lineage | Count |
---|---|
lineage2.2 | 1 |
lineage3 | 14 |
lineage2.2.1 | 40 |
lineage4.1.4 | 2 |
lineage4.1 | 2 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 | SRR23310974 | MDR-TB | lineage2.2 | None | ERR1034616 | Pre-XDR-TB | lineage3 | pk | ERR4816579 | Other | lineage3 | None | ERR3335741 | Pre-XDR-TB | lineage3 | pk | ERR137208 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4798124 | Pre-XDR-TB | lineage2.2.1 | in | ERR234661 | Pre-XDR-TB | lineage2.2.1 | ru | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4800478 | Pre-XDR-TB | lineage2.2.1 | in | ERR4972501 | Pre-XDR-TB | lineage4.1.4 | None | ERR4972582 | Pre-XDR-TB | lineage4.1.4 | None | SRR6831846 | MDR-TB | lineage2.2.1 | None | SRR6832385 | MDR-TB | lineage2.2.1 | None | SRR6832474 | MDR-TB | lineage2.2.1 | None | SRR6831739 | MDR-TB | lineage2.2.1 | None | ERR4811281 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6831854 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832406 | MDR-TB | lineage4.1 | None | SRR6832852 | HR-TB | lineage2.2.1 | None | ERR5866022 | MDR-TB | lineage2.2.1 | None | ERR4553826 | MDR-TB | lineage2.2.1 | None | ERR4831431 | Pre-XDR-TB | lineage3 | None | ERR4831480 | Pre-XDR-TB | lineage3 | None | ERR5865931 | MDR-TB | lineage2.2.1 | None | ERR5866023 | MDR-TB | lineage2.2.1 | None | SRR16088313 | MDR-TB | lineage2.2.1 | None | ERR688047 | Pre-XDR-TB | lineage3 | None | ERR688014 | Pre-XDR-TB | lineage3 | None | ERR688048 | Pre-XDR-TB | lineage3 | None | ERR688019 | Pre-XDR-TB | lineage3 | None | ERR688037 | Pre-XDR-TB | lineage3 | None | SRR11662685 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256126 | MDR-TB | lineage2.2.1 | None | SRR14807597 | MDR-TB | lineage2.2.1 | None | SRR24255948 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774369 | MDR-TB | lineage2.2.1 | None | ERR8774368 | MDR-TB | lineage2.2.1 | None | SRR14781937 | HR-TB | lineage4.1 | None | SRR14807589 | MDR-TB | lineage2.2.1 | None | SRR18714903 | HR-TB | lineage2.2.1 | None | SRR18500599 | Other | lineage2.2.1 | None | SRR23861833 | MDR-TB | lineage2.2.1 | None | SRR18714922 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715040 | MDR-TB | lineage2.2.1 | None | SRR23861717 | MDR-TB | lineage2.2.1 | None | SRR22757402 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256008 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256315 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255880 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207078 | Pre-XDR-TB | lineage2.2.1 | None | SRR25395614 | MDR-TB | lineage2.2.1 | None | ERR1034605 | Pre-XDR-TB | lineage3 | pk | SRR24255935 | MDR-TB | lineage2.2.1 | None | SRR25515017 | MDR-TB | lineage2.2.1 | None | SRR24256332 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034587 | Pre-XDR-TB | lineage3 | pk | ERR1034582 | Pre-XDR-TB | lineage3 | pk | ERR1034615 | Pre-XDR-TB | lineage3 | pk | ERR4813121 | Pre-XDR-TB | lineage4.3.3 | None |
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