Rv3854c - p.Pro257Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
23 MDR-TB
93 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 85 |
| lineage3 | 5 |
| lineage4.8 | 19 |
| 2 | |
| lineage4.5 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11243541 | HR-TB | lineage2.2.1 | None | ERR7911732 | Pre-XDR-TB | lineage2.2.1 | us | ERR5864789 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864745 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864767 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864772 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639787 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864777 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864785 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153308 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864783 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864747 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864791 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017168 | MDR-TB | lineage3 | None | ERR5864985 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274026 | MDR-TB | lineage4.8 | None | SRR3544747 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864764 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088145 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864781 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274157 | Pre-XDR-TB | lineage4.8 | None | ERR4553787 | MDR-TB | None | SRR5152941 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553705 | MDR-TB | lineage3 | None | SRR29273634 | Pre-XDR-TB | lineage4.8 | None | ERR11243542 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864784 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773774 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864751 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273840 | Pre-XDR-TB | lineage4.8 | None | ERR5864756 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153279 | MDR-TB | lineage2.2.1 | None | SRR18715364 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864987 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864750 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864765 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864778 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797535 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866183 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864788 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017193 | MDR-TB | lineage3 | None | SRR29017127 | MDR-TB | lineage3 | None | ERR13290737 | MDR-TB | lineage4.5 | None | ERR11773775 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709752 | Pre-XDR-TB | lineage4.2.1.1 | th | SRR5710017 | Pre-XDR-TB | lineage4.2.1.1 | th | ERR5864763 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864773 | Pre-XDR-TB | lineage2.2.1 | None | SRR28240216 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864755 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864782 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866184 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828998 | MDR-TB | lineage4.8 | it | ERR5864744 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864983 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243543 | MDR-TB | lineage2.2.1 | None | ERR3639782 | Pre-XDR-TB | lineage4.8 | None | ERR13284141 | Pre-XDR-TB | lineage4.8 | None | ERR5864769 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273870 | MDR-TB | lineage4.8 | None | ERR5864787 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738537 | MDR-TB | lineage4.8 | None | ERR5864766 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864771 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182700 | HR-TB | lineage4.5 | None | ERR5864790 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864986 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267096 | Pre-XDR-TB | lineage4.2.2 | None | ERR5864780 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864770 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430441 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714961 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864984 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864793 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864762 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119796 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553647 | MDR-TB | None | ERR5864748 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864774 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864749 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864752 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738503 | MDR-TB | lineage4.8 | None | SRR7592370 | MDR-TB | lineage4.8 | None | SRR29273718 | MDR-TB | lineage4.8 | None | SRR29273708 | MDR-TB | lineage4.8 | None | ERR5864746 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864754 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864768 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864776 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866185 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864758 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153261 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516302 | MDR-TB | lineage2.2.1 | None | ERR5864779 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864786 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069098 | Pre-XDR-TB | lineage4.8 | None | ERR5864760 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067833 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273741 | MDR-TB | lineage4.8 | None | SRR16088309 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274124 | Pre-XDR-TB | lineage4.8 | None | SRR29273828 | MDR-TB | lineage4.8 | None | ERR5864743 | Pre-XDR-TB | lineage2.2.1 | None | SRR3544716 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864982 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273744 | MDR-TB | lineage4.8 | None | ERR5864775 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827353 | XDR-TB | lineage3.1.2 | None | SRR28240000 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864742 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274149 | Pre-XDR-TB | lineage4.8 | None | ERR13284117 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798568 | Pre-XDR-TB | lineage4.2.2 | in | ERR4800365 | Pre-XDR-TB | lineage2.2.1 | in | ERR5864753 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864792 | Pre-XDR-TB | lineage2.2.1 | None | SRR6152744 | HR-TB | lineage3 | ca | SRR28393767 | MDR-TB | lineage4.3.3 | None | SRR28394120 | MDR-TB | lineage4.3.3 | None | ERR5864757 | Pre-XDR-TB | lineage2.2.1 | None |
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