | ERR552322 | MDR-TB | lineage4.2.1 | None | SRR7755668 | Pre-XDR-TB | lineage4.2.1 | None | SRR18714870 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798586 | MDR-TB | lineage2.2.1 | None | ERR4829376 | Pre-XDR-TB | lineage2.2.1 | it | SRR14801291 | MDR-TB | lineage2.2.1 | None | SRR23310958 | MDR-TB | lineage2.2.1 | None | SRR13243561 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088542 | MDR-TB | lineage2.2.1 | None | ERR7911091 | MDR-TB | lineage2.2.1 | md | ERR11068679 | MDR-TB | lineage2.2.1 | None | ERR7911061 | MDR-TB | lineage2.2.1 | md | SAMEA2534564 | MDR-TB | lineage4.2.1 | uz | ERR1193763 | MDR-TB | lineage4.3 | np | SRR16088549 | MDR-TB | lineage2.2.1 | None | SRR6484981 | HR-TB | lineage4.2.1.1 | None | SRR28498704 | MDR-TB | lineage2.2.1 | None | SRR28351518 | MDR-TB | lineage4.2.1;lineage4.8 | None | ERR4553817 | MDR-TB | None | SRR28498652 | MDR-TB | lineage2.2.1 | None | ERR11773839 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351526 | Pre-XDR-TB | lineage3 | None | SRR28706496 | XDR-TB | lineage4.2.1 | None | ERR3335723 | Pre-XDR-TB | lineage3 | pk | ERR10762329 | MDR-TB | lineage2.2.1 | None | SRR7645804 | MDR-TB | lineage2.2.1 | None | SRR8351921 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762430 | MDR-TB | lineage2.2.1 | None | ERR2707206 | MDR-TB | lineage4.6.1.2 | cd | SRR22175219 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR7910903 | MDR-TB | lineage2.2.1 | md | ERR8025660 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040437 | MDR-TB | lineage4.5 | None | ERR1199127 | MDR-TB | lineage4.6.1.2 | cd | SRR23310909 | MDR-TB | lineage2.2.1 | None | ERR3794455 | MDR-TB | lineage2.2.1 | None | SRR24256187 | Pre-XDR-TB | lineage2.2.1 | None | ERR2984802 | MDR-TB | lineage4.3.4.1 | None | SRR16149142 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR6832387 | MDR-TB | lineage2.2.1 | None | ERR11068909 | Pre-XDR-TB | lineage3 | None | SRR23310894 | MDR-TB | lineage2.2.1 | None | SRR5153912 | MDR-TB | lineage2.2.1 | None | SRR24256128 | MDR-TB | lineage2.2.1 | None | SRR27107273 | Pre-XDR-TB | lineage4.3.3 | None | SRR16087881 | XDR-TB | lineage2.2.1 | None | ERR11798584 | MDR-TB | lineage2.2.1 | None | SRR14802068 | MDR-TB | lineage2.2.1 | None | ERR5865600 | MDR-TB | lineage2.2.1 | None | ERR4195753 | MDR-TB | lineage2.2.1 | None | SRR6832528 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256257 | MDR-TB | lineage2.2.1 | None | SRR10380170 | MDR-TB | lineage2.2.1 | None |
|---|
