lineage | Count |
---|---|
lineage4.8 | 9 |
lineage2.2.1 | 5 |
lineage4.1.2.1 | 18 |
lineage4.6.2.2 | 2 |
lineage4.6.1.2 | 3 |
lineage4.1 | 3 |
lineage4.1.3 | 1 |
lineage4.3.2;lineage4.3.3 | 1 |
lineage4.1.1.1 | 8 |
lineage4.3.4.2 | 1 |
2 | |
lineage4.1.1.3 | 1 |
lineage2.2.1.1 | 2 |
lineage4.3.4.2.1 | 3 |
lineage4.3.3 | 3 |
lineage3 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 | SRR1163046 | Pre-XDR-TB | lineage4.8 | None | ERR502941 | MDR-TB | lineage2.2.1 | None | ERR9029853 | HR-TB | lineage4.1.2.1 | None | ERR4872236 | RR-TB | lineage4.6.2.2 | None | ERR13290361 | Pre-XDR-TB | lineage4.8 | None | SRR28393784 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28393607 | MDR-TB | lineage4.1.2.1 | None | ERR4813926 | MDR-TB | lineage4.1.2.1 | br | ERR2516920 | MDR-TB | lineage4.1.2.1 | gb | ERR13290359 | Pre-XDR-TB | lineage4.8 | None | ERR10680015 | RR-TB | lineage4.1.2.1 | None | SRR1723783 | RR-TB | lineage2.2.1 | None | SAMN02380998 | MDR-TB | lineage4.6.1.2 | ug | DRR249160 | MDR-TB | lineage2.2.1 | None | SRR1144769 | Pre-XDR-TB | lineage4.8 | None | SRR7592384 | Pre-XDR-TB | lineage4.8 | None | ERR551068 | HR-TB | lineage4.1 | None | SRR1140717 | MDR-TB | lineage4.6.1.2 | None | SRR19276618 | MDR-TB | lineage4.1.2.1 | None | ERR13261891 | MDR-TB | lineage4.1.2.1 | None | SRR28393999 | MDR-TB | lineage4.1.2.1 | None | SRR6824406 | MDR-TB | lineage2.2.1 | cn | ERR10680018 | MDR-TB | lineage4.1.3 | None | SRR28393586 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | SRR29017080 | MDR-TB | lineage4.1.1.1 | None | ERR3132235 | HR-TB | lineage4.1.1.1 | None | SRR28393492 | MDR-TB | lineage4.3.4.2 | None | SAMEA5569801 | HR-TB | lineage4.1.2.1 | None | SRR1146347 | Pre-XDR-TB | lineage4.8 | None | SRR29016874 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR10680028 | RR-TB | lineage4.1.2.1 | None | ERR9119628 | RR-TB | lineage4.6.2.2 | None | ERR4553618 | MDR-TB | None | SRR1162958 | Pre-XDR-TB | lineage4.8 | None | ERR1035191 | Pre-XDR-TB | lineage4.8 | pt | ERR11551981 | MDR-TB | lineage4.1.2.1 | None | ERR4800101 | MDR-TB | lineage4.1.1.1 | None | ERR2515594 | MDR-TB | lineage4.1.1.3 | za | ERR10680219 | RR-TB | lineage4.1.2.1 | None | SRR15316550 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4553848 | MDR-TB | lineage4.1.1.1 | None | SRR28393640 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29093881 | MDR-TB | lineage4.3.4.2.1 | None | SRR8237316 | MDR-TB | lineage2.2.1 | np | ERR3287608 | HR-TB | lineage4.1.2.1 | None | SRR21277572 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1062888 | MDR-TB | lineage4.6.1.2 | None | SRR29017617 | MDR-TB | lineage4.1.1.1 | None | SRR28393563 | MDR-TB | lineage4.3.3 | None | ERR275181 | Pre-XDR-TB | lineage4.8 | pt | SRR28393434 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4553513 | MDR-TB | None | ERR2653231 | MDR-TB | lineage4.1.1.1 | None | ERR10748519 | MDR-TB | lineage4.1.1.1 | None | ERR13261627 | MDR-TB | lineage4.1.2.1 | None | SRR29096564 | MDR-TB | lineage4.3.4.2.1 | None | ERR4553609 | RR-TB | lineage3 | None | SRR29772736 | Pre-XDR-TB | lineage4.3 | None | SRR29017547 | MDR-TB | lineage4.1.2.1 | None | ERR551069_ERR551067_ERR551068 | HR-TB | lineage4.1 | None | ERR3287467 | Pre-XDR-TB | lineage4.3.3 | pe | SRR27107240 | MDR-TB | lineage4.3.3 | None | SAMEA2533673 | HR-TB | lineage4.1 | None | ERR11488749 | MDR-TB | lineage4.3.4.2.1 | None |
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