Rv3854c - c.1109_1147delAGGGCATGATGCTTTCCGGCATCCCCAACATGGCCTACA
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
10 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 15 |
| lineage4.1.1.1 | 15 |
| lineage2.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1163001 | Pre-XDR-TB | lineage4.3.3 | None | SRR1163363 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165693 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1165693 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1165707 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1165707 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1169244 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1169283 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1167358 | MDR-TB | lineage4.1.1.1 | None | SRR1167358 | MDR-TB | lineage4.1.1.1 | None | SRR1169039 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169039 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172044 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172044 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180950 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181131 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165722 | MDR-TB | lineage4.1.1.1 | None | SRR6896343 | MDR-TB | lineage4.1.1.1 | None | SRR6896343 | MDR-TB | lineage4.1.1.1 | None | SRR29772595 | MDR-TB | lineage2.2.1 | None | SRR29772595 | MDR-TB | lineage2.2.1 | None | SAMN02419624 | Pre-XDR-TB | lineage4.3.3 | by | SAMN02419624 | Pre-XDR-TB | lineage4.3.3 | by | SAMN02419572 | Pre-XDR-TB | lineage4.3.3 | by | SAMN02419572 | Pre-XDR-TB | lineage4.3.3 | by | SRR1159290 | Pre-XDR-TB | lineage4.3.3 | None | SRR1162537 | Pre-XDR-TB | lineage4.3.3 | None | SRR1162537 | Pre-XDR-TB | lineage4.3.3 | None | SRR2101307 | MDR-TB | lineage4.1.1.1 | None | SRR2101307 | MDR-TB | lineage4.1.1.1 | None | SAMN02403603 | MDR-TB | lineage4.1.1.1 | za | SAMN02403602 | Pre-XDR-TB | lineage4.1.1.1 | za |
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