Rv3854c - c.884delT


Drug resistance types
0 Sensitive 0 RR-TB 0 HR-TB 62 MDR-TB 52 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 110
lineage1.1.2 1
lineage4.2.1;lineage2.2.1 1
lineage2.2 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 114
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18714918 MDR-TB lineage2.2.1 None
SRR18715061 MDR-TB lineage2.2.1 None
SRR18714928 Pre-XDR-TB lineage2.2.1 None
SRR18714917 MDR-TB lineage2.2.1 None
SRR18714964 Pre-XDR-TB lineage2.2.1 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR18715256 MDR-TB lineage2.2.1 None
SRR18715312 MDR-TB lineage2.2.1 None
SRR18715328 Pre-XDR-TB lineage2.2.1 None
SRR18715084 Pre-XDR-TB lineage2.2.1 None
SRR22048397 MDR-TB lineage2.2.1 None
SRR2100227 Pre-XDR-TB lineage2.2.1 None
SRR21736366 MDR-TB lineage2.2.1 None
ERR11068264 Pre-XDR-TB lineage2.2.1 None
ERR11068175 MDR-TB lineage2.2.1 None
ERR11081597 Pre-XDR-TB lineage2.2.1 None
ERR11068581 MDR-TB lineage1.1.2 None
ERR11068497 Pre-XDR-TB lineage2.2.1 None
ERR11068835 MDR-TB lineage2.2.1 None
SAMN02628526 MDR-TB lineage2.2.1 ir
ERR11082648 Pre-XDR-TB lineage2.2.1 None
SRR23938588 MDR-TB lineage2.2.1 None
SRR21887741 Pre-XDR-TB lineage2.2.1 None
ERR2677387 Pre-XDR-TB lineage2.2.1 de
ERR2509884 MDR-TB lineage2.2.1 gb
ERR4827983 Pre-XDR-TB lineage2.2.1 None
ERR4822412 MDR-TB lineage2.2.1 ua
ERR4827418 MDR-TB lineage2.2.1 None
ERR4827736 MDR-TB lineage2.2.1 None
ERR4827924 MDR-TB lineage2.2.1 None
ERR4828012 MDR-TB lineage2.2.1 None
ERR4827787 Pre-XDR-TB lineage2.2.1 None
ERR2864228 MDR-TB lineage2.2.1 pt
ERR4822339 Pre-XDR-TB lineage2.2.1 de
ERR2864255 MDR-TB lineage2.2.1 pt
ERR2864238 MDR-TB lineage2.2.1 pt
ERR4828046 MDR-TB lineage2.2.1 None
ERR4828108 MDR-TB lineage2.2.1 None
ERR4828050 MDR-TB lineage2.2.1 None
ERR4829381 MDR-TB lineage2.2.1 it
ERR4830131 MDR-TB lineage2.2.1 None
ERR4830897 MDR-TB lineage2.2.1 None
ERR4830067 MDR-TB lineage2.2.1 None
SRR6831912 MDR-TB lineage2.2.1 None
ERR4863406 Pre-XDR-TB lineage2.2.1 None
ERR4829831 MDR-TB lineage4.2.1;lineage2.2.1 it
SRR6511591 MDR-TB lineage2.2.1 None
SRR6831899 MDR-TB lineage2.2.1 None
SRR6832434 Pre-XDR-TB lineage2.2.1 None
SRR6831918 MDR-TB lineage2.2.1 None
SRR6831995 MDR-TB lineage2.2.1 None
SRR6832031 MDR-TB lineage2.2.1 None
SRR6832063 MDR-TB lineage2.2.1 None
SRR6832097 MDR-TB lineage2.2.1 None
SRR6832135 MDR-TB lineage2.2.1 None
SRR6832412 MDR-TB lineage2.2.1 None
SRR6832460 MDR-TB lineage2.2.1 None
SRR8651562 Pre-XDR-TB lineage2.2.1 cn
SRR6832735 MDR-TB lineage2.2.1 None
SAMEA2534612 MDR-TB lineage2.2.1 uz
SRR6832788 MDR-TB lineage2.2.1 None
SRR6831773 MDR-TB lineage2.2.1 None
ERR019865 MDR-TB lineage2.2 None
ERR017791 MDR-TB lineage2.2.1 None
ERR1034819 MDR-TB lineage2.2.1 pt
ERR11044156 Pre-XDR-TB lineage2.2.1 None
ERR11044112 Pre-XDR-TB lineage2.2.1 None
ERR11044161 Pre-XDR-TB lineage2.2.1 None
ERR1034838 MDR-TB lineage2.2.1 pt
ERR10762313 MDR-TB lineage2.2.1 None
ERR11044092 Pre-XDR-TB lineage2.2.1 None
ERR11044096 Pre-XDR-TB lineage2.2.1 None
ERR11044128 Pre-XDR-TB lineage2.2.1 None
ERR5864470 Pre-XDR-TB lineage2.2.1 None
ERR117663 Pre-XDR-TB lineage2.2.1 None
ERR4276878 MDR-TB lineage2.2.1 None
ERR5864468 Pre-XDR-TB lineage2.2.1 None
ERR5864472 Pre-XDR-TB lineage2.2.1 None
ERR5864471 Pre-XDR-TB lineage2.2.1 None
ERR5864473 Pre-XDR-TB lineage2.2.1 None
ERR5864469 Pre-XDR-TB lineage2.2.1 None
ERR5865159 Pre-XDR-TB lineage2.2.1 None
ERR5865309 Pre-XDR-TB lineage2.2.1 None
ERR5865160 Pre-XDR-TB lineage2.2.1 None
ERR5865161 Pre-XDR-TB lineage2.2.1 None
ERR5865308 Pre-XDR-TB lineage2.2.1 None
ERR5865310 Pre-XDR-TB lineage2.2.1 None
ERR5865311 Pre-XDR-TB lineage2.2.1 None
ERR5866084 MDR-TB lineage2.2.1 None
ERR5865740 MDR-TB lineage2.2.1 None
ERR5866085 MDR-TB lineage2.2.1 None
ERR5866355 Pre-XDR-TB lineage2.2.1 None
ERR5866354 Pre-XDR-TB lineage2.2.1 None
ERR9027234 Pre-XDR-TB lineage2.2.1 None
ERR5866356 Pre-XDR-TB lineage2.2.1 None
SRR11567806 Pre-XDR-TB lineage2.2.1 None
SRR11567805 Pre-XDR-TB lineage2.2.1 None
SRR1172183 MDR-TB lineage2.2.1 None
SRR14782230 MDR-TB lineage2.2.1 None
SRR1172288 MDR-TB lineage2.2.1 None
SRR13120447 MDR-TB lineage2.2.1 None
SRR13243562 Pre-XDR-TB lineage2.2.1 None
SRR13243566 Pre-XDR-TB lineage2.2.1 None
SRR1180141 MDR-TB lineage2.2.1 None
SRR1183064 MDR-TB lineage2.2.1 None
SRR11972394 Pre-XDR-TB lineage2.2.1.1 None
SRR13232546 Pre-XDR-TB lineage2.2.1 None
SRR14801766 MDR-TB lineage2.2.1 None
SRR14801860 MDR-TB lineage2.2.1 None
SRR14802170 Pre-XDR-TB lineage2.2.1 None
SRR14807542 Pre-XDR-TB lineage2.2.1 None
SRR14802168 Pre-XDR-TB lineage2.2.1 None
SRR16087916 Pre-XDR-TB lineage2.2.1 None
SRR16088064 Pre-XDR-TB lineage2.2.1 None