Rv3854c - p.Gln254Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
9 Sensitive
0 RR-TB
3 HR-TB
57 MDR-TB
42 Pre-XDR-TB
2 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 82 |
| lineage3 | 13 |
| lineage2.2.2 | 4 |
| lineage2.2.1.1 | 4 |
| lineage4.3.3 | 4 |
| lineage1.1.1 | 1 |
| 2 | |
| lineage4.1.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10147690 | MDR-TB | lineage2.2.1 | None | ERR4423531 | Other | lineage2.2.1 | None | SRR4423167 | Pre-XDR-TB | lineage3 | None | SRR25207084 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096574 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025420 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539509 | Pre-XDR-TB | lineage2.2.1 | None | SRR10147693 | MDR-TB | lineage2.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863693 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743497 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865289 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832565 | MDR-TB | lineage2.2.1 | None | SRR29289356 | Sensitive | lineage3 | None | SRR29093804 | MDR-TB | lineage2.2.1 | None | ERR4797387 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799907 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5865729 | MDR-TB | lineage2.2.1 | None | ERR4195457 | MDR-TB | lineage2.2.1 | None | ERR13195559 | MDR-TB | lineage2.2.2 | None | ERR7911548 | Pre-XDR-TB | lineage2.2.1 | za | ERR4830752 | MDR-TB | lineage2.2.1 | ir | ERR7911733 | MDR-TB | lineage2.2.1 | us | ERR5866230 | MDR-TB | lineage2.2.1 | None | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2516644 | MDR-TB | lineage2.2.1 | pe | SRR5709916 | MDR-TB | lineage1.1.1 | th | SRR6046888 | MDR-TB | lineage3 | gb | SRR6824327 | Pre-XDR-TB | lineage2.2.1 | cn | SRR20632820 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153315 | MDR-TB | lineage4.3.3 | None | SRR29017549 | Pre-XDR-TB | lineage3 | None | SRR10397120 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096400 | Sensitive | lineage3 | None | ERR4817208 | MDR-TB | lineage2.2.1 | gb | ERR13286097 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286117 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818911 | MDR-TB | lineage2.2.1 | gb | ERR4830774 | MDR-TB | lineage2.2.1 | ir | ERR5866106 | MDR-TB | lineage2.2.1 | None | SRR28044374 | Sensitive | lineage3 | None | SRR1723807 | MDR-TB | lineage2.2.1 | cn | SRR23691419 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29096481 | MDR-TB | lineage2.2.1 | None | SRR29356788 | MDR-TB | lineage2.2.1 | None | SRR29356767 | MDR-TB | lineage2.2.1 | None | ERR5865730 | MDR-TB | lineage2.2.1 | None | SRR10147678 | MDR-TB | lineage2.2.1 | None | ERR13289721 | MDR-TB | lineage3 | None | ERR4553678 | MDR-TB | None | SRR29093628 | MDR-TB | lineage2.2.1 | None | ERR13262056 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28351536 | Pre-XDR-TB | lineage3 | None | ERR5866229 | MDR-TB | lineage2.2.1 | None | SRR28467068 | MDR-TB | lineage2.2.1 | None | ERR775373 | MDR-TB | lineage2.2.1 | pe | SRR2024939 | MDR-TB | lineage2.2.1 | cn | ERR5866107 | MDR-TB | lineage2.2.1 | None | SRR11972265 | MDR-TB | lineage2.2.1 | None | ERR4011051 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100363 | Sensitive | lineage3 | None | ERR4815859 | Sensitive | lineage4.2.2 | gb | SRR28046227 | Pre-XDR-TB | lineage2.2.1 | None | DRR130179 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290771 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863694 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040246 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865288 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286137 | XDR-TB | lineage2.2.1 | None | ERR8025622 | HR-TB | lineage2.2.1 | None | SRR10040362 | MDR-TB | lineage2.2.1 | None | SRR14782605 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121123 | MDR-TB | lineage2.2.1 | None | SRR29096310 | MDR-TB | lineage2.2.1 | None | SRR25207314 | MDR-TB | lineage2.2.1 | None | ERR3276263 | MDR-TB | lineage2.2.1 | nl | ERR2020075 | Pre-XDR-TB | lineage2.2.1 | None | ERR117711 | Sensitive | lineage3 | None | SRR20969991 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866231 | MDR-TB | lineage2.2.1 | None | SRR18593220 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865291 | Pre-XDR-TB | lineage2.2.1 | None | SRR11033761 | MDR-TB | lineage2.2.1 | None | SRR16088340 | MDR-TB | lineage2.2.1 | None | ERR5866547 | MDR-TB | lineage2.2.1 | None | ERR13292506 | MDR-TB | lineage2.2.1 | None | ERR4798984 | Sensitive | lineage3 | in | SRR6797427 | HR-TB | lineage3.1 | None | ERR10112834 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539855 | Pre-XDR-TB | lineage2.2.1 | None | SRR24222952 | MDR-TB | lineage2.2.1 | None | ERR13191370 | Pre-XDR-TB | lineage2.2.2 | None | SRR10147681 | MDR-TB | lineage2.2.1 | None | ERR4830011 | HR-TB | lineage2.2.1 | ng | ERR4811158 | Pre-XDR-TB | lineage2.2.2 | cn | ERR4830749 | MDR-TB | lineage2.2.1 | ir | ERR4830771 | MDR-TB | lineage2.2.1 | ir | ERR751429 | MDR-TB | lineage4.3.3 | pe | SRR10040499 | MDR-TB | lineage2.2.1 | None | SRR19050359 | MDR-TB | lineage2.2.1 | None | ERR8975766 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2512882 | MDR-TB | lineage2.2.1 | gb | ERR2512958 | Sensitive | lineage3 | gb | ERR2514240 | MDR-TB | lineage2.2.1 | gb | ERR13289403 | XDR-TB | lineage2.2.1 | None | SRR10040232 | MDR-TB | lineage2.2.1 | None | SRR20969897 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553689 | MDR-TB | None | ERR5866546 | MDR-TB | lineage2.2.1 | None | SRR28394010 | MDR-TB | lineage4.3.3 | None | SRR11567785 | MDR-TB | lineage4.4.2 | None | SRR17406764 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286098 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800405 | Sensitive | lineage3 | None |
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