lineage | Count |
---|---|
lineage4.6.1.2 | 4 |
lineage4.1.2.1 | 9 |
lineage3 | 5 |
lineage3.1.2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.4.2 | 1 |
lineage2.2.1 | 10 |
lineage4.2.1 | 3 |
lineage4.8 | 1 |
lineage5.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage3.1.1 | 6 |
lineage4 | 3 |
lineage4.3.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 50 |
ID | Drug resistance | Lineage | Country iso2 | ERR2707109 | MDR-TB | lineage4.6.1.2 | cd | SRR22536494 | MDR-TB | lineage4.1.2.1 | None | ERR2510522 | MDR-TB | lineage3 | pk | ERR040123 | MDR-TB | lineage3.1.2.1 | ug | ERR6358912 | MDR-TB | lineage4.6.1.2 | None | ERR2707085 | MDR-TB | lineage4.1.2 | cd | ERR4822304 | MDR-TB | lineage4.1.2.1 | de | ERR3148184 | MDR-TB | lineage4.3.4.2 | mx | ERR2510568 | Pre-XDR-TB | lineage3 | pk | ERR1199120 | MDR-TB | lineage4.6.1.2 | cd | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584585 | MDR-TB | lineage4.2.1 | md | ERR2510450 | MDR-TB | lineage3 | pk | ERR4798805 | Pre-XDR-TB | lineage4.8 | in | ERR2516883 | MDR-TB | lineage3 | gb | ERR158586 | MDR-TB | lineage2.2.1 | ru | ERR2510365 | Pre-XDR-TB | lineage3 | pk | ERR4830996 | Pre-XDR-TB | lineage2.2.1 | np | ERR4829956 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829082 | MDR-TB | lineage4.1.2.1 | it | ERR7911318 | MDR-TB | lineage2.2.1 | vn | ERR4796627 | Pre-XDR-TB | lineage2.2.1 | in | SRR22536483 | MDR-TB | lineage4.1.2 | None | ERR3170404 | MDR-TB | lineage5.1.1 | gh | ERR2707216 | MDR-TB | lineage4.3.4.1 | cd | SRR23310964 | MDR-TB | lineage4.2.1 | None | SRR23311030 | MDR-TB | lineage4.2.1 | None | ERR4423662 | MDR-TB | lineage3.1.1 | None | SRR18665471 | MDR-TB | lineage4.1.2.1 | None | ERR4553857 | MDR-TB | lineage4 | None | ERR5865149 | MDR-TB | lineage2.2.1 | None | SRR12882484 | MDR-TB | lineage3.1.1 | None | SRR5535914 | MDR-TB | lineage3.1.1 | None | ERR4553841 | Pre-XDR-TB | lineage4 | None | SRR7517833 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831260 | MDR-TB | lineage4.1.2.1 | de | ERR6358716 | MDR-TB | lineage4.6.1.2 | None | ERR5865725 | MDR-TB | lineage2.2.1 | None | SRR7535045 | MDR-TB | lineage4.3.4.2.1 | None | SRR13180299 | MDR-TB | lineage4.1.2.1 | None | ERR5865148 | MDR-TB | lineage2.2.1 | None | ERR4276885 | MDR-TB | lineage4.1.2.1 | None | ERR4423694 | MDR-TB | lineage3.1.1 | None | ERR4423767 | MDR-TB | lineage3.1.1 | None | SRR15316526 | MDR-TB | lineage4;lineage2.2.1 | None | ERR5865587 | MDR-TB | lineage2.2.1 | None | ERR4553613 | MDR-TB | lineage4 | None | SRR20632775 | MDR-TB | lineage2.2.1 | None | ERR4423701 | MDR-TB | lineage3.1.1 | None | SRR22528546 | MDR-TB | lineage4.1.2.1 | None |
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