Rv3795 - c.916_918delATGinsGA
Drug resistance types
1 Sensitive
0 RR-TB
0 HR-TB
22 MDR-TB
19 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage2.2.1 | 24 |
| lineage4.1.2.1 | 1 |
| lineage2.2.2;lineage4.1.1.3 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage4.1.1.3;lineage4.8 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage2.2.2;lineage4.4.1.1 | 1 |
| lineage2.2.1.2;lineage4.1.1.3 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.1;lineage4.3.3 | 2 |
| lineage3;lineage4.3.4.2 | 1 |
| lineage4.3.4.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827428 | MDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR3794362 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR10680190 | MDR-TB | lineage2.2.1 | None | ERR3287880 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR13289008 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | None | SRR1181072 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827875 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3 | None | SRR1173861 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | ERR552979 | MDR-TB | lineage4.3.4.2 | None | SRR998825 | MDR-TB | lineage4.6.2.2;lineage6.3.1 | None | ERR552586_ERR552585 | MDR-TB | lineage2.2.1 | None | SRR25389520 | Pre-XDR-TB | lineage2.2.1 | None | ERR11489046 | MDR-TB | lineage2.2.1 | None | ERR10748138 | Pre-XDR-TB | lineage2.2.2;lineage4.4.1.1 | None | ERR4797994 | Pre-XDR-TB | lineage2.2.1.2;lineage4.1.1.3 | in | SRR671854 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10680083 | MDR-TB | lineage4.1 | None | SRR7645874 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR108494 | MDR-TB | lineage2.2.1 | ru | SRR10185953 | MDR-TB | lineage2.2.1 | None | SRR12420320 | Sensitive | lineage2.2.1.1 | None | ERR1035013 | Pre-XDR-TB | lineage2.2.1 | za | SRR1173518 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | ERR9806942 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420769 | MDR-TB | lineage2.2.1 | None | ERR3794512 | MDR-TB | lineage2.2.1 | None | SRR1181097 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665743 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307372 | MDR-TB | lineage2.2.1 | None | ERR552951_ERR552950 | MDR-TB | lineage2.2.1 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069466 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706378 | MDR-TB | lineage2.2.1 | None | SRR29539538 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173789 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR25827381 | Pre-XDR-TB | lineage3;lineage4.3.4.2 | None | ERR4020182 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1 | None | SRR25207110 | XDR-TB | lineage2.2.1 | None | SRR25389521 | Pre-XDR-TB | lineage2.2.1 | None | ERR552586 | MDR-TB | lineage2.2.1 | None | SRR1173724 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | ERR9992901 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SAMEA2534749 | MDR-TB | lineage2.2.1 | uz | ERR3077954 | MDR-TB | lineage4.2.2.2 | None |
|---|
