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SRA data
Rv3854c
- c.-28C>T
Drug resistance types
69 Sensitive
0 RR-TB
6 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.2
75
lineage4.5
2
lineage4.3.4.1
1
lineage4.1.1;lineage4.3.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
79
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13260244
MDR-TB
lineage4.3.2
None
ERR13291225
Sensitive
lineage4.3.2
None
ERR13291514
Sensitive
lineage4.3.2
None
ERR13291669
Sensitive
lineage4.3.2
None
ERR13291969
Sensitive
lineage4.3.2
None
ERR13292299
Sensitive
lineage4.3.2
None
ERR13292311
HR-TB
lineage4.3.2
None
ERR2184288
Sensitive
lineage4.3.2
pe
ERR2184364
Sensitive
lineage4.3.2
pe
ERR2184465
Sensitive
lineage4.3.2
pe
Showing 1 to 10 of 79 entries
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