Rv3854c - c.825dupG
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
37 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 14 |
| lineage4.3.3 | 14 |
| lineage2.2.1 | 20 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1165339 | MDR-TB | lineage2.2.2 | None | SRR1167276 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165698 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165222 | MDR-TB | lineage2.2.2 | None | SRR1165690 | MDR-TB | lineage2.2.1 | None | SAMN02403572 | MDR-TB | lineage4.3.3 | za | SRR1165259 | MDR-TB | lineage2.2.2 | None | SRR1165279 | Pre-XDR-TB | lineage2.2.2 | None | ERR3324371 | MDR-TB | lineage2.2.1 | None | SRR1165250 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165262 | MDR-TB | lineage2.2.2 | None | SRR1165274 | MDR-TB | lineage4.1.1.3 | None | SRR1165662 | MDR-TB | lineage4.3.3 | None | ERR3324337 | MDR-TB | lineage2.2.1 | None | SRR1159279 | MDR-TB | lineage2.2.1 | None | SRR1167319 | MDR-TB | lineage2.2.2 | None | SRR1167321 | MDR-TB | lineage4.3.2 | None | SRR1172073 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1165710 | MDR-TB | lineage4.3.3 | None | SRR1167373 | MDR-TB | lineage4.3.3 | None | SAMN02403604 | MDR-TB | lineage4.3.3 | za | SRR1167312 | MDR-TB | lineage4.4.1.1.1 | None | ERR4822382 | Pre-XDR-TB | lineage2.2.1 | kg | ERR550945 | HR-TB | lineage2.2.1 | None | ERR550947 | HR-TB | lineage2.2.1 | None | SRR1167181 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403570 | MDR-TB | lineage4.3.3 | za | SRR5817478 | MDR-TB | lineage2.2.2 | au | SRR25389433 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165215 | MDR-TB | lineage2.2.2 | None | SRR25389434 | Pre-XDR-TB | lineage2.2.1 | None | ERR550946 | HR-TB | lineage2.2.1 | None | SRR1167372 | MDR-TB | lineage2.2.1 | None | SRR1167335 | MDR-TB | lineage4.3.3 | None | SRR1167184 | Pre-XDR-TB | lineage2.2.2 | None | SAMEA2533583 | HR-TB | lineage2.2.1 | pg | ERR7737767 | MDR-TB | lineage2.2.2 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR1167253 | MDR-TB | lineage2.2.2 | None | SRR1165264 | MDR-TB | lineage2.2.1 | None | SRR1165639 | MDR-TB | lineage4.3.4.2.1 | None | ERR4796751 | MDR-TB | lineage2.2.1 | in | ERR3324328 | MDR-TB | lineage2.2.1 | None | SRR1165716 | MDR-TB | lineage4.3.3 | None | ERR11068969 | MDR-TB | lineage2.2.1 | None | SRR1165245 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165278 | MDR-TB | lineage4.3.2 | None | SRR1165682 | MDR-TB | lineage4.3.3 | None | SAMN02403573 | MDR-TB | lineage4.3.3 | za | SRR1165700 | MDR-TB | lineage4.3.3 | None | SRR29538984 | MDR-TB | lineage2.2.1 | None | SRR29539353 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389432 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167185 | Pre-XDR-TB | lineage4.3.3 | None | SRR3105770 | XDR-TB | lineage3 | None | SRR1165225 | Pre-XDR-TB | lineage4.3.3 | None |
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