lineage | Count |
---|---|
lineage2.2.1 | 24 |
lineage1.2.2.2 | 3 |
lineage1.1.1 | 3 |
lineage2.2.2 | 2 |
lineage4.8 | 9 |
lineage1.2.1.2.1 | 4 |
lineage2.2.1.2 | 1 |
lineage4.7 | 1 |
lineage1.1.3.1 | 1 |
lineage4.6.1.2 | 1 |
lineage4.3.3 | 1 |
lineage4.1.1.1 | 1 |
lineage4.9 | 2 |
lineage2.2.1.1 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | SRR25514993 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389423 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389430 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351491 | MDR-TB | lineage1.2.2.2 | None | SRR11662431 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517233 | Other | lineage1.1.1 | nl | SRR25389422 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069381 | Pre-XDR-TB | lineage2.2.2 | None | ERR11067504 | MDR-TB | lineage4.8 | None | ERR7975683 | Pre-XDR-TB | lineage2.2.1 | None | SRR22757402 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806872 | Pre-XDR-TB | lineage4.8 | None | SRR5709756 | Pre-XDR-TB | lineage2.2.1 | th | ERR3014580 | MDR-TB | lineage4.8 | tn | ERR13260025 | MDR-TB | lineage1.2.1.2.1 | None | SRR24256001 | MDR-TB | lineage2.2.1 | None | ERR017789 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR786667 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119639 | MDR-TB | lineage4.8 | None | SRR30180310 | MDR-TB | lineage1.2.1.2.1 | None | SRR18715460 | MDR-TB | lineage2.2.1 | None | ERR13276122 | MDR-TB | lineage1.2.1.2.1 | None | ERR13290701 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044807 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274012 | MDR-TB | lineage4.7 | None | ERR11488564 | MDR-TB | lineage1.1.3.1 | None | ERR2707016 | MDR-TB | lineage4.6.1.2 | cd | SRR21277426 | Other | lineage2.2.1 | None | ERR2446491 | Other | lineage1.1.1 | nl | SRR29096363 | Pre-XDR-TB | lineage4.8 | None | ERR4829928 | HR-TB | lineage4.3.3 | it | ERR11080929 | MDR-TB | lineage4.8 | None | ERR4820207 | Other | lineage1.2.2.2 | gb | ERR3275325 | Other | lineage1.1.1 | nl | ERR11773820 | MDR-TB | lineage2.2.1 | None | ERR11488785 | MDR-TB | lineage4.1.1.1 | None | SRR25534415 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284780 | MDR-TB | lineage4.8 | None | SRR25389429 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389424 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872247 | MDR-TB | lineage4.8 | None | ERR4827905 | MDR-TB | lineage2.2.1 | None | SRR21001885 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001884 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231545 | MDR-TB | lineage4.9 | None | SRR29385410 | Pre-XDR-TB | lineage2.2.2 | None | ERR3273211 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4012004 | Pre-XDR-TB | lineage4.8 | None | ERR2706913 | MDR-TB | lineage4.9 | cd | SRR3105742 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR29096917 | RR-TB | lineage2.2.1 | None | SRR29772474 | MDR-TB | lineage1.1.2 | None | SRR29772509 | MDR-TB | lineage1.2.2.2 | None | SRR30182413 | HR-TB | lineage1.2.1.2.1 | None | SRR29681386 | MDR-TB | lineage2.2.1 | None | SRR25515153 | MDR-TB | lineage2.2.1 | None |
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