Rv3854c - c.341delA


Drug resistance types
0 Sensitive 7 RR-TB 4 HR-TB 60 MDR-TB 57 Pre-XDR-TB 4 XDR-TB 8 Other
lineage Counts
lineage Count
lineage4.1.3 2
lineage3 8
lineage2.2.1 103
lineage4.1.2.1 4
lineage4.2.1.1 3
lineage2 1
lineage4.7 2
lineage4.3.4.2 1
lineage4.2.2 2
lineage4.3.4.1 5
lineage4 1
lineage4.8.1 2
1
lineage4.3.3;lineage2.2.1 2
lineage1.2.2.2 1
lineage5.1.2 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 140
Geographic prevalence
Country level data for this variant is available for 33 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4818945 Other lineage4.1.3 None
ERR3275507 HR-TB lineage3 nl
SRR5153220 Pre-XDR-TB lineage2.2.1 None
ERR2516950 Pre-XDR-TB lineage2.2.1 gb
ERR2516475 MDR-TB lineage4.1.3 None
ERR2677418 Pre-XDR-TB lineage2.2.1 de
ERR2677467 Pre-XDR-TB lineage2.2.1 de
ERR2517433 HR-TB lineage3 nl
ERR2516981 Pre-XDR-TB lineage2.2.1 gb
ERR3275809 Other lineage2.2.1 nl
ERR2517004 Pre-XDR-TB lineage2.2.1 gb
ERR2517047 Pre-XDR-TB lineage2.2.1 gb
ERR2516798 Pre-XDR-TB lineage2.2.1 gb
ERR2653088 MDR-TB lineage4.1.2.1 None
ERR4827437 Pre-XDR-TB lineage2.2.1 None
ERR2653160 MDR-TB lineage4.1.2.1 None
ERR4827893 MDR-TB lineage2.2.1 None
ERR275215 MDR-TB lineage2.2.1 pt
ERR4830152 Pre-XDR-TB lineage2.2.1 tj
SRR5709784 Other lineage2.2.1 th
SRR5709831 Other lineage2.2.1 th
ERR4830898 MDR-TB lineage2.2.1 None
ERR4830612 MDR-TB lineage2.2.1 tm
ERR4831657 MDR-TB lineage2.2.1 None
SRR6257006 MDR-TB lineage2.2.1 None
SRR6257026 MDR-TB lineage2.2.1 None
ERR4831404 XDR-TB lineage2.2.1 de
ERR4830165 Pre-XDR-TB lineage2.2.1 None
ERR4828777 MDR-TB lineage4.2.1.1 None
ERR4828783 MDR-TB lineage2.2.1 None
SRR6257071 Pre-XDR-TB lineage2.2.1 None
ERR4831196 HR-TB lineage3 de
SRR6832171 Pre-XDR-TB lineage2 None
SRR6831816 MDR-TB lineage2.2.1 None
ERR11067399 Pre-XDR-TB lineage2.2.1 None
SRR6785496 MDR-TB lineage2.2.1 None
SRR7516404 Pre-XDR-TB lineage2.2.1 None
SRR6832440 MDR-TB lineage2.2.1 None
SRR6832755 MDR-TB lineage2.2.1 None
SRR6832829 MDR-TB lineage2.2.1 None
SRR6831732 MDR-TB lineage2.2.1 None
ERR2446119 HR-TB lineage3 nl
SRR7516405 Pre-XDR-TB lineage2.2.1 None
SRR7645907 Pre-XDR-TB lineage2.2.1 None
SRR7755666 Pre-XDR-TB lineage2.2.1 None
SRR7755709 Pre-XDR-TB lineage2.2.1 None
ERR11043389 MDR-TB lineage4.7 None
SRR7765355 MDR-TB lineage4.2.1.1 None
SRR7781500 MDR-TB lineage2.2.1 None
DRR184906 MDR-TB lineage2.2.1 vn
ERR1035245 MDR-TB lineage2.2.1 pt
ERR10762253 MDR-TB lineage2.2.1 None
ERR11042969 Pre-XDR-TB lineage2.2.1 None
ERR11043511 Pre-XDR-TB lineage2.2.1 None
ERR11043693 MDR-TB lineage4.1.2.1 None
ERR11043526 MDR-TB lineage2.2.1 None
ERR11043701 MDR-TB lineage2.2.1 None
ERR11043690 Pre-XDR-TB lineage2.2.1 None
ERR3639746 MDR-TB lineage2.2.1 None
ERR3287497 Pre-XDR-TB lineage4.3.4.2 pe
ERR4796458 MDR-TB lineage3 in
ERR4276867 XDR-TB lineage2.2.1 None
ERR4276868 XDR-TB lineage2.2.1 None
ERR4796868 MDR-TB lineage3 in
ERR4799388 Pre-XDR-TB lineage2.2.1 in
ERR4797557 MDR-TB lineage3 in
ERR4811161 Pre-XDR-TB lineage4.2.2 cn
ERR4799647 Pre-XDR-TB lineage2.2.1 in
ERR4800253 MDR-TB lineage3 in
ERR5864890 MDR-TB lineage2.2.1 None
ERR4811362 Pre-XDR-TB lineage4.2.2 cn
ERR5864889 MDR-TB lineage2.2.1 None
ERR5864888 MDR-TB lineage2.2.1 None
ERR5865964 MDR-TB lineage2.2.1 None
ERR5865800 MDR-TB lineage2.2.1 None
ERR5865871 Pre-XDR-TB lineage2.2.1 None
ERR5865872 Pre-XDR-TB lineage2.2.1 None
ERR5865946 MDR-TB lineage2.2.1 None
ERR5865799 MDR-TB lineage2.2.1 None
ERR5865947 MDR-TB lineage2.2.1 None
ERR5865948 MDR-TB lineage2.2.1 None
ERR7362020 MDR-TB lineage2.2.1 None
ERR5866011 Pre-XDR-TB lineage2.2.1 None
ERR5866113 MDR-TB lineage2.2.1 None
ERR5866313 Pre-XDR-TB lineage2.2.1 None
ERR718432 Other lineage2.2.1 th
ERR5866114 MDR-TB lineage2.2.1 None
ERR5866311 Pre-XDR-TB lineage2.2.1 None
ERR5866312 Pre-XDR-TB lineage2.2.1 None
ERR7737709 MDR-TB lineage2.2.1 None
ERR8665526 Pre-XDR-TB lineage2.2.1 None
ERR7911226 Pre-XDR-TB lineage2.2.1 md
ERR7911313 MDR-TB lineage2.2.1 vn
ERR7975659 MDR-TB lineage2.2.1 None
ERR7975649 Pre-XDR-TB lineage2.2.1 None
ERR8774586 MDR-TB lineage2.2.1 None
ERR8665722 Pre-XDR-TB lineage2.2.1 None
ERR8665723 Pre-XDR-TB lineage2.2.1 None
ERR973455 RR-TB lineage4.3.4.1 None
ERR9027228 Pre-XDR-TB lineage2.2.1 None
ERR973453 RR-TB lineage4.3.4.1 None
ERR9896169 Other lineage2.2.1 None
ERR973456 RR-TB lineage4.3.4.1 None
ERR973454 RR-TB lineage4.3.4.1 None
ERR973458 RR-TB lineage4 None
ERR973457 RR-TB lineage4.3.4.1 None
ERR11050135 Pre-XDR-TB lineage2.2.1 None
ERR9901825 Other lineage2.2.1 None
ERR9907685 MDR-TB lineage4.8.1 None
ERR9907755 Pre-XDR-TB lineage4.8.1 None
SRR10397210 MDR-TB lineage2.2.1 None
SRR11972311 Pre-XDR-TB None
SRR13232458 MDR-TB lineage4.3.3;lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR13232456 MDR-TB lineage4.3.3;lineage2.2.1 None
SRR14782520 Pre-XDR-TB lineage2.2.1 None
SRR13232657 MDR-TB lineage2.2.1 None
SRR13232697 Pre-XDR-TB lineage2.2.1 None
SRR1577806 MDR-TB lineage2.2.1 None
SRR14807627 XDR-TB lineage2.2.1 None
SRR1577830 MDR-TB lineage2.2.1 None
SRR14801310 MDR-TB lineage2.2.1 None
SRR18714834 Pre-XDR-TB lineage2.2.1 None
SRR16088264 Pre-XDR-TB lineage2.2.1 None
SRR18715490 Pre-XDR-TB lineage2.2.1 None
SRR18714956 Pre-XDR-TB lineage2.2.1 None
SRR18715081 Pre-XDR-TB lineage2.2.1 None
SRR18715077 MDR-TB lineage2.2.1 None
SRR18715441 MDR-TB lineage5.1.2 None
SRR20970010 Pre-XDR-TB lineage2.2.1 None
ERR158602 Pre-XDR-TB lineage2.2.1 gb
ERR11069124 Pre-XDR-TB lineage2.2.1 None
ERR11081269 MDR-TB lineage4.7 None
ERR11243549 Pre-XDR-TB lineage2.2 None
SRR21887655 Pre-XDR-TB lineage2.2.1 None
ERR11081826 RR-TB lineage4.1.2.1 None
ERR11243547 Pre-XDR-TB lineage2.2.1 None
ERR11243548 Pre-XDR-TB lineage2.2.1 None
SRR3085317 MDR-TB lineage4.2.1.1 None
SRR3675220 Pre-XDR-TB lineage2.2.1 None