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SRA data
Rv3806c
- c.-100C>T
Drug resistance types
5 Sensitive
0 RR-TB
0 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.1.1
4
lineage4.8
2
lineage3
2
lineage4.3.4.2
2
lineage6.3.3
1
lineage4.1.1.3
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
12
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR2041801
MDR-TB
lineage4.8
None
ERR2510515
Pre-XDR-TB
lineage3
None
ERR2510610
Pre-XDR-TB
lineage4.1.1.3
pk
ERR2679278
Sensitive
lineage6.3.3
None
ERR2706974
MDR-TB
lineage4.3.4.2
cd
ERR4815073
Sensitive
lineage4.1.1.1
gb
ERR4817878
Sensitive
lineage4.1.1.1
None
ERR4821200
Sensitive
lineage4.1.1.1
gb
ERR4821670
Sensitive
lineage4.1.1.1
gb
SRR29231835
MDR-TB
lineage4.3.4.2
None
Showing 1 to 10 of 12 entries
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