Rv3806c - p.Trp175Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
1 HR-TB
126 MDR-TB
24 Pre-XDR-TB
4 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 48 |
| lineage4.6.1.2 | 8 |
| lineage3 | 7 |
| lineage2.2.1 | 34 |
| lineage4.8 | 13 |
| lineage4.1.2.1 | 17 |
| lineage4 | 6 |
| lineage4.3.4.2.1 | 4 |
| lineage4.2.1 | 8 |
| lineage4.1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.2.2.2 | 1 |
| 1 | |
| lineage1.2.2.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2.1;lineage4 | 3 |
| lineage5.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5535913 | MDR-TB | lineage3.1.1 | None | ERR6358912 | MDR-TB | lineage4.6.1.2 | None | ERR4423684 | MDR-TB | lineage3.1.1 | None | ERR13261156 | Pre-XDR-TB | lineage3 | None | SRR29056147 | MDR-TB | lineage2.2.1 | None | ERR2510522 | MDR-TB | lineage3 | pk | ERR2510365 | Pre-XDR-TB | lineage3 | pk | ERR2510568 | Pre-XDR-TB | lineage3 | pk | SRR29273717 | MDR-TB | lineage4.8 | None | ERR4423687 | HR-TB | lineage3.1.1 | None | SRR29273611 | MDR-TB | lineage4.8 | None | ERR4798805 | Pre-XDR-TB | lineage4.8 | in | SRR29055674 | MDR-TB | lineage2.2.1 | None | ERR4423767 | MDR-TB | lineage3.1.1 | None | ERR4423657 | MDR-TB | lineage3.1.1 | None | ERR4830996 | Pre-XDR-TB | lineage2.2.1 | np | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199120 | MDR-TB | lineage4.6.1.2 | cd | ERR5865901 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423654 | Other | lineage3.1.1 | None | ERR4423688 | Other | lineage3.1.1 | None | ERR4423698 | RR-TB | lineage3.1.1 | None | ERR5865147 | MDR-TB | lineage2.2.1 | None | ERR5865900 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153214 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865146 | MDR-TB | lineage2.2.1 | None | SRR5535917 | MDR-TB | lineage3.1.1 | None | ERR9027244 | MDR-TB | lineage4.1.2.1 | None | ERR4553747 | MDR-TB | lineage4 | None | SRR13180299 | MDR-TB | lineage4.1.2.1 | None | ERR4423673 | MDR-TB | lineage3.1.1 | None | ERR4423694 | MDR-TB | lineage3.1.1 | None | ERR11488911 | MDR-TB | lineage4.3.4.2.1 | None | SRR5535922 | MDR-TB | lineage3.1.1 | None | SRR29274061 | MDR-TB | lineage4.1.2.1 | None | SRR29055694 | MDR-TB | lineage2.2.1 | None | SRR29273849 | MDR-TB | lineage4.8 | None | SRR22536494 | MDR-TB | lineage4.1.2.1 | None | SRR29017242 | Pre-XDR-TB | lineage4 | None | ERR4423667 | Other | lineage3.1.1 | None | SRR5535892 | MDR-TB | lineage3.1.1 | None | SRR1166153 | MDR-TB | lineage4.2.1 | None | ERR9030410 | MDR-TB | lineage4.1.3 | None | SRR29681219 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055635 | MDR-TB | lineage2.2.1 | None | SRR5535915 | MDR-TB | lineage3.1.1 | None | ERR4423685 | MDR-TB | lineage3.1.1 | None | ERR13261941 | Pre-XDR-TB | lineage4.3.3 | None | ERR4423533 | MDR-TB | lineage3.1.1 | None | SRR5535910 | MDR-TB | lineage3.1.1 | None | ERR3132255 | MDR-TB | lineage4.6.1.2 | None | ERR4423768 | MDR-TB | lineage3.1.1 | None | SRR5535920 | MDR-TB | lineage3.1.1 | None | ERR4423762 | MDR-TB | lineage3.1.1 | None | SRR5535909 | MDR-TB | lineage3.1.1 | None | SRR11662540 | MDR-TB | lineage2.2.1 | None | ERR4423660 | MDR-TB | lineage3.1.1 | None | SRR29017622 | Pre-XDR-TB | lineage4 | None | ERR2510450 | MDR-TB | lineage3 | pk | SRR5535914 | MDR-TB | lineage3.1.1 | None | SRR5535916 | MDR-TB | lineage3.1.1 | None | SRR1169004 | MDR-TB | lineage4.2.1 | None | ERR3148184 | MDR-TB | lineage4.3.4.2 | mx | SRR28044347 | XDR-TB | lineage3 | None | SRR5535911 | MDR-TB | lineage3.1.1 | None | SAMN02584585 | MDR-TB | lineage4.2.1 | md | SRR18715197 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743402 | Pre-XDR-TB | lineage4.2.1 | None | ERR4822304 | MDR-TB | lineage4.1.2.1 | de | ERR4829956 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7737820 | MDR-TB | lineage4.2.2.2 | None | SRR5535918 | MDR-TB | lineage3.1.1 | None | SRR14802131 | MDR-TB | lineage2.2.1 | None | SRR23311030 | MDR-TB | lineage4.2.1 | None | SRR5535931 | MDR-TB | lineage3.1.1 | None | SRR29274736 | MDR-TB | lineage2.2.1 | None | ERR1654688 | MDR-TB | lineage4.6.1.2 | None | SRR18665471 | MDR-TB | lineage4.1.2.1 | None | ERR4553640 | MDR-TB | None | ERR5865726 | MDR-TB | lineage2.2.1 | None | ERR5865725 | MDR-TB | lineage2.2.1 | None | ERR11488995 | MDR-TB | lineage4.3.4.2.1 | None | SRR29017102 | MDR-TB | lineage1.2.2.2 | None | ERR4423700 | MDR-TB | lineage3.1.1 | None | ERR13267042 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4423703 | MDR-TB | lineage3.1.1 | None | ERR5865149 | MDR-TB | lineage2.2.1 | None | SRR29231678 | MDR-TB | lineage4.1.2 | None | SRR29231819 | MDR-TB | lineage4.6.1.2 | None | SRR29273929 | MDR-TB | lineage4.8 | None | ERR4423699 | MDR-TB | lineage3.1.1 | None | SRR29274056 | MDR-TB | lineage4.1.2.1 | None | ERR4800692 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289477 | MDR-TB | lineage2.2.1 | None | ERR4423686 | MDR-TB | lineage3.1.1 | None | ERR4423656 | MDR-TB | lineage3.1.1 | None | SRR5535908 | MDR-TB | lineage3.1.1 | None | ERR5865902 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362045 | MDR-TB | lineage4.6.1.2 | None | SRR10040496 | MDR-TB | lineage2.2.1 | None | SRR5535912 | MDR-TB | lineage3.1.1 | None | SRR7517833 | Pre-XDR-TB | lineage4.3.3 | None | ERR13261571 | MDR-TB | lineage4.3.4 | None | ERR4872340 | MDR-TB | lineage4.2.1 | None | SRR20632775 | MDR-TB | lineage2.2.1 | None | ERR4553841 | MDR-TB | lineage4 | None | ERR4827460 | MDR-TB | lineage2.2.1 | None | ERR13284782 | MDR-TB | lineage4.8 | None | SRR22528546 | MDR-TB | lineage4.1.2.1 | None | SRR29273928 | Pre-XDR-TB | lineage4.8 | None | ERR4796627 | Pre-XDR-TB | lineage2.2.1 | in | ERR4423666 | Other | lineage3.1.1 | None | SRR29231544 | MDR-TB | lineage4.3.4.1 | None | ERR11798728 | MDR-TB | lineage4.2.1 | None | ERR4423655 | Other | lineage3.1.1 | None | ERR4423661 | MDR-TB | lineage3.1.1 | None | ERR4423695 | RR-TB | lineage3.1.1 | None | SRR28045009 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972336 | MDR-TB | lineage2.2.1 | None | ERR4831260 | MDR-TB | lineage4.1.2.1 | de | ERR4829082 | MDR-TB | lineage4.1.2.1 | it | ERR2707085 | MDR-TB | lineage4.1.2 | cd | ERR7911318 | MDR-TB | lineage2.2.1 | vn | ERR2707109 | MDR-TB | lineage4.6.1.2 | cd | ERR2707216 | MDR-TB | lineage4.3.4.1 | cd | ERR5865586 | MDR-TB | lineage2.2.1 | None | SRR25827530 | XDR-TB | lineage2.2.1;lineage4 | None | SRR25827641 | XDR-TB | lineage2.2.1;lineage4 | None | ERR4423672 | MDR-TB | lineage3.1.1 | None | SRR15316526 | MDR-TB | lineage2.2.1;lineage4 | None | ERR158586 | MDR-TB | lineage2.2.1 | ru | ERR3170404 | MDR-TB | lineage5.1.1 | gh | ERR2516883 | MDR-TB | lineage3 | gb | SRR6807702 | MDR-TB | lineage4.2.1 | None | ERR4423663 | MDR-TB | lineage3.1.1 | None | ERR040123 | MDR-TB | lineage3.1.2.1 | ug | ERR987706 | MDR-TB | lineage4.3.4.2.1 | None | SRR29273907 | MDR-TB | lineage4.8 | None | SRR28394027 | MDR-TB | lineage4.1.2.1 | None | ERR10680167 | MDR-TB | lineage4.8 | None | SRR3105790 | MDR-TB | lineage2.2.1.1 | None | SRR7535045 | MDR-TB | lineage4.3.4.2.1 | None | SRR22536483 | MDR-TB | lineage4.1.2.1 | None | ERR4423761 | MDR-TB | lineage3.1.1 | None | SRR29385446 | XDR-TB | lineage2.2.2 | None | ERR4813726 | MDR-TB | lineage4.1.2.1 | None | ERR11080965 | MDR-TB | lineage4.8 | None | ERR4423665 | Other | lineage3.1.1 | None | ERR5865587 | MDR-TB | lineage2.2.1 | None | SRR12882484 | MDR-TB | lineage3.1.1 | None | ERR5865148 | MDR-TB | lineage2.2.1 | None | ERR4423702 | MDR-TB | lineage3.1.1 | None | ERR4276885 | MDR-TB | lineage4.1.2.1 | None | ERR6358716 | MDR-TB | lineage4.6.1.2 | None | SRR13180269 | MDR-TB | lineage4.1.2.1 | None | SRR3082128 | MDR-TB | lineage2.2.1 | None | ERR4423701 | RR-TB | lineage3.1.1 | None | SRR29274110 | MDR-TB | lineage4.8 | None | SRR29274060 | MDR-TB | lineage4.8 | None | SRR5535907 | MDR-TB | lineage3.1.1 | None | ERR4553857 | MDR-TB | lineage4 | None | ERR4423662 | MDR-TB | lineage3.1.1 | None | SRR29017138 | Pre-XDR-TB | lineage4 | None | ERR13276395 | MDR-TB | lineage4.8 | None |
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