Rv3854c - p.Thr342Ala
Drug resistance types
1 Sensitive
0 RR-TB
8 HR-TB
22 MDR-TB
19 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3;lineage4.8 | 3 |
| lineage2.2.1 | 22 |
| lineage4.5 | 9 |
| lineage4.1.1.1 | 1 |
| lineage2.2.1.1 | 9 |
| lineage3 | 2 |
| lineage4.1.3 | 1 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 3 |
| lineage3.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6356944 | Pre-XDR-TB | lineage4.3.3;lineage4.8 | None | SRR23938639 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794504 | MDR-TB | lineage2.2.1 | None | SRR24710164 | Pre-XDR-TB | lineage2.2.1 | None | ERR13253330 | XDR-TB | lineage4.5 | None | SRR14807555 | MDR-TB | lineage2.2.1 | None | SRR29289417 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR752149 | MDR-TB | lineage2.2.1.1 | th | SRR28706573 | HR-TB | lineage2.2.1 | None | SRR28706511 | HR-TB | lineage2.2.1 | None | SRR10040309 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709911 | Pre-XDR-TB | lineage2.2.1.1 | th | SRR6824540 | Pre-XDR-TB | lineage2.2.1 | cn | SRR14802090 | MDR-TB | lineage2.2.1 | None | ERR3132095 | MDR-TB | lineage3 | None | ERR10680036 | MDR-TB | lineage4.1.3 | None | ERR4799107 | XDR-TB | lineage4.8 | in | SRR14801391 | Sensitive | lineage4.1.2.1 | None | DRR130059 | XDR-TB | lineage4.5 | None | ERR13266027 | HR-TB | lineage4.5 | None | SRR29681485 | Pre-XDR-TB | lineage2.2.1 | None | ERR13264973 | HR-TB | lineage4.5 | None | ERR13265875 | HR-TB | lineage4.5 | None | SRR11662402 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11662440 | MDR-TB | lineage2.2.1.1 | None | ERR13266023 | HR-TB | lineage4.5 | None | ERR13266243 | HR-TB | lineage4.5 | None | SRR28706621 | MDR-TB | lineage2.2.1 | None | SRR8651650 | Pre-XDR-TB | lineage4.1.2.1 | cn | SRR11567791 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR12062508 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040314 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356992 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR671784 | Pre-XDR-TB | lineage2.2.1 | cn | SRR11662401 | MDR-TB | lineage2.2.1.1 | None | SRR11662426 | MDR-TB | lineage2.2.1.1 | None | SRR23938666 | MDR-TB | lineage2.2.1 | None | ERR4797121 | XDR-TB | lineage3.1.2 | in | ERR3132084 | MDR-TB | lineage1.1.2 | None | SRR6485135 | HR-TB | lineage4.3.3 | None | SRR10040325 | Pre-XDR-TB | lineage2.2.1 | None | SRR24828597 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356938 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR25827295 | XDR-TB | lineage4.8 | None | ERR13265732 | MDR-TB | lineage4.5 | None | SRR12062509 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305658 | XDR-TB | lineage2.2.1 | None | SRR11662268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11662545 | MDR-TB | lineage2.2.1.1 | None | ERR13265945 | MDR-TB | lineage4.5 | None | SRR11662212 | MDR-TB | lineage2.2.1.1 | None | ERR4799996 | MDR-TB | lineage4.8 | in | SRR25827338 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284817 | MDR-TB | lineage2.2.1 | None | ERR7911504 | MDR-TB | lineage2.2.1 | vn | SRR29772540 | MDR-TB | lineage3 | None |
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