lineage | Count |
---|---|
lineage2.2.2 | 8 |
lineage4.9.1 | 2 |
lineage4.2.2.2 | 33 |
lineage2.2.1 | 6 |
lineage1.1.2 | 2 |
lineage4.6.1.2 | 2 |
1 | |
lineage1.2.1.2 | 2 |
lineage4.5 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
lineage1.2.2.2 | 2 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | SRR1013624 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982529 | MDR-TB | lineage4.9.1 | None | ERR11043936 | MDR-TB | lineage4.2.2.2 | None | ERR4830839 | MDR-TB | lineage4.2.2.2 | et | ERR10680182 | MDR-TB | lineage2.2.1 | None | ERR4011963 | MDR-TB | lineage4.2.2.2 | None | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | ERR4011973 | MDR-TB | lineage4.2.2.2 | None | ERR13276239 | MDR-TB | lineage4.2.2.2 | None | ERR13276180 | MDR-TB | lineage4.2.2.2 | None | ERR5865651 | MDR-TB | lineage2.2.1 | None | ERR7737680 | MDR-TB | lineage4.2.2.2 | None | ERR11044007 | MDR-TB | lineage4.2.2.2 | None | ERR4817772 | MDR-TB | lineage1.1.2 | gb | ERR4828996 | MDR-TB | lineage4.2.2.2 | None | ERR6358769 | MDR-TB | lineage4.6.1.2 | None | ERR4553495 | MDR-TB | None | ERR13276333 | MDR-TB | lineage4.2.2.2 | None | ERR13259966 | MDR-TB | lineage1.2.1.2 | None | SRR7781506 | MDR-TB | lineage4.2.2.2 | None | ERR5865652 | MDR-TB | lineage2.2.1 | None | SRR21576571 | MDR-TB | lineage4.5 | None | ERR9030491 | MDR-TB | lineage1.1.2 | None | ERR4830796 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4810960 | MDR-TB | lineage2.2.1 | cn | SRR6824668 | MDR-TB | lineage2.2.1;lineage4.5 | cn | ERR4831240 | MDR-TB | lineage4.2.2.2 | de | ERR4831239 | MDR-TB | lineage4.2.2.2 | None | SRR21576720 | MDR-TB | lineage1.2.1.2 | None | SRR28393820 | MDR-TB | lineage4.1.2.1;lineage4.4.1.1 | None | SRR29126587 | MDR-TB | lineage4.2.2.2 | None | ERR4797046 | HR-TB | lineage1.2.2.2 | in | ERR4828868 | MDR-TB | lineage4.2.2.2 | None | ERR11042995 | MDR-TB | lineage4.2.2.2 | None | ERR7737795 | MDR-TB | lineage4.9.1 | None | ERR4830809 | Pre-XDR-TB | lineage4.2.2.2 | None | SAMN02360592 | Pre-XDR-TB | lineage2.2.2 | kr | SRR25207361 | MDR-TB | lineage2.2.1 | None | SRR29093272 | MDR-TB | lineage4.2.2.2 | None | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR11044333 | MDR-TB | lineage4.2.2.2 | None | ERR11044613 | MDR-TB | lineage4.2.2.2 | None | SRR29093924 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316019 | MDR-TB | lineage2.2.1 | None | ERR7737856 | MDR-TB | lineage4.2.2.2 | None | SRR29017577 | MDR-TB | lineage1.2.2.2 | None | SRR1049009 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510614 | Pre-XDR-TB | lineage3 | pk | ERR11049567 | MDR-TB | lineage4.2.2.2 | None | SRR1049010 | Pre-XDR-TB | lineage2.2.2 | None | ERR3275847 | MDR-TB | lineage4.2.2.2 | nl | SRR29017122 | MDR-TB | lineage2.2.2 | None | ERR4828989 | MDR-TB | lineage4.2.2.2 | it | SRR21690975 | MDR-TB | lineage4.2.2.2 | None | ERR13245345 | Pre-XDR-TB | lineage2.2.2 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | ERR11044024 | MDR-TB | lineage4.2.2.2 | None | ERR4828871 | MDR-TB | lineage4.2.2.2 | None | SRR1013623 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830782 | MDR-TB | lineage4.2.2.2 | et | ERR6358926 | MDR-TB | lineage4.6.1.2 | None | ERR11082116 | MDR-TB | lineage4.2.2.2 | None |
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