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SRA data
Rv3854c
- c.1455C>T
Drug resistance types
4 Sensitive
0 RR-TB
5 HR-TB
51 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.4.1.1
58
lineage3.1
2
lineage1.2.2.2
1
lineage4.1;lineage4.4.1.1
1
lineage1.1.3.1
1
lineage4.4.1.1;lineage4.9
1
lineage4.4.1.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
65
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034904
MDR-TB
lineage4.4.1.1
pt
ERR1036288
MDR-TB
lineage4.4.1.1
pt
ERR11043525
MDR-TB
lineage4.4.1.1
None
ERR11049032
HR-TB
lineage4.4.1.1
None
ERR13284128
MDR-TB
lineage4.4.1.1
None
ERR13291907
MDR-TB
lineage4.4.1.1
None
ERR3275730
HR-TB
lineage4.4.1.1
nl
ERR3639733
MDR-TB
lineage4.4.1.1
None
ERR9893571
Sensitive
lineage4.4.1.1;lineage4.9
None
SRR10525328
MDR-TB
lineage4.4.1.1
None
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