lineage | Count |
---|---|
lineage2.2.1 | 19 |
lineage4.3.4.1 | 7 |
lineage1.2.2.2 | 3 |
lineage4.3.3 | 3 |
lineage1.1.2 | 5 |
lineage4.8 | 5 |
lineage4.3.2;lineage4.3.3 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.1 | 4 |
lineage4.3.2.1 | 2 |
lineage4.3.4.2 | 3 |
lineage4.3 | 1 |
lineage4.1.2.1 | 3 |
lineage4.1.1.3 | 2 |
lineage4.3.2 | 1 |
lineage4.3.4.1;lineage4.9 | 1 |
lineage4.4.2 | 2 |
lineage1.2.1.2.1 | 2 |
lineage2.1 | 1 |
lineage1.1.2;lineage3.1.2 | 1 |
lineage1.1.1.1;lineage2.2.1 | 1 |
lineage1.1.3.3 | 1 |
spoligotype | Count |
---|---|
None | 69 |
ID | Drug resistance | Lineage | Country iso2 | SRR6896231 | MDR-TB | lineage2.2.1 | None | SAMEA5569971 | MDR-TB | lineage4.3.4.1 | None | SRR10185950 | MDR-TB | lineage1.2.2.2 | None | SRR16370498 | MDR-TB | lineage4.3.3 | None | SRR28393275 | MDR-TB | lineage4.3.4.1 | None | SRR28393536 | MDR-TB | lineage4.3.3 | None | SRR29772728 | MDR-TB | lineage1.1.2 | None | SRR29017254 | MDR-TB | lineage4.8 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866686 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | SRR29772631 | HR-TB | lineage1.1.2 | None | SRR28393257 | MDR-TB | lineage4.3.4.1 | None | ERR7910853 | MDR-TB | lineage4.3.4.1 | pe | ERR440680 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4828859 | MDR-TB | lineage4.3.1 | None | ERR552774 | MDR-TB | lineage2.2.1 | uz | SRR6207277 | MDR-TB | lineage2.2.1 | None | SRR7781502 | MDR-TB | lineage4.3.1 | None | SRR12420761 | MDR-TB | lineage2.2.1 | None | ERR5866284 | Pre-XDR-TB | lineage4.8 | None | ERR10610137 | MDR-TB | lineage4.3.2.1 | None | ERR3077941 | Pre-XDR-TB | lineage2.2.1 | None | SRR3725721 | Sensitive | lineage2.2.1 | None | SRR22873594 | MDR-TB | lineage2.2.1 | None | ERR4813314 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4553474 | MDR-TB | lineage4.3 | None | ERR4830781 | Pre-XDR-TB | lineage4.1.2.1 | et | ERR11488473 | MDR-TB | lineage4.1.1.3 | None | SRR29017610 | MDR-TB | lineage4.3.2 | None | ERR3287777 | MDR-TB | lineage4.3.4.1;lineage4.9 | None | SRR29440785 | MDR-TB | lineage2.2.1 | None | SRR29772762 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714958 | Sensitive | lineage2.2.1 | None | SRR671725 | MDR-TB | lineage4.4.2 | cn | SRR15014704 | MDR-TB | lineage1.1.2 | None | ERR10680005 | RR-TB | lineage4.8 | None | ERR9029846 | MDR-TB | lineage4.3.4.1 | None | ERR9125454 | MDR-TB | lineage1.2.1.2.1 | None | ERR2653080 | MDR-TB | lineage4.3.4.1 | None | ERR5866285 | Pre-XDR-TB | lineage4.8 | None | SRR25534525 | Sensitive | lineage2.2.1 | None | ERR5866286 | Pre-XDR-TB | lineage4.8 | None | ERR4830815 | Pre-XDR-TB | lineage4.1.2.1 | et | ERR7910862 | MDR-TB | lineage4.3.3 | pe | SRR3724957 | HR-TB | lineage1.1.2 | None | SRR26937040 | MDR-TB | lineage2.1 | None | ERR4828919 | MDR-TB | lineage4.3.1 | None | SRR11972335 | MDR-TB | lineage2.2.1 | None | SRR5341361 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR16058724 | MDR-TB | lineage1.2.1.2.1 | None | SRR25827695 | MDR-TB | lineage1.1.2;lineage3.1.2 | None | ERR11488455 | MDR-TB | lineage4.1.1.3 | None | ERR2145512 | MDR-TB | lineage4.1.2.1 | None | SRR6832504 | MDR-TB | lineage2.2.1 | None | SRR1710096 | MDR-TB | lineage2.2.1 | cn | SRR5341359 | Pre-XDR-TB | lineage1.1.2 | in | SRR29016949 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR671861 | MDR-TB | lineage4.4.2 | cn | SRR6896449 | MDR-TB | lineage2.2.1 | None | ERR6866283 | MDR-TB | lineage4.3.4.2 | None | SRR26937050 | HR-TB | lineage1.1.1.1;lineage2.2.1 | None | ERR2515209 | MDR-TB | lineage2.2.1 | za | ERR2510700 | Pre-XDR-TB | lineage1.1.3.3 | pk | SRR2101460 | MDR-TB | lineage2.2.1 | None | ERR751545 | MDR-TB | lineage4.3.4.2 | pe | ERR4828860 | MDR-TB | lineage4.3.1 | None | SRR5341409 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9806626 | MDR-TB | lineage4.3.2.1 | None | SRR5894881 | MDR-TB | lineage2.2.1 | None |
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