lineage | Count |
---|---|
lineage3 | 105 |
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
lineage3;lineage4.1.1.3 | 1 |
4 | |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
lineage2.2.1.1;lineage3 | 2 |
lineage3;lineage4.3.4.2 | 1 |
lineage1.1.2;lineage3 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage1.1.3;lineage3 | 1 |
spoligotype | Count |
---|---|
None | 119 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814673 | HR-TB | lineage3 | None | ERR4829914 | Sensitive | lineage3 | it | ERR13260054 | MDR-TB | lineage3 | None | ERR13289792 | MDR-TB | lineage3 | None | ERR13265718 | Sensitive | lineage3 | None | ERR4815532 | Other | lineage3 | gb | SRR28044607 | Sensitive | lineage3 | None | SRR28045387 | Sensitive | lineage3 | None | SRR25827726 | Sensitive | lineage3 | None | SRR28045030 | MDR-TB | lineage3 | None | SRR14088357 | Sensitive | lineage3 | None | SRR3105753 | MDR-TB | lineage3 | None | SRR2100404 | Sensitive | lineage3 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6797716 | Sensitive | lineage3 | None | SRR26111985 | Sensitive | lineage3 | None | ERR4798102 | Pre-XDR-TB | lineage3 | in | SRR21728711 | Other | lineage3 | None | ERR13261962 | Pre-XDR-TB | lineage3;lineage4.1.1.3 | None | SRR29230980 | Other | lineage3 | None | ERR4815392 | Sensitive | lineage3 | gb | SRR29052993 | Other | lineage3 | None | ERR4553847 | MDR-TB | None | SRR3105759 | Pre-XDR-TB | lineage3 | None | SRR6153253 | HR-TB | lineage3 | ca | SRR6797336 | HR-TB | lineage3 | None | SRR6650219 | Sensitive | lineage3 | None | SRR6797793 | Sensitive | lineage3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4797246 | Pre-XDR-TB | lineage3 | in | ERR13289727 | Other | lineage3 | None | SRR29053094 | Sensitive | lineage3 | None | SRR29017185 | MDR-TB | lineage3 | None | ERR4800117 | Pre-XDR-TB | lineage3 | None | ERR2510356 | HR-TB | lineage3 | pk | ERR13265243 | Other | lineage3 | None | SRR28868570 | Sensitive | lineage3 | None | SRR25827810 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR5341290 | Sensitive | lineage3 | in | SRR22251485 | Sensitive | lineage3 | None | SRR21732464 | Sensitive | lineage3 | None | ERR13265126 | Sensitive | lineage3 | None | SRR21733047 | HR-TB | lineage3 | None | ERR13265328 | Sensitive | lineage3 | None | ERR2512680 | Sensitive | lineage3 | gb | SRR29231432 | Sensitive | lineage3 | None | SRR21732565 | Sensitive | lineage3 | None | SRR29017084 | MDR-TB | lineage3 | None | SRR28409318 | Other | lineage3 | None | SRR28044614 | Sensitive | lineage3 | None | ERR4553403 | MDR-TB | None | ERR4553445 | MDR-TB | None | SRR28045937 | Pre-XDR-TB | lineage3 | None | ERR987722 | MDR-TB | None | SRR28026760 | Sensitive | lineage3 | None | ERR2510504 | XDR-TB | lineage3 | pk | ERR4799248 | Other | lineage3 | in | SRR5341381 | Sensitive | lineage3 | None | SRR22249695 | Sensitive | lineage3 | None | SRR27450020 | Sensitive | lineage3 | None | SRR28044991 | Other | lineage3 | None | ERR4797270 | Sensitive | lineage3 | in | SRR22251197 | Other | lineage3 | None | SRR6797782 | Sensitive | lineage3 | None | SRR6046762 | Other | lineage3 | gb | SRR22251868 | Sensitive | lineage3 | None | SRR25827847 | Pre-XDR-TB | lineage3 | None | SRR15465765 | Sensitive | lineage3 | None | DRR473753 | Sensitive | lineage3 | None | ERR11081892 | Sensitive | lineage3 | None | SRR6045915 | Other | lineage3 | gb | SRR29289247 | XDR-TB | lineage3 | None | ERR13266812 | Sensitive | lineage3 | None | SRR6797717 | Sensitive | lineage3 | None | ERR13261960 | Sensitive | lineage3;lineage4.3.4.2 | None | SRR29017390 | MDR-TB | lineage3 | None | ERR4796856 | Sensitive | lineage3 | in | SRR21676525 | Other | lineage3 | None | SRR21662746 | Sensitive | lineage3 | None | ERR13265255 | Sensitive | lineage3 | None | ERR4817718 | Sensitive | lineage3 | gb | SRR6044856 | MDR-TB | lineage3 | gb | SRR6797468 | Sensitive | lineage3 | None | SRR21728326 | Other | lineage3 | None | SRR28351546 | Sensitive | lineage3 | None | ERR13289662 | Other | lineage3 | None | SRR6964552 | HR-TB | lineage3 | None | ERR4831048 | Sensitive | lineage3 | np | SRR3103071 | Pre-XDR-TB | lineage1.1.2;lineage3 | None | ERR4798042 | Sensitive | lineage3 | in | SRR26112524 | Sensitive | lineage3 | None | SRR6045523 | MDR-TB | lineage3 | gb | ERR11050501 | Sensitive | lineage3 | None | SRR26112395 | Other | lineage3 | None | SRR25827814 | Sensitive | lineage3 | None | SRR28351347 | Other | lineage3 | None | ERR4817472 | HR-TB | lineage3 | gb | SRR27450433 | Sensitive | lineage3 | None | ERR2510472 | MDR-TB | lineage3 | pk | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR25827343 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR4818255 | HR-TB | lineage3 | None | SRR29096122 | Sensitive | lineage3 | None | SRR6797702 | Sensitive | lineage3 | None | ERR4800401 | Sensitive | lineage3 | in | SRR3105764 | Pre-XDR-TB | lineage3 | None | ERR11068196 | Sensitive | lineage3 | None | SRR6797686 | Sensitive | lineage3 | None | ERR12544142 | Sensitive | lineage3 | None | ERR4814582 | HR-TB | lineage3 | None | ERR13289559 | MDR-TB | lineage3 | None | SRR30182517 | Sensitive | lineage3 | None | SRR29289192 | Pre-XDR-TB | lineage3 | None | ERR4799501 | Sensitive | lineage3 | in | SRR25827712 | MDR-TB | lineage1.1.3;lineage3 | None | SRR28044434 | MDR-TB | lineage3 | None | ERR13262111 | Sensitive | lineage3 | None | SRR25827419 | Pre-XDR-TB | lineage3 | None |
---|