Rv3854c - c.-10G>A
Drug resistance types
163 Sensitive
6 RR-TB
17 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 209 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage1.1.1 | 2 |
| lineage2.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4;lineage1.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 217 |
Geographic prevalence
Country level data for this variant is available for 158 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17729392 | Sensitive | lineage1.1.1 | None | SRR16370450 | HR-TB | lineage1.1.1 | None | SRR16370601 | Sensitive | lineage1.1.1 | None | SRR17729362 | Sensitive | lineage1.1.1 | None | SRR17729380 | Sensitive | lineage1.1.1 | None | SRR17729386 | Sensitive | lineage1.1.1 | None | SRR17729395 | Sensitive | lineage1.1.1 | None | SRR17729396 | Sensitive | lineage1.1.1 | None | SRR17729399 | Sensitive | lineage1.1.1 | None | SRR17729419 | Sensitive | lineage1.1.1 | None | SRR17729413 | Sensitive | lineage1.1.1 | None | SRR20969611 | Sensitive | lineage1.1.1 | None | SRR18054789 | MDR-TB | lineage4.5 | None | SRR19315449 | Sensitive | lineage1.1.1 | None | SRR20969694 | Sensitive | lineage1.1.1 | None | SRR20969608 | Sensitive | lineage1.1.1 | None | SRR20969836 | RR-TB | lineage1.1.1 | None | SRR21727568 | Sensitive | lineage1.1.1 | None | SRR20970035 | Other | lineage1.1.1 | None | SRR21676422 | Sensitive | lineage1.1.1 | None | SRR21710918 | Sensitive | lineage1.1.1 | None | ERR11067896 | Sensitive | lineage1.1.1 | None | ERR11068072 | Sensitive | lineage1.1.1 | None | ERR11068307 | Sensitive | lineage1.1.1 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR4815458 | Sensitive | lineage1.1.1 | gb | ERR4815678 | HR-TB | lineage1.1.1 | None | ERR4815400 | Other | lineage1.1.1 | None | SRR5073604 | Sensitive | lineage1.1.1 | vn | ERR4815478 | RR-TB | lineage2.2.1;lineage1.1.1 | gb | SRR5065432 | Sensitive | lineage1.1.1 | vn | ERR3275521 | Sensitive | lineage1.1.1 | nl | ERR4817466 | Other | lineage1.1.1 | gb | ERR3275186 | Sensitive | lineage1.1.1 | nl | ERR4817740 | Sensitive | lineage1.1.1 | gb | SRR5073901 | Sensitive | lineage1.1.1 | vn | SRR5073967 | Sensitive | lineage1.1.1 | vn | ERR2513203 | Sensitive | lineage1.1.1 | gb | SRR5065704 | Sensitive | lineage1.1.1 | vn | SRR5067226 | MDR-TB | lineage1.1.1 | vn | ERR2516456 | Sensitive | lineage1.1.1 | pe | SRR5067583 | Sensitive | lineage1.1.1 | vn | ERR4819429 | HR-TB | lineage1.1.1 | None | ERR4819606 | Other | lineage1.1.1 | gb | ERR2514371 | Sensitive | lineage1.1.1 | gb | ERR2446222 | Sensitive | lineage1.1.1 | nl | ERR2514659 | Sensitive | lineage1.1.1 | gb | ERR4820076 | Other | lineage1.1.1 | gb | ERR4819822 | Sensitive | lineage1.1.1 | gb | ERR2517437 | Sensitive | lineage1.1.1 | nl | ERR4821316 | HR-TB | lineage1.1.1 | None | ERR2517642 | Sensitive | lineage1.1.1 | nl | SRR5709916 | MDR-TB | lineage1.1.1 | th | SRR5709946 | Sensitive | lineage1.1.1 | th | SRR5709745 | Sensitive | lineage1.1.1 | th | SRR5709758 | Pre-XDR-TB | lineage1.1.1 | th | SRR5709944 | Sensitive | lineage1.1.1 | th | SRR5709979 | Sensitive | lineage1.1.1 | th | SRR5709777 | Sensitive | lineage1.1.1 | th | SRR5709957 | Sensitive | lineage1.1.1 | th | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | SRR5710018 | Pre-XDR-TB | lineage1.1.1 | th | SRR5709819 | MDR-TB | lineage1.1.1 | th | SRR5709832 | Sensitive | lineage1.1.1 | th | ERR4828147 | Sensitive | lineage1.1.1 | vn | SRR5709858 | HR-TB | lineage1.1.1 | th | SRR5709856 | HR-TB | lineage1.1.1 | th | ERR4828351 | HR-TB | lineage2.2.1;lineage1.1.1 | vn | SRR6339638 | Sensitive | lineage1.1.1 | None | SRR6480388 | Sensitive | lineage1.1.1 | None | SRR6153193 | HR-TB | lineage1.1.1 | ca | SRR6153048 | HR-TB | lineage1.1.1 | ca | ERR2446548 | Sensitive | lineage1.1.1 | nl | ERR392510 | Sensitive | lineage1.1.1 | None | ERR1023354 | Sensitive | lineage1.1.1 | None | ERR3273175 | Pre-XDR-TB | lineage1.1.1 | None | SRR6797606 | Sensitive | lineage1.1.3.1 | None | ERR3273199 | RR-TB | lineage1.1.1 | None | ERR718197 | Sensitive | lineage1.1.1 | th | ERR718220 | Sensitive | lineage1.1.1 | th | ERR718198 | Sensitive | lineage1.1.1 | th | ERR718201 | Sensitive | lineage1.1.1 | th | ERR718217 | Sensitive | lineage1.1.1 | th | ERR718229 | Sensitive | lineage1.1.1 | th | ERR718223 | Sensitive | lineage1.1.1 | th | ERR718227 | Sensitive | lineage1.1.1 | th | ERR718237 | Sensitive | lineage1.1.1 | th | ERR718286 | Sensitive | lineage1.1.1 | th | ERR718285 | Sensitive | lineage1.1.1 | th | ERR718268 | Sensitive | lineage1.1.1 | None | ERR718331 | Sensitive | lineage1.1.1 | th | ERR718295 | Sensitive | lineage1.1.1 | th | ERR718322 | Sensitive | lineage1.1.1 | th | ERR718334 | Sensitive | lineage1.1.1 | th | ERR718310 | Sensitive | lineage1.1.1 | th | ERR718346 | Sensitive | lineage1.1.1 | th | ERR718340 | Sensitive | lineage1.1.1 | th | ERR718366 | Sensitive | lineage1.1.1 | th | ERR718358 | Sensitive | lineage1.1.1 | th | ERR718344 | Other | lineage1.1.1 | th | ERR718395 | Sensitive | lineage1.1.1 | th | ERR718371 | Sensitive | lineage1.1.1 | th | ERR718390 | Sensitive | lineage1.1.1 | th | ERR718386 | MDR-TB | lineage1.1.1 | th | ERR718397 | Sensitive | lineage1.1.1 | th | ERR718501 | Other | lineage1.1.1 | th | ERR718410 | Sensitive | lineage1.1.1 | th | ERR718491 | Sensitive | lineage1.1.1 | th | ERR718421 | Sensitive | lineage1.1.1 | th | ERR718418 | Sensitive | lineage1.1.1 | th | ERR718445 | RR-TB | lineage1.1.1 | th | ERR718447 | Sensitive | lineage1.1.1 | th | ERR718487 | Sensitive | lineage1.1.1 | th | ERR718552 | Sensitive | lineage1.1.1 | th | ERR718512 | Sensitive | lineage1.1.1 | th | ERR718514 | MDR-TB | lineage1.1.1 | th | ERR718529 | Other | lineage1.1.1 | th | ERR718522 | Sensitive | lineage1.1.1 | th | ERR718531 | Sensitive | lineage1.1.1 | th | ERR718553 | Sensitive | lineage1.1.1 | th | ERR751681 | Sensitive | lineage1.1.1 | th | ERR718558 | Sensitive | lineage1.1.1 | th | ERR751684 | Sensitive | lineage1.1.1 | th | ERR751717 | Sensitive | lineage1.1.1 | th | ERR751744 | Sensitive | lineage1.1.1 | th | ERR751707 | Sensitive | lineage1.1.1 | th | ERR751759 | Sensitive | lineage1.1.1 | th | ERR751732 | Sensitive | lineage1.1.1 | th | ERR751803 | HR-TB | lineage1.1.1 | th | ERR751780 | Sensitive | lineage1.1.1 | th | ERR751777 | Sensitive | lineage1.1.1 | th | ERR751783 | Sensitive | lineage1.1.1 | th | ERR751808 | Sensitive | lineage1.1.1 | th | ERR751823 | Sensitive | lineage1.1.1 | th | ERR751880 | Sensitive | lineage1.1.1 | th | ERR751878 | Sensitive | lineage1.1.1 | th | ERR751865 | Other | lineage1.1.1 | None | ERR751867 | MDR-TB | lineage1.1.1 | th | ERR751909 | Sensitive | lineage1.1.1 | th | ERR751892 | Other | lineage1.1.1 | th | ERR751916 | HR-TB | lineage1.1.1 | th | ERR751982 | Sensitive | lineage1.1.1 | th | ERR751927 | Sensitive | lineage1.1.1 | th | ERR751999 | RR-TB | lineage1.1.1 | th | ERR752006 | Sensitive | lineage1.1.1 | th | ERR752003 | Sensitive | lineage1.1.1 | th | ERR752026 | HR-TB | lineage1.1.1 | th | ERR752019 | Sensitive | lineage1.1.1 | th | ERR752018 | Sensitive | lineage1.1.1 | th | ERR752081 | Sensitive | lineage1.1.1 | th | ERR752035 | Sensitive | lineage1.1.1 | th | ERR752062 | Sensitive | lineage1.1.1 | th | ERR752044 | Other | lineage1.1.1 | th | ERR752058 | Sensitive | lineage1.1.1 | th | ERR752067 | Sensitive | lineage1.1.1 | th | ERR752069 | Sensitive | lineage1.1.1 | th | ERR752133 | Sensitive | lineage1.1.1 | th | ERR752102 | Sensitive | lineage1.1.1 | th | ERR752103 | Sensitive | lineage1.1.1 | th | ERR752138 | Sensitive | lineage1.1.1 | th | ERR752131 | MDR-TB | lineage1.1.1 | th | ERR752122 | Sensitive | lineage1.1.1 | th | ERR752179 | Sensitive | lineage1.1.1 | th | ERR752161 | Sensitive | lineage1.1.1 | th | ERR752170 | Sensitive | lineage1.1.1 | th | ERR752249 | MDR-TB | lineage1.1.1 | th | ERR752197 | Other | lineage1.1.1 | th | ERR752238 | Other | lineage1.1.1 | th | ERR752256 | Sensitive | lineage1.1.1 | th | ERR752209 | Sensitive | lineage1.1.1 | th | ERR752244 | Sensitive | lineage1.1.1 | th | ERR752285 | Sensitive | lineage1.1.1 | th | ERR767962 | Sensitive | lineage1.1.1 | th | ERR767976 | Sensitive | lineage1.1.1 | th | ERR767965 | Sensitive | lineage1.1.1 | th | ERR767975 | Sensitive | lineage1.1.1 | th | ERR767979 | Other | lineage1.1.1 | th | ERR768008 | Sensitive | lineage1.1.1 | th | ERR767995 | Other | lineage1.1.1 | th | ERR767999 | Sensitive | lineage1.1.1 | th | ERR767985 | Other | lineage1.1.1 | th | ERR767986 | Sensitive | lineage1.1.1 | th | ERR768025 | HR-TB | lineage1.1.1 | th | ERR768014 | Sensitive | lineage1.1.1 | th | ERR775778 | Sensitive | lineage1.1.1 | th | ERR768033 | Sensitive | lineage1.1.1 | th | ERR768050 | Sensitive | lineage1.1.1 | th | ERR775760 | Sensitive | lineage1.1.1 | th | ERR775781 | Sensitive | lineage1.1.1 | th | ERR768037 | Sensitive | lineage1.1.1 | th | ERR768049 | Sensitive | lineage1.1.1 | th | ERR775758 | Sensitive | lineage1.1.1 | th | ERR775783 | Sensitive | lineage1.1.1 | th | ERR775802 | MDR-TB | lineage1.1.1 | None | ERR775801 | Sensitive | lineage1.1.1 | None | ERR775797 | Sensitive | lineage1.1.1 | th | ERR8158042 | Sensitive | lineage2.2.1 | None | ERR7902608 | Sensitive | lineage1.1.1 | None | ERR7911293 | Other | lineage1.1.1 | vn | ERR7902678 | HR-TB | lineage1.1.1 | None | ERR846994 | Sensitive | lineage1.1.1 | th | ERR9117744 | Sensitive | lineage1.1.1 | None | ERR9124916 | Sensitive | lineage1.1.1 | None | SRR12882054 | Sensitive | lineage1.1.1 | None | SRR12199444 | Sensitive | lineage4;lineage1.1.1 | None | SRR12199480 | Sensitive | lineage1.1.1 | None | SRR10809077 | Sensitive | lineage1.1.1 | None | SRR10809197 | Sensitive | lineage1.1.1 | None | SRR10809201 | Sensitive | lineage1.1.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR12199439 | HR-TB | lineage4;lineage1.1.1 | None | SRR12882589 | Sensitive | lineage1.1.1 | None | SRR12882255 | Sensitive | lineage1.1.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14519811 | Sensitive | lineage1.1.1 | None | SRR14270082 | RR-TB | lineage1.1.1 | None | SRR14520113 | HR-TB | lineage1.1.1 | None |
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