Rv3854c - c.1455C>T
Drug resistance types
4 Sensitive
0 RR-TB
5 HR-TB
36 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 43 |
| lineage4.1;lineage4.4.1.1 | 1 |
| lineage4.4.1.1;lineage4.9 | 1 |
| lineage3.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21689945 | HR-TB | lineage4.4.1.1 | None | SRR3743200 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR7341681 | MDR-TB | lineage4.4.1.1 | None | SRR28646117 | MDR-TB | lineage4.4.1.1 | None | SRR5486904 | MDR-TB | lineage4.4.1.1 | None | SRR7341649 | Pre-XDR-TB | lineage4.4.1.1 | ro | SRR7341684 | MDR-TB | lineage4.4.1.1 | ro | SRR29274194 | MDR-TB | lineage4.1;lineage4.4.1.1 | None | SRR29273766 | MDR-TB | lineage4.4.1.1 | None | ERR9893571 | Sensitive | lineage4.4.1.1;lineage4.9 | None | SRR29096422 | Sensitive | lineage3.1 | None | SRR29273822 | MDR-TB | lineage4.4.1.1 | None | SRR21709843 | MDR-TB | lineage4.4.1.1 | None | ERR3639733 | MDR-TB | lineage4.4.1.1 | None | SRR6650206 | HR-TB | lineage1.1.3.1 | None | SRR7341691 | MDR-TB | lineage4.4.1.1 | ro | SRR7341675 | MDR-TB | lineage4.4.1.1 | ro | SRR7341652 | MDR-TB | lineage4.4.1.1 | ro | SRR7341686 | MDR-TB | lineage4.4.1.1 | ro | SRR7341689 | MDR-TB | lineage4.4.1.1 | ro | SRR7341678 | MDR-TB | lineage4.4.1.1 | ro | SRR7341655 | MDR-TB | lineage4.4.1.1 | ro | SRR29273693 | MDR-TB | lineage4.4.1.1 | None | SRR29096219 | Sensitive | lineage3.1 | None | SRR29274113 | MDR-TB | lineage4.4.1.1 | None | ERR3275730 | HR-TB | lineage4.4.1.1 | nl | SRR7341698 | MDR-TB | lineage4.4.1.1 | ro | SRR7341643 | MDR-TB | lineage4.4.1.1 | ro | SRR7341682 | Pre-XDR-TB | lineage4.4.1.1 | ro | ERR13284128 | MDR-TB | lineage4.4.1.1 | None | ERR11043525 | MDR-TB | lineage4.4.1.1 | None | SRR10525336 | MDR-TB | lineage4.4.1.1 | None | SRR10525328 | MDR-TB | lineage4.4.1.1 | None | ERR1034904 | MDR-TB | lineage4.4.1.1 | pt | SRR7341654 | Pre-XDR-TB | lineage4.4.1.1 | ro | SRR7341699 | MDR-TB | lineage4.4.1.1 | ro | SRR7341651 | MDR-TB | lineage4.4.1.1 | ro | SRR7341703 | MDR-TB | lineage4.4.1.1 | ro | SRR10525338 | MDR-TB | lineage4.4.1.1 | None | ERR1036288 | MDR-TB | lineage4.4.1.1 | pt | SRR29274197 | MDR-TB | lineage4.4.1.1 | None | SRR6397932 | Sensitive | lineage4.4.1.2 | ca | SRR7341671 | MDR-TB | lineage4.4.1.1 | ro | SRR7341685 | MDR-TB | lineage4.4.1.1 | ro | ERR11049032 | HR-TB | lineage4.4.1.1 | None | SRR29273811 | MDR-TB | lineage4.4.1.1 | None | SRR9738538 | MDR-TB | lineage4.4.1.1 | None | SRR7341690 | HR-TB | lineage4.4.1.1 | ro | SRR19573671 | Other | lineage1.2.2.2 | None | SRR7341668 | MDR-TB | lineage4.4.1.1 | ro |
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