Rv3854c - c.479delC
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
19 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 42 |
| lineage4.8 | 2 |
| lineage1.1.2 | 1 |
| lineage4.9 | 3 |
| lineage4.4.2 | 2 |
| lineage4.1.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR403232 | HR-TB | lineage2.2.1 | None | SRR5486888 | Pre-XDR-TB | lineage4.8 | None | ERR13284250 | MDR-TB | lineage2.2.1 | None | ERR144554 | MDR-TB | lineage2.2.1 | ru | ERR5865767 | MDR-TB | lineage2.2.1 | None | ERR234643 | Pre-XDR-TB | lineage2.2.1 | ru | SRR4034742 | Other | lineage2.2.1 | za | SRR4034740 | Other | lineage2.2.1 | za | ERR228024 | MDR-TB | lineage2.2.1 | ru | SRR7592359 | Pre-XDR-TB | lineage4.8 | None | SRR4034743 | Other | lineage2.2.1 | za | ERR4797133 | MDR-TB | lineage1.1.2 | in | SRR4034745 | Other | lineage2.2.1 | za | DRR130118 | Pre-XDR-TB | lineage4.9 | None | ERR13254202 | Pre-XDR-TB | lineage4.9 | None | SRR4034738 | Other | lineage2.2.1 | za | ERR137221 | HR-TB | lineage2.2.1 | ru | SRR4034741 | Other | lineage2.2.1 | za | ERR019553 | MDR-TB | lineage2.2.1 | None | ERR5865766 | MDR-TB | lineage2.2.1 | None | SRR4034746 | Other | lineage2.2.1 | za | SRR4034744 | Other | lineage2.2.1 | za | SRR1723994 | Pre-XDR-TB | lineage4.4.2 | cn | SRR5486872 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2179657 | Pre-XDR-TB | lineage4.4.2 | cn | SRR23861829 | MDR-TB | lineage2.2.1 | None | ERR11043461 | MDR-TB | lineage2.2.1 | None | ERR144601 | Pre-XDR-TB | lineage2.2.1 | ru | SRR10525363 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7646062 | Other | lineage2.2.1 | None | SRR29914434 | Pre-XDR-TB | lineage2.2.1 | None | ERR234670 | MDR-TB | lineage2.2.1 | None | ERR403324 | MDR-TB | lineage2.2.1 | None | ERR4799880 | Pre-XDR-TB | lineage2.2.1 | in | ERR229968 | Pre-XDR-TB | lineage2.2.1 | ru | ERR227981 | MDR-TB | lineage2.2.1 | ru | ERR158596 | Pre-XDR-TB | lineage2.2.1 | ru | ERR137264 | Pre-XDR-TB | lineage2.2.1 | ru | ERR137229 | Pre-XDR-TB | lineage2.2.1 | ru | ERR067714 | MDR-TB | lineage2.2.1 | ru | ERR229971 | MDR-TB | lineage2.2.1 | ru | ERR229915 | MDR-TB | lineage2.2.1 | ru | ERR144634 | MDR-TB | lineage2.2.1 | ru | ERR227975 | MDR-TB | lineage2.2.1 | ru | ERR067625 | MDR-TB | lineage2.2.1 | ru | ERR133890 | Pre-XDR-TB | lineage2.2.1 | ru | ERR234692 | MDR-TB | lineage2.2.1 | ru | ERR133896 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4797438 | Pre-XDR-TB | lineage2.2.1 | in | SRR4034739 | Other | lineage2.2.1 | za | ERR403235 | HR-TB | lineage2.2.1 | None | ERR4822359 | Pre-XDR-TB | lineage4.9 | None |
|---|
