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SRA data
Rv3854c
- c.-10G>A
Drug resistance types
208 Sensitive
6 RR-TB
21 HR-TB
28 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.1
288
lineage1.1.1;lineage2.2.1
3
lineage1.1.1;lineage4
2
lineage1.1.3.1
1
lineage4.5
1
lineage1.1.1;lineage1.2.1.2.1
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
296
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023354
Sensitive
lineage1.1.1
None
ERR11067896
Other
lineage1.1.1
None
ERR11068072
Sensitive
lineage1.1.1
None
ERR11068307
Sensitive
lineage1.1.1
None
ERR12328169
Sensitive
lineage1.1.1
None
ERR12328175
MDR-TB
lineage1.1.1
None
ERR12328176
MDR-TB
lineage1.1.1;lineage1.2.1.2.1
None
ERR12328178
Sensitive
lineage1.1.1
None
ERR12328184
Other
lineage1.1.1
None
ERR12328191
Sensitive
lineage1.1.1
None
Showing 1 to 10 of 296 entries
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