TB-Profiler
Home
Upload
SRA data
Rv3854c
- c.776_777dupGC
Drug resistance types
0 Sensitive
1 RR-TB
0 HR-TB
5 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.1.2.1
2
lineage4.3.3
2
lineage2.2.1
2
lineage2.2.1;lineage3
1
lineage4.1.2.1.1
1
lineage3
1
lineage2.2.2
1
lineage2.2.1.1
1
Showing 1 to 8 of 8 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
11
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11552004
MDR-TB
lineage4.1.2.1
None
ERR11552009
MDR-TB
lineage4.1.2.1
None
ERR13261214
XDR-TB
lineage2.2.1.1
None
ERR13291055
RR-TB
lineage2.2.2
None
ERR4798080
MDR-TB
lineage2.2.1
in
ERR4799663
Pre-XDR-TB
lineage2.2.1;lineage3
in
ERR4813670
MDR-TB
lineage4.3.3
None
ERR760925
MDR-TB
lineage4.1.2.1.1
ar
ERR8665901
Pre-XDR-TB
lineage4.3.3
None
SRR28351328
Pre-XDR-TB
lineage3
None
Showing 1 to 10 of 11 entries
Previous
1
2
Next