Rv3794 - c.-8C>A


Drug resistance types
0 Sensitive 1 RR-TB 9 HR-TB 185 MDR-TB 83 Pre-XDR-TB 11 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 226
lineage4.1.1.3 2
lineage3 7
lineage4.3.3 4
lineage4.1 4
lineage4.2.1 17
lineage4.2.2.2 2
lineage2.2.2 3
lineage2.2.1;lineage4.1;lineage4.3.3 1
lineage8 1
lineage4.2.1.1 1
lineage4.2.1;lineage4.8 1
lineage2.2.1;lineage4.2.2.2 1
lineage4.2.2.1 1
lineage1.1.3 1
lineage4.3.4.2 2
lineage4.1.2.1;lineage4.3.4 1
2
lineage2.2 1
lineage4.1.2.1 4
lineage2.2.1.1 1
lineage5.2 1
lineage4.3 1
lineage4.6.1.2 2
lineage4.5 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 289
Geographic prevalence
Country level data for this variant is available for 45 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6832390 MDR-TB lineage2.2.1 None
ERR11068889 MDR-TB lineage2.2.1 None
SRR24256050 Pre-XDR-TB lineage2.2.1 None
ERR11466369 MDR-TB lineage4.1.1.3 None
ERR11068909 Pre-XDR-TB lineage3 None
ERR8025655 Pre-XDR-TB lineage2.2.1 None
SRR5153912 MDR-TB lineage2.2.1 None
SRR14801687 MDR-TB lineage2.2.1 None
SRR14782110 MDR-TB lineage2.2.1 None
SRR27107273 Pre-XDR-TB lineage4.3.3 None
ERR5865958 MDR-TB lineage4.1 None
ERR8025751 Pre-XDR-TB lineage2.2.1 None
SRR14782602 Pre-XDR-TB lineage2.2.1 None
SRR6807751 MDR-TB lineage2.2.1 None
ERR4195753 MDR-TB lineage2.2.1 None
SRR16088557 Pre-XDR-TB lineage2.2.1 None
SRR6832528 Pre-XDR-TB lineage2.2.1 None
SRR23310851 MDR-TB lineage4.2.1 None
ERR1034861 Pre-XDR-TB lineage2.2.1 pt
SRR6964574 MDR-TB lineage3 None
SRR18715330 MDR-TB lineage2.2.1 None
SRR24255896 MDR-TB lineage2.2.1 None
SRR7755721 Pre-XDR-TB lineage2.2.1 None
SRR6832020 Pre-XDR-TB lineage2.2.1 None
ERR7975630 MDR-TB lineage2.2.1 None
SRR14782420 HR-TB lineage2.2.1 None
ERR9806984 Pre-XDR-TB lineage2.2.1 None
SRR27107240 MDR-TB lineage4.3.3 None
ERR7910917 MDR-TB lineage4.2.1 None
SRR23339961 MDR-TB lineage2.2.1 None
ERR4800309 XDR-TB lineage4.2.2.2 in
ERR7975677 MDR-TB lineage2.2.1 None
SRR23340097 MDR-TB lineage2.2.1 None
ERR552321 MDR-TB lineage4.2.1 None
ERR11798588 Pre-XDR-TB lineage2.2.1 None
ERR8774365 MDR-TB lineage4.1 None
SRR14801505 Pre-XDR-TB lineage2.2.1 None
ERR7911257 MDR-TB lineage2.2.1 md
ERR4822296 MDR-TB lineage2.2.1 de
SRR6832519 MDR-TB lineage2.2.1 None
ERR10762304 Pre-XDR-TB lineage4.2.1 None
SRR13449603 HR-TB lineage4.3.3 None
ERR3639755 Pre-XDR-TB lineage2.2.1 None
ERR7911265 MDR-TB lineage4.2.1 md
SRR18714829 MDR-TB lineage2.2.1 None
ERR11798580 MDR-TB lineage2.2.1 None
ERR3335723 Pre-XDR-TB lineage3 pk
SRR7645888 Pre-XDR-TB lineage2.2.1 None
SRR24256155 Pre-XDR-TB lineage2.2.1 None
SRR14801295 MDR-TB lineage2.2.1 None
ERR11068012 MDR-TB lineage2.2.1 None
SRR23311062 MDR-TB lineage4.2.1 None
SRR20632779 Pre-XDR-TB lineage2.2.2 None
ERR4872357 MDR-TB lineage2.2.1 None
ERR2600544 MDR-TB lineage2.2.1;lineage4.1;lineage4.3.3 None
SRR24255875 Pre-XDR-TB lineage2.2.1 None
SAMN02567762 MDR-TB lineage8 None
ERR7910968 MDR-TB lineage2.2.1 md
SRR6484989 MDR-TB lineage2.2.1 None
ERR3639789 MDR-TB lineage2.2.1 None
ERR2510265 Pre-XDR-TB lineage2.2.1 pk
ERR11068560 MDR-TB lineage2.2.1 None
SRR10380136 MDR-TB lineage2.2.1 None
SRR18715471 Pre-XDR-TB lineage2.2.1 None
SRR7755668 Pre-XDR-TB lineage4.2.1 None
SRR18715135 MDR-TB lineage2.2.1 None
ERR11798586 MDR-TB lineage2.2.1 None
SRR10380196 MDR-TB lineage2.2.1 None
ERR11798582 Pre-XDR-TB lineage2.2.1 None
ERR4829376 Pre-XDR-TB lineage2.2.1 it
ERR067630 MDR-TB lineage2.2.1 ru
SRR23310958 MDR-TB lineage2.2.1 None
SRR20632807 Pre-XDR-TB lineage2.2.2 None
SRR25206956 Pre-XDR-TB lineage2.2.1 None
ERR8774364 MDR-TB lineage4.1 None
SRR16088542 MDR-TB lineage2.2.1 None
ERR11068679 MDR-TB lineage2.2.1 None
ERR9806983 Pre-XDR-TB lineage2.2.1 None
ERR7911061 MDR-TB lineage2.2.1 md
ERR11082744 MDR-TB lineage2.2.1 None
ERR3794529 MDR-TB lineage2.2.1 None
SRR6484981 HR-TB lineage4.2.1.1 None
SRR6832272 HR-TB lineage2.2.1 None
SRR24256266 Pre-XDR-TB lineage2.2.1 None
SRR28498704 MDR-TB lineage2.2.1 None
SRR28351518 MDR-TB lineage4.2.1;lineage4.8 None
SRR28351374 XDR-TB lineage2.2.1 None
SRR28498708 XDR-TB lineage2.2.1 None
SRR28045916 Pre-XDR-TB lineage4.1.1.3 None
SRR28498582 MDR-TB lineage2.2.1 None
SRR7645947 MDR-TB lineage2.2.1 None
SRR6831833 Pre-XDR-TB lineage2.2.1 None
ERR4872327 Pre-XDR-TB lineage4.2.1 None
SRR14782333 HR-TB lineage2.2.1 None
ERR2517024 MDR-TB lineage3 gb
ERR10762430 MDR-TB lineage2.2.1 None
SRR22175219 XDR-TB lineage2.2.1;lineage4.2.2.2 None
ERR4829168 MDR-TB lineage2.2.1 it
SRR7585398 Pre-XDR-TB lineage3 in
ERR4822420 MDR-TB lineage2.2.1 ua
ERR2517193 MDR-TB lineage2.2.1 nl
SRR16149142 Pre-XDR-TB lineage4.2.2.1 None
ERR4872293 XDR-TB lineage2.2.1 None
ERR144619 MDR-TB lineage2.2.1 ru
SRR23310894 MDR-TB lineage2.2.1 None
ERR5866539 HR-TB lineage2.2.1 None
SRR18715302 MDR-TB lineage2.2.1 None
ERR2516160 MDR-TB lineage2.2.1 es
SRR22873610 Pre-XDR-TB lineage2.2.1 None
SRR16087881 XDR-TB lineage2.2.1 None
SRR18715101 MDR-TB lineage2.2.1 None
SRR10380092 Pre-XDR-TB lineage2.2.1 None
ERR5865600 MDR-TB lineage2.2.1 None
ERR4553760 MDR-TB lineage1.1.3 None
ERR3287851 MDR-TB lineage4.3.4.2 pe
ERR10762393 MDR-TB lineage2.2.1 None
ERR229931 MDR-TB lineage2.2.1 ru
ERR7911220 MDR-TB lineage2.2.1 md
SRR24256257 MDR-TB lineage2.2.1 None
SRR18715463 MDR-TB lineage2.2.1 None
ERR7911052 MDR-TB lineage2.2.1 md
ERR2516356 MDR-TB lineage2.2.1 be
ERR3639721 MDR-TB lineage2.2.1 None
ERR4276909 MDR-TB lineage2.2.1 None
ERR7911242 MDR-TB lineage2.2.1 md
ERR10762429 MDR-TB lineage4.2.1 None
SRR18714910 MDR-TB lineage2.2.1 None
ERR7975648 MDR-TB lineage2.2.1 None
ERR552321_ERR552322 MDR-TB lineage4.2.1 None
SRR24256139 MDR-TB lineage2.2.1 None
ERR3794457 Pre-XDR-TB lineage2.2.1 None
SRR6832144 MDR-TB lineage2.2.1 None
SRR10397114 MDR-TB lineage4.1 None
ERR4276850 MDR-TB lineage2.2.1 None
DRR184884 MDR-TB lineage2.2.1 vn
SRR14782599 Pre-XDR-TB lineage2.2.1 None
ERR4829822 MDR-TB lineage2.2.1 None
SRR16088590 MDR-TB lineage2.2.1 None
ERR9121304 MDR-TB lineage2.2.1 None
ERR7910978 MDR-TB lineage2.2.1 md
ERR4813822 Pre-XDR-TB lineage4.1.2.1;lineage4.3.4 None
SRR23861775 MDR-TB lineage2.2.1 None
ERR3794407 HR-TB lineage2.2.1 None
ERR11798589 MDR-TB lineage2.2.1 None
SRR24256032 Pre-XDR-TB lineage2.2.1 None
SRR14782601 Pre-XDR-TB lineage2.2.1 None
SRR14801510 MDR-TB lineage2.2.1 None
SRR24256307 MDR-TB lineage2.2.1 None
SRR18715283 Pre-XDR-TB lineage2.2.1 None
SRR6832444 Pre-XDR-TB lineage2.2.1 None
ERR11798590 MDR-TB lineage2.2.1 None
ERR11798587 MDR-TB lineage2.2.1 None
ERR552322 MDR-TB lineage4.2.1 None
SRR16087895 Pre-XDR-TB lineage2.2.1 None
ERR4872264 XDR-TB lineage2.2.1 None
SRR18714870 Pre-XDR-TB lineage2.2.1 None
SRR24255974 MDR-TB lineage2.2.1 None
ERR5866538 RR-TB lineage2.2.1 None
ERR067643 MDR-TB lineage2.2.1 ru
SRR14801291 MDR-TB lineage2.2.1 None
ERR7975629 XDR-TB lineage2.2.1 None
SRR13243561 Pre-XDR-TB lineage2.2.1 None
ERR4829945 MDR-TB lineage3 pk
SRR14781957 MDR-TB lineage2.2.1 None
ERR229984 Pre-XDR-TB lineage2.2.1 ru
SAMEA2534564 MDR-TB lineage4.2.1 uz
SRR16088549 MDR-TB lineage2.2.1 None
SRR16088326 Pre-XDR-TB lineage2.2.1 None
SRR23311013 HR-TB lineage4.2.1 None
SRR25395610 MDR-TB lineage2.2.1 None
SRR28498401 MDR-TB lineage2.2.1 None
ERR4553817 MDR-TB None
SRR28498563 MDR-TB lineage2.2.1 None
SRR28351498 MDR-TB lineage2.2.1 None
ERR4553466 MDR-TB None
SRR28351623 MDR-TB lineage2.2.1 None
SRR28351216 Pre-XDR-TB lineage4.2.1 None
SRR28351399 Pre-XDR-TB lineage2.2.1 None
SRR28351525 MDR-TB lineage2.2.1 None
SRR28498419 MDR-TB lineage2.2.1 None
SRR28351499 Pre-XDR-TB lineage2.2.1 None
SRR28498383 Pre-XDR-TB lineage2.2 None
SRR28351526 Pre-XDR-TB lineage3 None
SRR28351620 MDR-TB lineage2.2.1 None
ERR10762329 MDR-TB lineage2.2.1 None
SRR18715285 Pre-XDR-TB lineage2.2.1 None
SRR18715112 MDR-TB lineage2.2.1 None
SRR8351921 Pre-XDR-TB lineage2.2.1 None
SRR24256034 MDR-TB lineage2.2.1 None
ERR11798585 MDR-TB lineage2.2.1 None
SRR14801666 MDR-TB lineage2.2.1 None
SRR23310867 MDR-TB lineage2.2.1 None
ERR7910903 MDR-TB lineage2.2.1 md
ERR4872326 MDR-TB lineage2.2.1 None
SRR24256187 Pre-XDR-TB lineage2.2.1 None
SRR14807524 MDR-TB lineage2.2.1 None
ERR2600463 MDR-TB lineage2.2.1 None
SRR14801881 Pre-XDR-TB lineage2.2.1 None
SRR6832827 MDR-TB lineage2.2.1 None
ERR3794376 MDR-TB lineage2.2.1 None
ERR4827662 MDR-TB lineage2.2.1 None
SRR6832387 MDR-TB lineage2.2.1 None
ERR4828857 Pre-XDR-TB lineage4.1.2.1 None
SRR14782030 MDR-TB lineage2.2.1 None
SRR24256128 MDR-TB lineage2.2.1 None
ERR10762364 MDR-TB lineage2.2.1 None
ERR11798584 MDR-TB lineage2.2.1 None
DRR454969 MDR-TB lineage2.2.1.1 None
ERR4872279 Pre-XDR-TB lineage2.2.1 None
SRR25207235 Pre-XDR-TB lineage2.2.1 None
SRR14802068 MDR-TB lineage2.2.1 None
SRR24256296 MDR-TB lineage2.2.1 None
SRR16088333 Pre-XDR-TB lineage2.2.1 None
ERR11068892 MDR-TB lineage2.2.1 None
ERR3794477 MDR-TB lineage2.2.1 None
SRR27107297 MDR-TB lineage4.3.3 None
SRR14802065 MDR-TB lineage2.2.1 None
SRR13243567 XDR-TB lineage2.2.1 None
ERR067761 Pre-XDR-TB lineage2.2.1 ru
ERR11068891 MDR-TB lineage2.2.1 None
SRR10380170 MDR-TB lineage2.2.1 None
ERR4810982 Pre-XDR-TB lineage2.2.1 cn
ERR4872313 Pre-XDR-TB lineage2.2.1 None
ERR4828819 Pre-XDR-TB lineage4.1.2.1 None
ERR067621 MDR-TB lineage2.2.1 ru
SRR24256294 MDR-TB lineage2.2.1 None
ERR3275511 MDR-TB lineage2.2.1 nl
SRR18715279 Pre-XDR-TB lineage2.2.1 None
ERR10762301 MDR-TB lineage2.2.1 None
SRR7781496 Pre-XDR-TB lineage4.1.2.1 None
SRR7755706 MDR-TB lineage4.2.1 None
ERR11043317 MDR-TB lineage4.2.1 None
ERR11068477 MDR-TB lineage2.2.1 None
SRR23861879 Pre-XDR-TB lineage2.2.1 None
SRR25515366 Pre-XDR-TB lineage2.2.1 None
ERR10762272 MDR-TB lineage2.2.1 None
ERR11798583 MDR-TB lineage2.2.1 None
ERR11798581 Pre-XDR-TB lineage2.2.1 None
ERR2706928 MDR-TB lineage5.2 cd
SRR7755755 MDR-TB lineage2.2.1 None
SRR14802067 MDR-TB lineage2.2.1 None
ERR10762259 MDR-TB lineage2.2.1 None
SRR16087886 MDR-TB lineage2.2.1 None
ERR403303 MDR-TB lineage2.2.1 None
SRR23310876 MDR-TB lineage2.2.1 None
ERR3794527 MDR-TB lineage2.2.1 None
SRR10379973 Pre-XDR-TB lineage2.2.1 None
SRR6832223 MDR-TB lineage2.2.1 None
SRR14782205 MDR-TB lineage2.2.1 None
SRR10380159 Pre-XDR-TB lineage2.2.1 None
ERR11067574 MDR-TB lineage2.2.1 None
ERR2446278 MDR-TB lineage2.2.1 nl
ERR2677470 MDR-TB lineage4.3.4.2 de
SRR23310871 HR-TB lineage2.2.1 None
SRR24256374 Pre-XDR-TB lineage2.2.1 None
SRR6807750 MDR-TB lineage2.2.1 None
SRR23310877 Pre-XDR-TB lineage2.2.1 None
ERR11068214 MDR-TB lineage2.2.1 None
ERR4828855 Pre-XDR-TB lineage4.1.2.1 None
SRR16088408 Pre-XDR-TB lineage2.2.1 None
ERR7975675 Pre-XDR-TB lineage2.2.1 None
SRR14782802 MDR-TB lineage2.2.1 None
ERR11044662 Pre-XDR-TB lineage2.2.1 None
ERR7911091 MDR-TB lineage2.2.1 md
ERR1193763 MDR-TB lineage4.3 np
ERR4828967 MDR-TB lineage2.2.1 None
SRR18714890 Pre-XDR-TB lineage2.2.1 None
SRR14802230 MDR-TB lineage2.2.1 None
ERR2510528 MDR-TB lineage2.2.1 pk
SRR28923833 MDR-TB lineage2.2.2 None
SRR28498577 MDR-TB lineage2.2.1 None
SRR28498652 MDR-TB lineage2.2.1 None
SRR28351378 MDR-TB lineage2.2.1 None
ERR11773839 Pre-XDR-TB lineage2.2.1 None
SRR28706496 XDR-TB lineage4.2.1 None
SRR14802094 MDR-TB lineage2.2.1 None
SRR24256337 MDR-TB lineage2.2.1 None
SRR7645804 MDR-TB lineage2.2.1 None
ERR2707206 MDR-TB lineage4.6.1.2 cd
ERR4872343 Pre-XDR-TB lineage2.2.1 None
ERR8025660 Pre-XDR-TB lineage2.2.1 None
SRR10040437 MDR-TB lineage4.5 None
ERR1199127 MDR-TB lineage4.6.1.2 cd
SRR23310909 MDR-TB lineage2.2.1 None
ERR3794455 MDR-TB lineage2.2.1 None
ERR5865601 MDR-TB lineage2.2.1 None
ERR2984802 MDR-TB lineage4.3.4.1 None
ERR4798843 XDR-TB lineage4.2.2.2 in
ERR7910976 MDR-TB lineage2.2.1 md