Rv3854c - c.-10G>A
Drug resistance types
208 Sensitive
6 RR-TB
21 HR-TB
28 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 288 |
| lineage1.1.1;lineage2.2.1 | 3 |
| lineage1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1;lineage4 | 2 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 296 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR775802 | HR-TB | lineage1.1.1 | None | SRR21727568 | Sensitive | lineage1.1.1 | None | SRR29096137 | Sensitive | lineage1.1.1 | None | SRR5709832 | Sensitive | lineage1.1.1 | th | SRR5709916 | MDR-TB | lineage1.1.1 | th | SRR5709758 | Pre-XDR-TB | lineage1.1.1 | th | SRR21732625 | Sensitive | lineage1.1.1 | None | SRR22251977 | Sensitive | lineage1.1.1 | None | ERR7902678 | HR-TB | lineage1.1.1 | None | ERR752006 | Sensitive | lineage1.1.1 | th | ERR752285 | Sensitive | lineage1.1.1 | th | ERR752138 | Sensitive | lineage1.1.1 | th | ERR768008 | Sensitive | lineage1.1.1 | th | ERR767975 | Sensitive | lineage1.1.1 | th | ERR767962 | Sensitive | lineage1.1.1 | th | ERR751909 | Sensitive | lineage1.1.1 | th | ERR718358 | Sensitive | lineage1.1.1 | th | ERR718346 | Sensitive | lineage1.1.1 | th | ERR752249 | MDR-TB | lineage1.1.1 | th | ERR752197 | Other | lineage1.1.1 | th | ERR718366 | Sensitive | lineage1.1.1 | th | ERR718501 | Other | lineage1.1.1 | th | ERR718227 | Sensitive | lineage1.1.1 | th | ERR718386 | MDR-TB | lineage1.1.1 | th | ERR751684 | Sensitive | lineage1.1.1 | th | SRR3725361 | HR-TB | lineage1.1.1 | None | ERR718445 | RR-TB | lineage1.1.1 | th | ERR718553 | Sensitive | lineage1.1.1 | th | ERR718310 | Sensitive | lineage1.1.1 | th | ERR718334 | Sensitive | lineage1.1.1 | th | ERR768049 | Sensitive | lineage1.1.1 | th | ERR718418 | Sensitive | lineage1.1.1 | th | ERR718447 | Sensitive | lineage1.1.1 | th | ERR767976 | Sensitive | lineage1.1.1 | th | ERR718285 | Sensitive | lineage1.1.1 | th | ERR718487 | Sensitive | lineage1.1.1 | th | ERR718220 | Sensitive | lineage1.1.1 | th | ERR768014 | Sensitive | lineage1.1.1 | th | ERR752209 | Sensitive | lineage1.1.1 | th | ERR752058 | Sensitive | lineage1.1.1 | th | ERR718514 | MDR-TB | lineage1.1.1 | th | ERR752102 | Sensitive | lineage1.1.1 | th | ERR752035 | Sensitive | lineage1.1.1 | th | ERR718286 | Sensitive | lineage1.1.1 | th | ERR752069 | Sensitive | lineage1.1.1 | th | ERR751916 | HR-TB | lineage1.1.1 | th | ERR751878 | Sensitive | lineage1.1.1 | th | ERR718229 | Sensitive | lineage1.1.1 | th | ERR718217 | Sensitive | lineage1.1.1 | th | ERR751803 | HR-TB | lineage1.1.1 | th | ERR718197 | Sensitive | lineage1.1.1 | th | ERR751717 | Sensitive | lineage1.1.1 | th | ERR751777 | Sensitive | lineage1.1.1 | th | ERR751707 | Sensitive | lineage1.1.1 | th | ERR752003 | Sensitive | lineage1.1.1 | th | ERR767986 | Sensitive | lineage1.1.1 | th | ERR751780 | Sensitive | lineage1.1.1 | th | ERR751759 | Sensitive | lineage1.1.1 | th | ERR718421 | Sensitive | lineage1.1.1 | th | ERR718390 | Sensitive | lineage1.1.1 | th | ERR752067 | Sensitive | lineage1.1.1 | th | ERR751892 | Other | lineage1.1.1 | th | ERR752081 | Sensitive | lineage1.1.1 | th | ERR775781 | Sensitive | lineage1.1.1 | th | SRR6153193 | HR-TB | lineage1.1.1 | ca | SRR6153048 | HR-TB | lineage1.1.1 | ca | ERR4820076 | Other | lineage1.1.1 | gb | ERR2516456 | Sensitive | lineage1.1.1 | pe | ERR4817466 | Other | lineage1.1.1 | gb | ERR4817740 | Sensitive | lineage1.1.1 | gb | ERR2514371 | Sensitive | lineage1.1.1 | gb | ERR4828351 | HR-TB | lineage1.1.1;lineage2.2.1 | vn | SRR22249800 | Sensitive | lineage1.1.1 | None | SRR22251538 | Sensitive | lineage1.1.1 | None | SRR29356708 | Sensitive | lineage1.1.1 | None | ERR12328176 | MDR-TB | lineage1.1.1;lineage1.2.1.2.1 | None | SRR23316605 | Sensitive | lineage1.1.1 | None | SRR29050820 | HR-TB | lineage1.1.1;lineage2.2.1 | None | ERR13093915 | Sensitive | lineage1.1.1 | None | SRR3724780 | Sensitive | lineage1.1.1 | None | SRR20970035 | Other | lineage1.1.1 | None | SRR5073967 | Sensitive | lineage1.1.1 | vn | SRR27450288 | Sensitive | lineage1.1.1 | None | SRR5709856 | HR-TB | lineage1.1.1 | th | SRR14520113 | HR-TB | lineage1.1.1 | None | SRR21732762 | Sensitive | lineage1.1.1 | None | ERR12328175 | MDR-TB | lineage1.1.1 | None | SRR11662217 | MDR-TB | lineage1.1.1 | None | ERR2446548 | Sensitive | lineage1.1.1 | nl | SRR21732782 | Sensitive | lineage1.1.1 | None | ERR3275186 | Sensitive | lineage1.1.1 | nl | SRR11662395 | MDR-TB | lineage1.1.1 | None | SRR23316588 | HR-TB | lineage1.1.1 | None | ERR7902608 | Sensitive | lineage1.1.1 | None | ERR9124916 | Sensitive | lineage1.1.1 | None | SRR7069934 | Sensitive | lineage1.1.1 | None | SRR29096971 | Sensitive | lineage1.1.1 | None | SRR6480388 | Other | lineage1.1.1 | None | SRR21732223 | Other | lineage1.1.1 | None | SRR21732082 | Sensitive | lineage1.1.1 | None | SRR29050985 | Sensitive | lineage1.1.1 | None | SRR17729399 | Sensitive | lineage1.1.1 | None | SRR12882589 | Sensitive | lineage1.1.1 | None | ERR4815400 | Other | lineage1.1.1 | None | SRR29604869 | Sensitive | lineage1.1.1 | None | SRR6797606 | Sensitive | lineage1.1.3.1 | None | SRR29124323 | Sensitive | lineage1.1.1 | None | SRR21710918 | Sensitive | lineage1.1.1 | None | SRR12882255 | Sensitive | lineage1.1.1 | None | SRR30182329 | Sensitive | lineage1.1.1 | None | ERR13267661 | Sensitive | lineage1.1.1 | None | SRR29441046 | Sensitive | lineage1.1.1 | None | SRR10809197 | Sensitive | lineage1.1.1 | None | SRR20969608 | Sensitive | lineage1.1.1 | None | ERR751681 | Sensitive | lineage1.1.1 | th | ERR752062 | Sensitive | lineage1.1.1 | th | ERR767965 | Sensitive | lineage1.1.1 | th | ERR718395 | Sensitive | lineage1.1.1 | th | ERR752256 | Other | lineage1.1.1 | th | ERR751927 | Sensitive | lineage1.1.1 | th | SRR22251165 | Sensitive | lineage1.1.1 | None | ERR752044 | Other | lineage1.1.1 | th | ERR752018 | Sensitive | lineage1.1.1 | th | SRR5709944 | Sensitive | lineage1.1.1 | th | ERR7911293 | Other | lineage1.1.1 | vn | ERR1023354 | Sensitive | lineage1.1.1 | None | SRR5709777 | Sensitive | lineage1.1.1 | th | ERR12328192 | Sensitive | lineage1.1.1 | None | ERR4815458 | Sensitive | lineage1.1.1 | gb | ERR4815478 | RR-TB | lineage1.1.1;lineage2.2.1 | gb | ERR2513203 | Sensitive | lineage1.1.1 | gb | ERR4828147 | Sensitive | lineage1.1.1 | vn | SRR11662127 | MDR-TB | lineage1.1.1 | None | SRR11662170 | MDR-TB | lineage1.1.1 | None | SRR3724943 | Sensitive | lineage1.1.1 | None | SRR5709819 | MDR-TB | lineage1.1.1 | th | SRR11662202 | MDR-TB | lineage1.1.1 | None | SRR11662133 | MDR-TB | lineage1.1.1 | None | ERR12328178 | Sensitive | lineage1.1.1 | None | SRR20969611 | Sensitive | lineage1.1.1 | None | SRR5709858 | HR-TB | lineage1.1.1 | th | ERR3273175 | Pre-XDR-TB | lineage1.1.1 | None | ERR9117744 | Sensitive | lineage1.1.1 | None | ERR11067896 | Other | lineage1.1.1 | None | SRR24799272 | Sensitive | lineage1.1.1 | None | SRR16370601 | Sensitive | lineage1.1.1 | None | SRR6339638 | Sensitive | lineage1.1.1 | None | ERR4821316 | HR-TB | lineage1.1.1 | None | SRR5065432 | Sensitive | lineage1.1.1 | vn | SRR20969836 | RR-TB | lineage1.1.1 | None | ERR12328191 | Sensitive | lineage1.1.1 | None | SRR27450583 | Sensitive | lineage1.1.1 | None | ERR4819429 | HR-TB | lineage1.1.1 | None | SRR17729386 | Sensitive | lineage1.1.1 | None | SRR17729413 | Sensitive | lineage1.1.1 | None | ERR13285468 | Sensitive | lineage1.1.1 | None | ERR4815678 | HR-TB | lineage1.1.1 | None | SRR29097062 | Sensitive | lineage1.1.1 | None | SRR11662532 | MDR-TB | lineage1.1.1 | None | SRR29440975 | Sensitive | lineage1.1.1 | None | SRR5709946 | Sensitive | lineage1.1.1 | th | SRR29096901 | Other | lineage1.1.1 | None | SRR19315449 | Sensitive | lineage1.1.1 | None | SRR22249665 | Sensitive | lineage1.1.1 | None | SRR12882054 | Sensitive | lineage1.1.1 | None | SRR11662488 | MDR-TB | lineage1.1.1 | None | SRR22249382 | Sensitive | lineage1.1.1 | None | SRR29096694 | Sensitive | lineage1.1.1 | None | SRR5709957 | Sensitive | lineage1.1.1 | th | SRR5067226 | MDR-TB | lineage1.1.1 | vn | SRR5709979 | Sensitive | lineage1.1.1 | th | SRR5073901 | Sensitive | lineage1.1.1 | vn | SRR11662615 | MDR-TB | lineage1.1.1 | None | ERR12328169 | Sensitive | lineage1.1.1 | None | SRR21676422 | Sensitive | lineage1.1.1 | None | SRR29052865 | Sensitive | lineage1.1.1 | None | SRR22251253 | Sensitive | lineage1.1.1 | None | ERR11068307 | Sensitive | lineage1.1.1 | None | SRR17729419 | Sensitive | lineage1.1.1 | None | SRR29055723 | Sensitive | lineage1.1.1 | None | SRR21689544 | Sensitive | lineage1.1.1 | None | SRR17729362 | Sensitive | lineage1.1.1 | None | SRR11662600 | MDR-TB | lineage1.1.1 | None | ERR2446222 | Sensitive | lineage1.1.1 | nl | SRR11662163 | MDR-TB | lineage1.1.1 | None | SRR11662290 | Pre-XDR-TB | lineage1.1.1 | None | ERR751808 | Sensitive | lineage1.1.1 | th | ERR767999 | Sensitive | lineage1.1.1 | th | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR752131 | MDR-TB | lineage1.1.1 | th | ERR751744 | Sensitive | lineage1.1.1 | th | ERR767985 | Other | lineage1.1.1 | th | ERR751982 | Sensitive | lineage1.1.1 | th | ERR718552 | Sensitive | lineage1.1.1 | th | ERR751867 | MDR-TB | lineage1.1.1 | th | ERR752238 | Other | lineage1.1.1 | th | ERR767979 | Other | lineage1.1.1 | th | ERR751732 | Sensitive | lineage1.1.1 | th | ERR718331 | Sensitive | lineage1.1.1 | th | ERR718340 | Sensitive | lineage1.1.1 | th | ERR718322 | Sensitive | lineage1.1.1 | th | ERR718295 | Sensitive | lineage1.1.1 | th | ERR718529 | Other | lineage1.1.1 | th | ERR752170 | Sensitive | lineage1.1.1 | th | ERR768037 | Sensitive | lineage1.1.1 | th | ERR752161 | Sensitive | lineage1.1.1 | th | ERR752133 | Sensitive | lineage1.1.1 | th | ERR718344 | Other | lineage1.1.1 | th | ERR751823 | Sensitive | lineage1.1.1 | th | ERR752122 | Sensitive | lineage1.1.1 | th | ERR752244 | Sensitive | lineage1.1.1 | th | ERR775758 | Sensitive | lineage1.1.1 | th | ERR768025 | HR-TB | lineage1.1.1 | th | ERR752179 | Sensitive | lineage1.1.1 | th | ERR768033 | Sensitive | lineage1.1.1 | th | ERR718512 | Sensitive | lineage1.1.1 | th | ERR718522 | Sensitive | lineage1.1.1 | th | ERR718237 | Sensitive | lineage1.1.1 | th | ERR718371 | Sensitive | lineage1.1.1 | th | ERR718531 | Sensitive | lineage1.1.1 | th | ERR718558 | Sensitive | lineage1.1.1 | th | ERR775760 | Sensitive | lineage1.1.1 | th | ERR718410 | Sensitive | lineage1.1.1 | th | ERR768050 | Sensitive | lineage1.1.1 | th | ERR775797 | Sensitive | lineage1.1.1 | th | ERR718201 | Sensitive | lineage1.1.1 | th | ERR846994 | Sensitive | lineage1.1.1 | th | ERR718223 | Sensitive | lineage1.1.1 | th | ERR767995 | Other | lineage1.1.1 | th | ERR718198 | Sensitive | lineage1.1.1 | th | ERR752019 | Sensitive | lineage1.1.1 | th | ERR718397 | Sensitive | lineage1.1.1 | th | ERR718491 | Sensitive | lineage1.1.1 | th | ERR775778 | Sensitive | lineage1.1.1 | th | ERR775783 | Sensitive | lineage1.1.1 | th | ERR752026 | HR-TB | lineage1.1.1 | th | ERR751783 | Sensitive | lineage1.1.1 | th | SRR17729392 | Sensitive | lineage1.1.1 | None | SRR17729395 | Sensitive | lineage1.1.1 | None | SRR17729396 | Sensitive | lineage1.1.1 | None | SRR12199439 | Sensitive | lineage1.1.1;lineage4 | None | SRR24083613 | Sensitive | lineage1.1.1 | None | ERR752103 | Sensitive | lineage1.1.1 | th | ERR751999 | RR-TB | lineage1.1.1 | th | ERR751880 | Sensitive | lineage1.1.1 | th | ERR2517437 | Sensitive | lineage1.1.1 | nl | ERR2517642 | Sensitive | lineage1.1.1 | nl | ERR4819606 | Other | lineage1.1.1 | gb | ERR4819822 | Sensitive | lineage1.1.1 | gb | ERR2514659 | Sensitive | lineage1.1.1 | gb | SRR5065704 | Other | lineage1.1.1 | vn | ERR11068072 | Sensitive | lineage1.1.1 | None | SRR5710018 | Pre-XDR-TB | lineage1.1.1 | th | SRR18054789 | MDR-TB | lineage4.5 | None | SRR28776755 | Other | lineage1.1.1 | None | SRR5073604 | Sensitive | lineage1.1.1 | vn | SRR11662496 | MDR-TB | lineage1.1.1 | None | SRR21732881 | Sensitive | lineage1.1.1 | None | SRR11972438 | Sensitive | lineage1.1.1 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR3275521 | Sensitive | lineage1.1.1 | nl | SRR26937136 | MDR-TB | lineage1.1.1 | None | SRR11662448 | MDR-TB | lineage1.1.1 | None | ERR3273199 | RR-TB | lineage1.1.1 | None | SRR5067583 | Sensitive | lineage1.1.1 | vn | SRR14519811 | Sensitive | lineage1.1.1 | None | SRR11662550 | MDR-TB | lineage1.1.1 | None | SRR26399306 | Other | lineage1.1.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR10809077 | Sensitive | lineage1.1.1 | None | SRR29052776 | HR-TB | lineage1.1.1 | None | SRR10809201 | Other | lineage1.1.1 | None | ERR12328184 | Other | lineage1.1.1 | None | SRR22251251 | HR-TB | lineage1.1.1 | None | ERR392510 | Other | lineage1.1.1 | None | SRR24223042 | Sensitive | lineage1.1.1 | None | SRR11662489 | MDR-TB | lineage1.1.1 | None | SRR16370450 | HR-TB | lineage1.1.1 | None | ERR751865 | Other | lineage1.1.1 | None | SRR30182425 | Sensitive | lineage1.1.1 | None | SRR20969694 | Sensitive | lineage1.1.1 | None | SRR27450514 | Sensitive | lineage1.1.1 | None | SRR29096771 | Sensitive | lineage1.1.1 | None | SRR21733144 | Sensitive | lineage1.1.1 | None | SRR14270082 | RR-TB | lineage1.1.1 | None | SRR5709745 | Sensitive | lineage1.1.1 | th | SRR12199444 | Sensitive | lineage1.1.1;lineage4 | None | SRR12199480 | Other | lineage1.1.1 | None | SRR11662215 | MDR-TB | lineage1.1.1 | None | SRR26399889 | Sensitive | lineage1.1.1 | None | SRR29096806 | Sensitive | lineage1.1.1 | None | SRR21732610 | Sensitive | lineage1.1.1 | None | SRR17729380 | Sensitive | lineage1.1.1 | None | SRR26399590 | Sensitive | lineage1.1.1 | None | SRR28044508 | Sensitive | lineage1.1.1 | None | SRR29440969 | Sensitive | lineage1.1.1 | None |
|---|
