lineage | Count |
---|---|
lineage4.1.2.1 | 3 |
lineage3.1.2 | 1 |
lineage2.2.1 | 27 |
lineage2.2.1.1 | 9 |
lineage1.1.2 | 3 |
lineage4.3.4.2 | 6 |
lineage4.2.1 | 1 |
lineage1.2.1.2.1 | 2 |
lineage4.8 | 5 |
lineage4.4.1.1 | 4 |
lineage3 | 7 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2.2.2 | 3 |
lineage4.6.2.2 | 1 |
lineage4.3 | 1 |
lineage4.4.2 | 1 |
lineage3.1.2.1 | 1 |
lineage4.3.3 | 2 |
lineage4.1.4 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR751527 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4798323 | MDR-TB | lineage3.1.2 | in | ERR1035013 | Pre-XDR-TB | lineage2.2.1 | za | ERR2200138 | Pre-XDR-TB | lineage2.2.1 | de | ERR4832028 | MDR-TB | lineage2.2.1.1 | vn | ERR2199837 | Pre-XDR-TB | lineage2.2.1 | de | ERR7911121 | MDR-TB | lineage2.2.1.1 | vn | ERR2510316 | MDR-TB | lineage1.1.2 | pk | ERR4813386 | MDR-TB | lineage4.3.4.2 | pe | ERR4800474 | Pre-XDR-TB | lineage1.1.2 | in | ERR4829394 | MDR-TB | lineage4.2.1 | None | ERR1213910 | MDR-TB | lineage1.2.1.2.1 | ph | ERR2513690 | Other | lineage4.8 | gb | ERR2200092 | RR-TB | lineage4.4.1.1 | rs | ERR2510530 | Pre-XDR-TB | lineage3 | pk | ERR4831598 | MDR-TB | lineage2.2.1.1 | vn | SAMEA2534411 | MDR-TB | lineage2.2.1 | uz | SRR6824453 | MDR-TB | lineage2.2.1 | cn | ERR4810484 | MDR-TB | lineage2.2.1 | cn | ERR2516532 | MDR-TB | lineage4.1.1 | pe | ERR3287666 | MDR-TB | lineage4.3.4.2 | pe | SAMN03246463 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4822323 | Pre-XDR-TB | lineage2.2.1 | de | SAMN02584594 | MDR-TB | lineage2.2.1 | md | ERR1034717 | MDR-TB | lineage2.2.1 | pe | ERR1023395 | HR-TB | lineage2.2.1 | None | ERR1034738 | MDR-TB | lineage2.2.1 | pe | ERR2433011 | MDR-TB | lineage4.3.4.2.1 | None | ERR551232 | HR-TB | lineage2.2.1 | de | SRR1723848 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510517 | Pre-XDR-TB | lineage3 | pk | SRR6397957 | MDR-TB | lineage1.2.1.2.1 | ca | SRR6824636 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287619 | MDR-TB | lineage4.3.4.2 | pe | SRR5709967 | MDR-TB | lineage2.2.1 | None | SAMN02398708 | Pre-XDR-TB | lineage2.2.2 | kr | ERR3287835 | MDR-TB | lineage4.3.4.2 | pe | SAMN02584593 | MDR-TB | lineage2.2.1 | md | ERR1679633 | MDR-TB | lineage4.6.2.2 | None | SRR5073998 | MDR-TB | lineage2.2.1.1 | vn | ERR1193766 | HR-TB | lineage4.3 | np | ERR464730 | MDR-TB | lineage4.4.1.1 | ch | SRR8651637 | Pre-XDR-TB | lineage4.4.2 | cn | ERR7911183 | MDR-TB | lineage2.2.1.1 | vn | ERR2677445 | Pre-XDR-TB | lineage2.2.1 | de | ERR1034597 | Pre-XDR-TB | lineage3.1.2.1 | pk | ERR779880 | MDR-TB | lineage4.3.4.2 | pe | ERR2510453 | Pre-XDR-TB | lineage4.8 | pk | ERR4831599 | MDR-TB | lineage2.2.1.1 | vn | ERR2516980 | MDR-TB | lineage4.8 | gb | ERR464729 | MDR-TB | lineage4.4.1.1 | ch | ERR4810947 | Pre-XDR-TB | lineage2.2.1 | cn | ERR553314 | HR-TB | lineage4.8 | None | ERR2510650 | MDR-TB | lineage3 | pk | ERR3287478 | HR-TB | lineage4.3.4.2 | pe | ERR1555057 | MDR-TB | lineage4.3.3 | None | SRR6824523 | RR-TB | lineage2.2.1 | cn | ERR3335762 | MDR-TB | lineage3 | pk | ERR2184397 | MDR-TB | lineage2.2.1 | pe | SAMN02419662 | Pre-XDR-TB | lineage2.2.1 | by | ERR1768638 | Pre-XDR-TB | lineage2.2.1 | de | SAMN02414948 | MDR-TB | lineage4.1.4 | se | SRR23339962 | HR-TB | lineage4.8 | None | ERR1768629 | Pre-XDR-TB | lineage2.2.1 | de | ERR2041745 | RR-TB | lineage4.4.1.1 | rs | ERR7911503 | MDR-TB | lineage2.2.1.1 | vn | ERR2510506 | MDR-TB | lineage3 | pk | ERR4800473 | Pre-XDR-TB | lineage3 | in | SRR671855 | Pre-XDR-TB | lineage2.2.2 | cn | ERR2510469 | Pre-XDR-TB | lineage3 | pk | ERR5917703 | MDR-TB | lineage2.2.1 | by | ERR1213892 | Other | lineage4.3.3 | pe | ERR2510593 | HR-TB | lineage1.1.2 | None | ERR3276064 | Pre-XDR-TB | lineage4.1.2.1 | nl | ERR2199818 | Pre-XDR-TB | lineage2.2.1 | de | SAMN02360604 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4831725 | MDR-TB | lineage2.2.1.1 | None | ERR4831720 | MDR-TB | lineage2.2.1.1 | vn | ERR3287589 | MDR-TB | lineage2.2.1 | pe | ERR751383 | Pre-XDR-TB | lineage4.1.2.1 | pe |
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