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SRA data
Rv3854c
- c.140delT
Drug resistance types
0 Sensitive
2 RR-TB
8 HR-TB
30 MDR-TB
53 Pre-XDR-TB
9 XDR-TB
20 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
50
lineage3.1.2.1
17
lineage4.1.2.1
10
lineage4.4.1.1.1
10
lineage4.6.1.2
6
lineage2.2.2
4
lineage2.2.1.1
4
lineage4.1.3
3
lineage4.3.4.2
3
lineage4.8
3
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
122
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11488374
MDR-TB
lineage4.3.2
None
ERR1199115
MDR-TB
lineage4.6.1.2
cd
ERR1213893
RR-TB
lineage2.2.1
pe
ERR13284908
MDR-TB
lineage2.2.1
None
ERR13291104
MDR-TB
lineage2.1
None
ERR1654690
MDR-TB
lineage4.6.1.2
None
ERR2510838
Pre-XDR-TB
lineage2.2.1
it
ERR2510845
Pre-XDR-TB
lineage2.2.1
it
ERR2510846
Pre-XDR-TB
lineage2.2.1
it
ERR2513343
HR-TB
lineage4.1.2.1
gb
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