Rv3854c - c.341delA


Drug resistance types
0 Sensitive 5 RR-TB 7 HR-TB 90 MDR-TB 77 Pre-XDR-TB 6 XDR-TB 15 Other
lineage Counts
lineage Count
lineage3 9
lineage2.2.1 164
lineage4.9 1
lineage4.3.4.2 1
lineage4.3.4.1 4
lineage4.2.2 3
lineage2.2.1;lineage4.8 2
lineage4.1.2.1 4
lineage4.8 4
lineage2.2.1;lineage4.3.3 2
lineage4.8.1 2
lineage1.2.2.2 1
lineage5.1.2 1
lineage4.7 2
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 31 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796868 MDR-TB lineage3 in
ERR5866311 Pre-XDR-TB lineage2.2.1 None
SRR6257006 MDR-TB lineage2.2.1 None
ERR8665722 Pre-XDR-TB lineage2.2.1 None
SRR7534980 Other lineage4.9 None
SRR23310922 HR-TB lineage2.2.1 None
SRR6832755 MDR-TB lineage2.2.1 None
SRR6832829 MDR-TB lineage2.2.1 None
ERR3287497 Pre-XDR-TB lineage4.3.4.2 pe
SRR10397210 MDR-TB lineage2.2.1 None
ERR2600462 MDR-TB lineage2.2.1 None
ERR9896169 Other lineage2.2.1 None
SRR14807627 XDR-TB lineage2.2.1 None
ERR973453 RR-TB lineage4.3.4.1 None
ERR4811161 Pre-XDR-TB lineage4.2.2 cn
SRR22251796 Other lineage2.2.1 None
ERR11043526 MDR-TB lineage2.2.1 None
ERR552127 MDR-TB lineage2.2.1 None
SRR11662553 MDR-TB lineage2.2.1 None
ERR7737709 MDR-TB lineage2.2.1 None
ERR11243549 Pre-XDR-TB lineage2.2.1 None
ERR551162 MDR-TB lineage2.2.1 None
SRR24255949 MDR-TB lineage2.2.1 None
DRR184906 MDR-TB lineage2.2.1 vn
ERR4276867 XDR-TB lineage2.2.1 None
SRR24256366 Pre-XDR-TB lineage2.2.1 None
ERR552847 MDR-TB lineage2.2.1 None
SRR3724945 Other lineage2.2.1 None
ERR552453 MDR-TB lineage2.2.1 None
SRR25827532 Pre-XDR-TB lineage2.2.1 None
ERR4827437 HR-TB lineage2.2.1 None
ERR2307781 MDR-TB lineage2.2.1 None
SRR7645907 Pre-XDR-TB lineage2.2.1 None
SRR1577830 MDR-TB lineage2.2.1 None
ERR4799647 Pre-XDR-TB lineage2.2.1 in
ERR2600593 MDR-TB lineage2.2.1 None
ERR5866011 Pre-XDR-TB lineage2.2.1 None
SRR7516405 Pre-XDR-TB lineage2.2.1 None
ERR2600586 MDR-TB lineage2.2.1 None
ERR11042969 Pre-XDR-TB lineage2.2.1 None
ERR11050135 Pre-XDR-TB lineage2.2.1 None
SRR25827672 Pre-XDR-TB lineage2.2.1 None
SRR7781500 MDR-TB lineage2.2.1 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
SRR11662418 MDR-TB lineage2.2.1 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
SRR21691120 Other lineage2.2.1 None
SRR23340151 MDR-TB lineage2.2.1 None
SRR24256186 Pre-XDR-TB lineage2.2.1 None
ERR553011 MDR-TB lineage2.2.1 None
ERR11043693 MDR-TB lineage4.1.2.1 None
ERR5865946 MDR-TB lineage2.2.1 None
ERR11488412 Pre-XDR-TB lineage4.8 None
SRR24255914 Pre-XDR-TB lineage2.2.1 None
ERR973456 RR-TB lineage4.3.4.1 None
ERR9901825 Other lineage2.2.1 None
ERR4830898 MDR-TB lineage2.2.1 None
SRR5709784 Other lineage2.2.1 th
ERR7911226 Pre-XDR-TB lineage2.2.1 md
SRR21732489 Other lineage2.2.1 None
ERR2517047 Pre-XDR-TB lineage2.2.1 gb
SRR24255883 MDR-TB lineage2.2.1 None
ERR2600464 MDR-TB lineage2.2.1 None
ERR4830165 Pre-XDR-TB lineage2.2.1 None
SRR7516404 Pre-XDR-TB lineage2.2.1 None
SRR13232458 MDR-TB lineage2.2.1;lineage4.3.3 None
SRR24255950 MDR-TB lineage2.2.1 None
ERR550625 MDR-TB lineage2.2.1 None
ERR4276868 XDR-TB lineage2.2.1 None
ERR553027 MDR-TB lineage2.2.1 None
ERR5866312 Pre-XDR-TB lineage2.2.1 None
ERR3639746 MDR-TB lineage2.2.1 None
ERR8665526 Pre-XDR-TB lineage2.2.1 None
ERR2600584 Pre-XDR-TB lineage2.2.1 None
ERR5866113 MDR-TB lineage2.2.1 None
ERR8665723 Pre-XDR-TB lineage2.2.1 None
SRR18714834 Pre-XDR-TB lineage2.2.1 None
ERR11067399 Pre-XDR-TB lineage2.2.1 None
SRR11662199 MDR-TB lineage2.2.1 None
SRR11662670 Pre-XDR-TB lineage2.2.1 None
ERR3275507 HR-TB lineage3 nl
ERR2307785 MDR-TB lineage2.2.1 None
ERR2516798 Pre-XDR-TB lineage2.2.1 gb
ERR11243547 Pre-XDR-TB lineage2.2.1 None
ERR10762253 MDR-TB lineage2.2.1 None
SRR14782520 Pre-XDR-TB lineage2.2.1 None
SRR16088264 Pre-XDR-TB lineage2.2.1 None
ERR4797557 MDR-TB lineage3 in
ERR2600422 MDR-TB lineage2.2.1 None
SRR5153220 Pre-XDR-TB lineage2.2.1 None
SRR16088336 Pre-XDR-TB lineage2.2.1 None
SRR18715077 MDR-TB lineage2.2.1 None
ERR11488550 Pre-XDR-TB lineage4.8 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
SRR21887655 Pre-XDR-TB lineage2.2.1 None
SRR6257071 Pre-XDR-TB lineage2.2.1 None
SRR5709831 Other lineage2.2.1 th
ERR158602 Pre-XDR-TB lineage2.2.1 gb
ERR9907685 MDR-TB lineage4.8.1 None
ERR2600600 MDR-TB lineage2.2.1 None
ERR9907755 Pre-XDR-TB lineage4.8.1 None
SRR7755666 Pre-XDR-TB lineage2.2.1 None
ERR2307488 HR-TB lineage2.2.1 None
SRR20970010 Pre-XDR-TB lineage2.2.1 None
ERR5866114 MDR-TB lineage2.2.1 None
SRR13232456 MDR-TB lineage2.2.1;lineage4.3.3 None
ERR11774907 Pre-XDR-TB lineage2.2.1 None
ERR11773816 Pre-XDR-TB lineage2.2.1 None
ERR11774905 Pre-XDR-TB lineage2.2.1 None
SRR28434985 MDR-TB lineage2.2.1 None
SRR25207082 Pre-XDR-TB lineage4.2.2 None
ERR2600592 Pre-XDR-TB lineage2.2.1 None
ERR4828783 MDR-TB lineage2.2.1 None
ERR9027228 Pre-XDR-TB lineage2.2.1 None
ERR2653088 MDR-TB lineage4.1.2.1 None
ERR7911313 MDR-TB lineage2.2.1 vn
ERR11798528 MDR-TB lineage2.2.1 None
ERR4831196 HR-TB lineage3 de
ERR2600566 Pre-XDR-TB lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR6785496 MDR-TB lineage2.2.1 None
SRR21690393 Other lineage2.2.1 None
ERR4827893 MDR-TB lineage2.2.1 None
ERR11069124 Pre-XDR-TB lineage2.2.1 None
ERR4830612 MDR-TB lineage2.2.1 tm
ERR2517433 HR-TB lineage3 nl
SRR18715441 MDR-TB lineage5.1.2 None
ERR2516950 Pre-XDR-TB lineage2.2.1 gb
SRR24256313 MDR-TB lineage2.2.1 None
ERR2307771 MDR-TB lineage2.2.1 None
ERR11081269 MDR-TB lineage4.7 None
ERR2516981 Pre-XDR-TB lineage2.2.1 gb
SRR24255908 MDR-TB lineage2.2.1 None
ERR551746 MDR-TB lineage2.2.1 None
SRR6832440 MDR-TB lineage2.2.1 None
ERR2307634 Pre-XDR-TB lineage2.2.1 None
SRR23316631 Other lineage2.2.1 None
ERR5865872 Pre-XDR-TB lineage2.2.1 None
ERR551788 MDR-TB lineage2.2.1 None
ERR5865871 Pre-XDR-TB lineage2.2.1 None
SRR18715490 Pre-XDR-TB lineage2.2.1 None
ERR7975659 MDR-TB lineage2.2.1 None
ERR973457 RR-TB lineage4.3.4.1 None
SRR24256093 Pre-XDR-TB lineage2.2.1 None
SRR24256129 MDR-TB lineage2.2.1 None
ERR2307369 MDR-TB lineage2.2.1 None
ERR4796458 MDR-TB lineage3 in
ERR7975649 Pre-XDR-TB lineage2.2.1 None
ERR5865948 MDR-TB lineage2.2.1 None
ERR4811362 Pre-XDR-TB lineage4.2.2 cn
ERR2446119 HR-TB lineage3 nl
SRR13232697 Pre-XDR-TB lineage2.2.1 None
ERR11043389 MDR-TB lineage4.7 None
ERR2677418 Pre-XDR-TB lineage2.2.1 de
SRR24256035 Pre-XDR-TB lineage2.2.1 None
ERR11043511 Pre-XDR-TB lineage2.2.1 None
ERR5864888 MDR-TB lineage2.2.1 None
ERR2307774 MDR-TB lineage2.2.1 None
SRR25207307 Pre-XDR-TB lineage2.2.1 None
SRR24255938 XDR-TB lineage2.2.1 None
SRR18714956 Pre-XDR-TB lineage2.2.1 None
ERR4831404 XDR-TB lineage2.2.1 de
ERR7362020 MDR-TB lineage2.2.1 None
SRR6831732 MDR-TB lineage2.2.1 None
SRR18715081 Pre-XDR-TB lineage2.2.1 None
ERR5865964 MDR-TB lineage2.2.1 None
ERR3275809 Other lineage2.2.1 nl
ERR2653160 MDR-TB lineage4.1.2.1 None
SRR24256174 Pre-XDR-TB lineage2.2.1 None
ERR5865800 MDR-TB lineage2.2.1 None
ERR275215 MDR-TB lineage2.2.1 pt
ERR8774586 MDR-TB lineage2.2.1 None
ERR551647 MDR-TB lineage2.2.1 None
ERR11488640 MDR-TB lineage4.8 None
ERR5864889 MDR-TB lineage2.2.1 None
SRR28351538 MDR-TB lineage3 None
SRR28498382 XDR-TB lineage2.2.1 None
ERR12796616 Pre-XDR-TB lineage2.2.1 None
ERR2600561 Other lineage2.2.1;lineage4.8 None
ERR1035245 MDR-TB lineage2.2.1 pt
ERR2600448 Pre-XDR-TB lineage2.2.1 None
SRR7755709 Pre-XDR-TB lineage2.2.1 None
SRR26937148 MDR-TB lineage2.2.1 None
ERR2600463 MDR-TB lineage2.2.1 None
ERR5864890 MDR-TB lineage2.2.1 None
SRR14801310 MDR-TB lineage2.2.1 None
ERR4800253 MDR-TB lineage3 in
SRR24709926 MDR-TB lineage2.2.1 None
SRR3675220 Pre-XDR-TB lineage2.2.1 None
ERR11081826 RR-TB lineage4.1.2.1 None
SRR6831816 MDR-TB lineage2.2.1 None
ERR11243548 Pre-XDR-TB lineage2.2.1 None
ERR973455 RR-TB lineage4.3.4.1 None
ERR11488642 Pre-XDR-TB lineage4.8 None
ERR11043690 Pre-XDR-TB lineage2.2.1 None
ERR5865947 MDR-TB lineage2.2.1 None
ERR2517004 Pre-XDR-TB lineage2.2.1 gb
SRR13232657 MDR-TB lineage2.2.1 None
ERR4799388 Pre-XDR-TB lineage2.2.1 in
ERR718432 Other lineage2.2.1 th