Rv3794 - c.-8C>A


Drug resistance types
0 Sensitive 2 RR-TB 10 HR-TB 226 MDR-TB 103 Pre-XDR-TB 13 XDR-TB 1 Other
lineage Counts
lineage Count
lineage2.2.1 281
2
lineage4.2.1 19
lineage4.1 4
lineage5.2 2
lineage4.3 1
lineage3 10
lineage4.3.3 5
lineage4.2.2.2 3
lineage2.2 1
lineage4.1.2.1 4
lineage2.2.1;lineage4.2.2.2 1
lineage4.6.1.2 3
lineage2.2.2 4
lineage8 1
lineage4.5 1
lineage4.1.1.3 2
lineage4.3.4.2 2
lineage2.2.1.1 1
lineage1.2.1.2.1 1
lineage4.2.1.1 1
lineage2.2.1;lineage4.1;lineage4.3.3 1
lineage4.1.2.1;lineage4.3.4 1
lineage4.3.4.1 1
lineage4.2.2.1 1
lineage4.2.1;lineage4.8 1
lineage1.1.3 1
spoligotype Counts
spoligotype Count
None 355
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11068891 MDR-TB lineage2.2.1 None
SRR10380170 MDR-TB lineage2.2.1 None
SRR18715330 MDR-TB lineage2.2.1 None
ERR3794407 HR-TB lineage2.2.1 None
ERR4810982 Pre-XDR-TB lineage2.2.1 cn
SRR6832020 Pre-XDR-TB lineage2.2.1 None
ERR3639721 MDR-TB lineage2.2.1 None
ERR4553817 MDR-TB None
ERR4276909 MDR-TB lineage2.2.1 None
ERR4872293 XDR-TB lineage2.2.1 None
ERR7910917 MDR-TB lineage4.2.1 None
ERR552322 MDR-TB lineage4.2.1 None
ERR13285845 Pre-XDR-TB lineage4.2.1 None
SRR29539716 MDR-TB lineage2.2.1 None
ERR11798588 Pre-XDR-TB lineage2.2.1 None
ERR8774365 MDR-TB lineage4.1 None
SRR18714910 MDR-TB lineage2.2.1 None
SRR28498577 MDR-TB lineage2.2.1 None
ERR2706928 MDR-TB lineage5.2 cd
SRR24256139 MDR-TB lineage2.2.1 None
SRR6832144 MDR-TB lineage2.2.1 None
ERR3794457 Pre-XDR-TB lineage2.2.1 None
ERR5866539 HR-TB lineage2.2.1 None
SRR7755755 MDR-TB lineage2.2.1 None
SRR16088408 Pre-XDR-TB lineage2.2.1 None
SRR29539015 MDR-TB lineage2.2.1 None
ERR4276850 MDR-TB lineage2.2.1 None
DRR184884 MDR-TB lineage2.2.1 vn
SRR23310876 MDR-TB lineage2.2.1 None
ERR3794527 MDR-TB lineage2.2.1 None
SRR23310877 Pre-XDR-TB lineage2.2.1 None
SRR29539215 MDR-TB lineage2.2.1 None
SRR24255875 Pre-XDR-TB lineage2.2.1 None
ERR144619 MDR-TB lineage2.2.1 ru
ERR4872264 XDR-TB lineage2.2.1 None
ERR4872343 Pre-XDR-TB lineage2.2.1 None
ERR3275511 MDR-TB lineage2.2.1 nl
ERR7975675 Pre-XDR-TB lineage2.2.1 None
SRR14801291 MDR-TB lineage2.2.1 None
ERR7975629 XDR-TB lineage2.2.1 None
SRR25206956 Pre-XDR-TB lineage2.2.1 None
ERR5866538 RR-TB lineage2.2.1 None
ERR10762430 MDR-TB lineage2.2.1 None
ERR11082744 MDR-TB lineage2.2.1 None
SRR14802067 MDR-TB lineage2.2.1 None
ERR1193763 MDR-TB lineage4.3 np
SRR28351499 Pre-XDR-TB lineage2.2.1 None
SRR28351620 MDR-TB lineage2.2.1 None
ERR2510265 Pre-XDR-TB lineage2.2.1 pk
SRR29539318 MDR-TB lineage2.2.1 None
SRR29539404 Pre-XDR-TB lineage2.2.1 None
SRR29539608 MDR-TB lineage2.2.1 None
SRR29539646 MDR-TB lineage2.2.1 None
SRR29539757 Pre-XDR-TB lineage2.2.1 None
SRR29539789 Pre-XDR-TB lineage2.2.1 None
SRR29681410 MDR-TB lineage2.2.1 None
SRR29231326 MDR-TB lineage5.2 None
ERR4827662 MDR-TB lineage2.2.1 None
ERR4872326 MDR-TB lineage2.2.1 None
SRR28351399 Pre-XDR-TB lineage2.2.1 None
ERR11798582 Pre-XDR-TB lineage2.2.1 None
SRR16088590 MDR-TB lineage2.2.1 None
SRR14782802 MDR-TB lineage2.2.1 None
SRR14802065 MDR-TB lineage2.2.1 None
SRR29016855 MDR-TB lineage3 None
SRR6832390 MDR-TB lineage2.2.1 None
SRR29539307 Pre-XDR-TB lineage2.2.1 None
SRR29539638 RR-TB lineage2.2.1 None
SRR27107297 MDR-TB lineage4.3.3 None
SRR28351216 Pre-XDR-TB lineage4.2.1 None
ERR5865600 MDR-TB lineage2.2.1 None
ERR10762429 MDR-TB lineage4.2.1 None
SRR29681273 MDR-TB lineage2.2.1 None
SRR28498419 MDR-TB lineage2.2.1 None
SRR18715463 MDR-TB lineage2.2.1 None
ERR13285752 MDR-TB lineage2.2.1 None
SRR29538924 MDR-TB lineage2.2.1 None
SRR29681276 MDR-TB lineage2.2.1 None
SRR18715285 Pre-XDR-TB lineage2.2.1 None
SRR14782333 HR-TB lineage2.2.1 None
SRR6832519 MDR-TB lineage2.2.1 None
SRR24256034 MDR-TB lineage2.2.1 None
ERR11798585 MDR-TB lineage2.2.1 None
SRR7755706 MDR-TB lineage4.2.1 None
SRR23310867 MDR-TB lineage2.2.1 None
SRR27107240 MDR-TB lineage4.3.3 None
ERR1034861 Pre-XDR-TB lineage2.2.1 pt
ERR4798843 XDR-TB lineage4.2.2.2 in
SRR18715283 Pre-XDR-TB lineage2.2.1 None
SRR29539230 Pre-XDR-TB lineage2.2.1 None
SRR29539759 Pre-XDR-TB lineage2.2.1 None
ERR4822420 MDR-TB lineage2.2.1 ua
SRR28498383 Pre-XDR-TB lineage2.2 None
SRR29274277 MDR-TB lineage2.2.1 None
SRR29274766 MDR-TB lineage2.2.1 None
ERR7975648 MDR-TB lineage2.2.1 None
ERR11068214 MDR-TB lineage2.2.1 None
SRR23339961 MDR-TB lineage2.2.1 None
ERR5865958 MDR-TB lineage4.1 None
SRR18715101 MDR-TB lineage2.2.1 None
ERR7975677 MDR-TB lineage2.2.1 None
SRR14782602 Pre-XDR-TB lineage2.2.1 None
ERR4828819 Pre-XDR-TB lineage4.1.2.1 None
ERR11068892 MDR-TB lineage2.2.1 None
SRR24255974 MDR-TB lineage2.2.1 None
SRR24255896 MDR-TB lineage2.2.1 None
SRR7755721 Pre-XDR-TB lineage2.2.1 None
ERR3794529 MDR-TB lineage2.2.1 None
SRR18715279 Pre-XDR-TB lineage2.2.1 None
ERR5865601 MDR-TB lineage2.2.1 None
ERR552321 MDR-TB lineage4.2.1 None
ERR7911061 MDR-TB lineage2.2.1 md
ERR11798583 MDR-TB lineage2.2.1 None
SRR22175219 XDR-TB lineage2.2.1;lineage4.2.2.2 None
SRR25515366 Pre-XDR-TB lineage2.2.1 None
ERR552321_ERR552322 MDR-TB lineage4.2.1 None
SRR29231781 MDR-TB lineage4.6.1.2 None
SRR13449603 HR-TB lineage4.3.3 None
ERR4829822 MDR-TB lineage2.2.1 None
ERR7910976 MDR-TB lineage2.2.1 md
SRR16087886 MDR-TB lineage2.2.1 None
ERR13284833 MDR-TB lineage2.2.1 None
SRR18714829 MDR-TB lineage2.2.1 None
SRR14782420 HR-TB lineage2.2.1 None
SRR14782599 Pre-XDR-TB lineage2.2.1 None
ERR403303 MDR-TB lineage2.2.1 None
ERR3639755 Pre-XDR-TB lineage2.2.1 None
ERR9121304 MDR-TB lineage2.2.1 None
ERR7910978 MDR-TB lineage2.2.1 md
SRR29539707 Pre-XDR-TB lineage2.2.1 None
ERR4872327 Pre-XDR-TB lineage4.2.1 None
ERR7911257 MDR-TB lineage2.2.1 md
SRR14782601 Pre-XDR-TB lineage2.2.1 None
SRR23861775 MDR-TB lineage2.2.1 None
SRR6807750 MDR-TB lineage2.2.1 None
ERR11798580 MDR-TB lineage2.2.1 None
ERR7910968 MDR-TB lineage2.2.1 md
SRR6484989 MDR-TB lineage2.2.1 None
SRR14801666 MDR-TB lineage2.2.1 None
ERR4828855 Pre-XDR-TB lineage4.1.2.1 None
SRR7585398 Pre-XDR-TB lineage3 in
ERR067643 MDR-TB lineage2.2.1 ru
ERR067630 MDR-TB lineage2.2.1 ru
SRR14782030 MDR-TB lineage2.2.1 None
SRR14801687 MDR-TB lineage2.2.1 None
ERR11068560 MDR-TB lineage2.2.1 None
SRR29538963 Other lineage2.2.1 None
ERR11798590 MDR-TB lineage2.2.1 None
SRR10397114 MDR-TB lineage4.1 None
ERR10762259 MDR-TB lineage2.2.1 None
ERR4828967 MDR-TB lineage2.2.1 None
SRR14802230 MDR-TB lineage2.2.1 None
SRR6832272 HR-TB lineage2.2.1 None
SRR24256266 Pre-XDR-TB lineage2.2.1 None
SRR28498704 MDR-TB lineage2.2.1 None
SRR28498563 MDR-TB lineage2.2.1 None
ERR4553466 MDR-TB None
SRR10380159 Pre-XDR-TB lineage2.2.1 None
SRR28351378 MDR-TB lineage2.2.1 None
SRR24256050 Pre-XDR-TB lineage2.2.1 None
SRR28706496 XDR-TB lineage4.2.1 None
SRR7781496 Pre-XDR-TB lineage4.1.2.1 None
SRR29538961 Pre-XDR-TB lineage2.2.1 None
SRR29538967 MDR-TB lineage2.2.1 None
SRR29539187 MDR-TB lineage2.2.1 None
ERR7911052 MDR-TB lineage2.2.1 md
SRR29539352 MDR-TB lineage2.2.1 None
SRR29539356 Pre-XDR-TB lineage2.2.1 None
ERR8774364 MDR-TB lineage4.1 None
SRR28923834 MDR-TB lineage2.2.2 None
SRR29538985 Pre-XDR-TB lineage2.2.1 None
ERR11798581 Pre-XDR-TB lineage2.2.1 None
SRR29539003 MDR-TB lineage2.2.1 None
SRR29539790 Pre-XDR-TB lineage2.2.1 None
ERR11044662 Pre-XDR-TB lineage2.2.1 None
ERR13261174 XDR-TB lineage4.2.2.2 None
ERR229984 Pre-XDR-TB lineage2.2.1 ru
SRR10380092 Pre-XDR-TB lineage2.2.1 None
SRR10380196 MDR-TB lineage2.2.1 None
SRR29539214 Pre-XDR-TB lineage2.2.1 None
ERR4195753 MDR-TB lineage2.2.1 None
SRR7645947 MDR-TB lineage2.2.1 None
ERR11068679 MDR-TB lineage2.2.1 None
SRR29539703 Pre-XDR-TB lineage2.2.1 None
SRR29978524 MDR-TB lineage2.2.1 None
ERR10762301 MDR-TB lineage2.2.1 None
ERR2510528 MDR-TB lineage2.2.1 pk
SRR28498652 MDR-TB lineage2.2.1 None
SRR28351526 Pre-XDR-TB lineage3 None
ERR2446278 MDR-TB lineage2.2.1 nl
SRR10379973 Pre-XDR-TB lineage2.2.1 None
ERR4872279 Pre-XDR-TB lineage2.2.1 None
ERR13285841 MDR-TB lineage2.2.1 None
SAMN02567762 MDR-TB lineage8 None
ERR11798584 MDR-TB lineage2.2.1 None
ERR13285876 MDR-TB lineage4.2.1 None
SRR6831833 Pre-XDR-TB lineage2.2.1 None
SRR24256337 MDR-TB lineage2.2.1 None
SRR29539602 Pre-XDR-TB lineage2.2.1 None
ERR2517024 MDR-TB lineage3 gb
ERR10762329 MDR-TB lineage2.2.1 None
SRR6807751 MDR-TB lineage2.2.1 None
SRR29017243 MDR-TB lineage3 None
ERR7910903 MDR-TB lineage2.2.1 md
ERR8025655 Pre-XDR-TB lineage2.2.1 None
ERR8025660 Pre-XDR-TB lineage2.2.1 None
SRR10040437 MDR-TB lineage4.5 None
ERR1199127 MDR-TB lineage4.6.1.2 cd
SRR24256155 Pre-XDR-TB lineage2.2.1 None
SRR23310909 MDR-TB lineage2.2.1 None
SRR24256187 Pre-XDR-TB lineage2.2.1 None
ERR2516356 MDR-TB lineage2.2.1 be
SRR16088326 Pre-XDR-TB lineage2.2.1 None
ERR4822296 MDR-TB lineage2.2.1 de
SRR6964574 MDR-TB lineage3 None
ERR11466369 MDR-TB lineage4.1.1.3 None
ERR2517193 MDR-TB lineage2.2.1 nl
ERR11068909 Pre-XDR-TB lineage3 None
SRR23310894 MDR-TB lineage2.2.1 None
SRR5153912 MDR-TB lineage2.2.1 None
ERR4829945 MDR-TB lineage3 pk
ERR2516160 MDR-TB lineage2.2.1 es
ERR9806984 Pre-XDR-TB lineage2.2.1 None
ERR2677470 MDR-TB lineage4.3.4.2 de
SRR24256128 MDR-TB lineage2.2.1 None
DRR454969 MDR-TB lineage2.2.1.1 None
SRR25207235 Pre-XDR-TB lineage2.2.1 None
ERR8025751 Pre-XDR-TB lineage2.2.1 None
SRR14802068 MDR-TB lineage2.2.1 None
SRR24256296 MDR-TB lineage2.2.1 None
SRR14782110 MDR-TB lineage2.2.1 None
SRR6832528 Pre-XDR-TB lineage2.2.1 None
ERR11798587 MDR-TB lineage2.2.1 None
SRR28498401 MDR-TB lineage2.2.1 None
SRR16088549 MDR-TB lineage2.2.1 None
SRR29539436 Pre-XDR-TB lineage2.2.1 None
ERR229931 MDR-TB lineage2.2.1 ru
SRR7755668 Pre-XDR-TB lineage4.2.1 None
ERR4829168 MDR-TB lineage2.2.1 it
ERR7975630 MDR-TB lineage2.2.1 None
SRR23861879 Pre-XDR-TB lineage2.2.1 None
ERR11798589 MDR-TB lineage2.2.1 None
ERR11798586 MDR-TB lineage2.2.1 None
SRR29081013 MDR-TB lineage1.2.1.2.1 None
ERR4828857 Pre-XDR-TB lineage4.1.2.1 None
SRR14801510 MDR-TB lineage2.2.1 None
SRR23340097 MDR-TB lineage2.2.1 None
SRR14807524 MDR-TB lineage2.2.1 None
SRR14801295 MDR-TB lineage2.2.1 None
ERR10762304 Pre-XDR-TB lineage4.2.1 None
SRR16087881 XDR-TB lineage2.2.1 None
SRR18715302 MDR-TB lineage2.2.1 None
SRR6832827 MDR-TB lineage2.2.1 None
SRR28045916 Pre-XDR-TB lineage4.1.1.3 None
ERR7911265 MDR-TB lineage4.2.1 md
SRR28351498 MDR-TB lineage2.2.1 None
ERR11773839 Pre-XDR-TB lineage2.2.1 None
SRR29051335 HR-TB lineage4.3.3 None
SRR29681413 MDR-TB lineage2.2.1 None
ERR067761 Pre-XDR-TB lineage2.2.1 ru
SAMEA2534564 MDR-TB lineage4.2.1 uz
SRR7645888 Pre-XDR-TB lineage2.2.1 None
ERR7911091 MDR-TB lineage2.2.1 md
SRR14782205 MDR-TB lineage2.2.1 None
SRR10380136 MDR-TB lineage2.2.1 None
SRR14801505 Pre-XDR-TB lineage2.2.1 None
SRR14802094 MDR-TB lineage2.2.1 None
SRR24256374 Pre-XDR-TB lineage2.2.1 None
ERR11068012 MDR-TB lineage2.2.1 None
SRR23311062 MDR-TB lineage4.2.1 None
SRR22873610 Pre-XDR-TB lineage2.2.1 None
SRR24256307 MDR-TB lineage2.2.1 None
SRR6832444 Pre-XDR-TB lineage2.2.1 None
SRR18715471 Pre-XDR-TB lineage2.2.1 None
SRR16087895 Pre-XDR-TB lineage2.2.1 None
ERR3794376 MDR-TB lineage2.2.1 None
ERR11043317 MDR-TB lineage4.2.1 None
ERR4829376 Pre-XDR-TB lineage2.2.1 it
SRR23310958 MDR-TB lineage2.2.1 None
SRR13243561 Pre-XDR-TB lineage2.2.1 None
SRR16088542 MDR-TB lineage2.2.1 None
SRR14781957 MDR-TB lineage2.2.1 None
SRR29289268 Pre-XDR-TB lineage3 None
ERR9806983 Pre-XDR-TB lineage2.2.1 None
ERR13285918 MDR-TB lineage2.2.1 None
SRR29681214 MDR-TB lineage2.2.1 None
SRR29539414 MDR-TB lineage2.2.1 None
SRR6484981 HR-TB lineage4.2.1.1 None
SRR18714890 Pre-XDR-TB lineage2.2.1 None
ERR13259969 MDR-TB lineage2.2.1 None
SRR28351374 XDR-TB lineage2.2.1 None
SRR28498708 XDR-TB lineage2.2.1 None
SRR28923833 MDR-TB lineage2.2.2 None
SRR28351623 MDR-TB lineage2.2.1 None
ERR3335723 Pre-XDR-TB lineage3 pk
ERR2707206 MDR-TB lineage4.6.1.2 cd
SRR29539579 MDR-TB lineage2.2.1 None
SRR29681379 MDR-TB lineage2.2.1 None
SRR29539321 XDR-TB lineage2.2.1 None
SRR29539726 MDR-TB lineage2.2.1 None
SRR29539745 MDR-TB lineage2.2.1 None
SRR16088333 Pre-XDR-TB lineage2.2.1 None
SRR24256032 Pre-XDR-TB lineage2.2.1 None
SRR24256294 MDR-TB lineage2.2.1 None
SRR18714870 Pre-XDR-TB lineage2.2.1 None
SRR18715135 MDR-TB lineage2.2.1 None
SRR20632807 Pre-XDR-TB lineage2.2.2 None
ERR11068477 MDR-TB lineage2.2.1 None
ERR11067574 MDR-TB lineage2.2.1 None
SRR23310871 HR-TB lineage2.2.1 None
SRR28351525 MDR-TB lineage2.2.1 None
SRR28498582 MDR-TB lineage2.2.1 None
SRR6832223 MDR-TB lineage2.2.1 None
SRR29538885 MDR-TB lineage2.2.1 None
ERR3794455 MDR-TB lineage2.2.1 None
ERR2600544 MDR-TB lineage2.2.1;lineage4.1;lineage4.3.3 None
SRR25395610 MDR-TB lineage2.2.1 None
ERR4813822 Pre-XDR-TB lineage4.1.2.1;lineage4.3.4 None
ERR10762272 MDR-TB lineage2.2.1 None
SRR23310851 MDR-TB lineage4.2.1 None
SRR23311013 HR-TB lineage4.2.1 None
ERR7911242 MDR-TB lineage2.2.1 md
ERR4872313 Pre-XDR-TB lineage2.2.1 None
SRR29539805 Pre-XDR-TB lineage2.2.1 None
SRR7645804 MDR-TB lineage2.2.1 None
SRR8351921 Pre-XDR-TB lineage2.2.1 None
ERR10762393 MDR-TB lineage2.2.1 None
SRR29539365 Pre-XDR-TB lineage2.2.1 None
ERR4800309 XDR-TB lineage4.2.2.2 in
ERR3287851 MDR-TB lineage4.3.4.2 pe
ERR2600463 MDR-TB lineage2.2.1 None
SRR14801881 Pre-XDR-TB lineage2.2.1 None
ERR2984802 MDR-TB lineage4.3.4.1 None
ERR11068889 MDR-TB lineage2.2.1 None
SRR16149142 Pre-XDR-TB lineage4.2.2.1 None
SRR18715112 MDR-TB lineage2.2.1 None
SRR29539629 MDR-TB lineage2.2.1 None
SRR29681433 MDR-TB lineage2.2.1 None
SRR6832387 MDR-TB lineage2.2.1 None
ERR4872357 MDR-TB lineage2.2.1 None
ERR10762364 MDR-TB lineage2.2.1 None
SRR27107273 Pre-XDR-TB lineage4.3.3 None
ERR13285020 MDR-TB lineage2.2.1 None
SRR29539218 Pre-XDR-TB lineage2.2.1 None
SRR20632779 Pre-XDR-TB lineage2.2.2 None
SRR28858583 MDR-TB lineage2.2.1 None
SRR16088557 Pre-XDR-TB lineage2.2.1 None
SRR28351518 MDR-TB lineage4.2.1;lineage4.8 None
ERR3639789 MDR-TB lineage2.2.1 None
ERR067621 MDR-TB lineage2.2.1 ru
ERR4553760 MDR-TB lineage1.1.3 None
ERR7911220 MDR-TB lineage2.2.1 md
ERR3794477 MDR-TB lineage2.2.1 None
SRR13243567 XDR-TB lineage2.2.1 None
SRR24256257 MDR-TB lineage2.2.1 None