Rv3854c - c.1341delC
Drug resistance types
0 Sensitive
1 RR-TB
3 HR-TB
25 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 41 |
| lineage4.1.2.1 | 6 |
| lineage3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8665727 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665968 | Pre-XDR-TB | lineage2.2.1 | None | DRR130069 | Pre-XDR-TB | lineage2.2.1 | None | ERR552955 | MDR-TB | lineage2.2.1 | None | ERR8665726 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458411 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824381 | MDR-TB | lineage2.2.1 | cn | SRR13232578 | Pre-XDR-TB | lineage2.2.1 | None | SRR6256970 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723579 | MDR-TB | lineage2.2.1 | cn | ERR553179_ERR553178 | MDR-TB | lineage2.2.1 | None | ERR6397176 | MDR-TB | lineage4.1.2.1 | None | ERR8665532 | Pre-XDR-TB | lineage2.2.1 | None | SRR29358140 | MDR-TB | lineage4.1.2.1 | None | SRR13232736 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827778 | MDR-TB | lineage2.2.1 | None | ERR5865794 | MDR-TB | lineage2.2.1 | None | SRR29772574 | RR-TB | lineage3 | None | SAMEA2535028 | MDR-TB | lineage2.2.1 | uz | ERR4829778 | HR-TB | lineage4.6.2.2 | None | ERR553178 | MDR-TB | lineage2.2.1 | None | ERR5865793 | MDR-TB | lineage2.2.1 | None | ERR553179 | MDR-TB | lineage2.2.1 | None | SRR29358144 | MDR-TB | lineage4.1.2.1 | None | ERR552956 | MDR-TB | lineage2.2.1 | None | ERR8665807 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277292 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865715 | MDR-TB | lineage2.2.1 | None | ERR8773865 | MDR-TB | lineage2.2.1 | None | ERR11082649 | MDR-TB | lineage4.1.2.1 | None | ERR8665969 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824586 | MDR-TB | lineage2.2.1 | cn | ERR2307477 | MDR-TB | lineage2.2.1 | None | SRR1723776 | MDR-TB | lineage2.2.1 | cn | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR18003016 | Pre-XDR-TB | lineage2.2.1 | None | ERR6397172 | MDR-TB | lineage4.1.2.1 | None | DRR130178 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232584 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232716 | Pre-XDR-TB | lineage2.2.1 | None | SRR21714052 | HR-TB | lineage1.1.3.1 | None | SRR25514935 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773864 | MDR-TB | lineage2.2.1 | None | ERR8665531 | Pre-XDR-TB | lineage2.2.1 | None | ERR552955_ERR552956 | MDR-TB | lineage2.2.1 | None | ERR13258448 | Pre-XDR-TB | lineage2.2.1 | None | ERR108450 | MDR-TB | lineage2.2.1 | ru | SRR13232576 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2535194 | MDR-TB | lineage2.2.1 | uz | SRR13355779 | XDR-TB | lineage2.2.1 | None | ERR11050327 | HR-TB | lineage4.6.2.2 | None |
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