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SRA data
Rv3854c
- c.754_755dupGC
Drug resistance types
0 Sensitive
22 RR-TB
3 HR-TB
72 MDR-TB
65 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
40
lineage4.3.3
29
lineage3
20
lineage4.8
19
lineage4.1.1.3
13
lineage2.2.1.1
6
lineage4.3.2
5
lineage4.6.1.2
5
lineage4.8.1
5
lineage4
4
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
165
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130145
Pre-XDR-TB
lineage2.2.1
None
DRR130213
Pre-XDR-TB
lineage2.2.1
None
ERR1034703
MDR-TB
lineage4.3.3
pe
ERR13258452
Pre-XDR-TB
lineage2.2.1
None
ERR13264938
Pre-XDR-TB
lineage3
None
ERR13266700
Pre-XDR-TB
lineage2.2.1.1
None
ERR13266853
Pre-XDR-TB
lineage2.2.1.1
None
ERR13267053
Pre-XDR-TB
lineage2.2.1
None
ERR13267494
MDR-TB
lineage4.5
None
ERR13288749
RR-TB
lineage2.2.1
None
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