lineage | Count |
---|---|
lineage2.2.1 | 9 |
lineage1.1.1 | 3 |
lineage4.8 | 7 |
lineage3;lineage2.2.1 | 2 |
lineage1 | 1 |
lineage4.9 | 1 |
lineage1.2.2.2 | 1 |
lineage4.6.1.2 | 1 |
lineage4.3.3 | 1 |
lineage2.2.1.2 | 2 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 29 |
ID | Drug resistance | Lineage | Country iso2 | SRR21001884 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275325 | Other | lineage1.1.1 | nl | SRR21001885 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080929 | MDR-TB | lineage4.8 | None | ERR9806872 | Pre-XDR-TB | lineage4.8 | None | SRR3105742 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR21277426 | Other | lineage2.2.1 | None | SRR22757402 | Pre-XDR-TB | lineage2.2.1 | None | SRR3105800 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR2446491 | Other | lineage1.1.1 | nl | ERR4827905 | MDR-TB | lineage2.2.1 | None | ERR4819785 | Other | lineage1 | None | ERR2517233 | Other | lineage1.1.1 | nl | ERR2706913 | MDR-TB | lineage4.9 | cd | ERR4820207 | Other | lineage1.2.2.2 | gb | ERR2707016 | MDR-TB | lineage4.6.1.2 | cd | SRR5709756 | Pre-XDR-TB | lineage2.2.1 | th | ERR11067504 | MDR-TB | lineage4.8 | None | SRR786667 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829928 | HR-TB | lineage4.3.3 | it | ERR4872247 | MDR-TB | lineage4.8 | None | ERR3014580 | MDR-TB | lineage4.8 | tn | ERR017789 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3273211 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR019863 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR7975683 | Pre-XDR-TB | lineage2.2.1 | None | ERR4012004 | Pre-XDR-TB | lineage4.8 | None | ERR9119639 | MDR-TB | lineage4.8 | None | SRR18715460 | MDR-TB | lineage2.2.1 | None |
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