Rv3854c - p.Thr61Met
Drug resistance types
0 Sensitive
0 RR-TB
18 HR-TB
50 MDR-TB
43 Pre-XDR-TB
6 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 105 |
| lineage4.1.4 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1.1;lineage3.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831095 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781975 | HR-TB | lineage2.2.1 | None | SRR14801639 | MDR-TB | lineage2.2.1 | None | SRR22048305 | Other | lineage4.1.4 | None | SRR10380074 | MDR-TB | lineage2.2.1 | None | SRR28351310 | MDR-TB | lineage2.2.1 | None | SRR28498353 | HR-TB | lineage2.2.1 | None | SRR13232766 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458439 | MDR-TB | lineage2.2.1 | None | SRR13232686 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917703 | MDR-TB | lineage2.2.1 | by | SRR6807763 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781878 | HR-TB | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | ERR10762282 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR13232636 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710229 | XDR-TB | lineage2.2.1 | None | ERR8665592 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782511 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665760 | Pre-XDR-TB | lineage2.2.1 | None | ERR8650530 | MDR-TB | lineage2.2.1 | None | ERR11068871 | MDR-TB | lineage2.2.1 | None | SRR1166154 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782201 | HR-TB | lineage2.2.1 | None | SRR10379894 | MDR-TB | lineage2.2.1 | None | SRR3743410 | MDR-TB | lineage2.2.1 | None | SRR1166176 | MDR-TB | lineage2.2.1 | None | SRR14802085 | HR-TB | lineage2.2.1 | None | ERR4798371 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR6807760 | MDR-TB | lineage2.2.1 | None | SRR14801416 | MDR-TB | lineage2.2.1 | None | ERR10762322 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379984 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755732 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781997 | MDR-TB | lineage2.2.1 | None | ERR11798575 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865939 | MDR-TB | lineage2.2.1 | None | ERR8665761 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169159 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830576 | MDR-TB | lineage2.2.1 | tm | SRR1169028 | MDR-TB | lineage2.2.1 | None | ERR8665716 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743407 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822589 | MDR-TB | lineage2.2.1 | tm | SRR22351870 | XDR-TB | lineage2.2.1 | None | ERR3148059 | MDR-TB | lineage3 | None | ERR9992697 | XDR-TB | lineage4.1.1.3 | None | SRR23311000 | XDR-TB | lineage2.2.1 | None | SRR1166303 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782034 | HR-TB | lineage2.2.1 | None | SRR1169158 | Pre-XDR-TB | lineage2.2.1 | None | SRR7341702 | HR-TB | lineage4.1.2.1 | ro | ERR4796867 | MDR-TB | lineage2.2.1.1;lineage3.1.2 | in | ERR4822592 | MDR-TB | lineage2.2.1 | tm | ERR8665849 | Pre-XDR-TB | lineage2.2.1 | None | SRR28046185 | Pre-XDR-TB | lineage3 | None | SRR28393379 | MDR-TB | lineage4.3.2 | None | ERR2510560 | Pre-XDR-TB | lineage3 | pk | ERR8665575 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458431 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584596 | Pre-XDR-TB | lineage2.2.1 | md | ERR5865937 | MDR-TB | lineage2.2.1 | None | ERR4796852 | MDR-TB | lineage2.2.1.1;lineage3.1.2 | in | ERR11798576 | MDR-TB | lineage2.2.1 | None | SRR10379977 | MDR-TB | lineage2.2.1 | None | ERR11798574 | MDR-TB | lineage2.2.1 | None | SRR13232533 | Pre-XDR-TB | lineage2.2.1 | None | ERR017788 | MDR-TB | lineage2.2.1 | ru | SRR14782042 | HR-TB | lineage2.2.1 | None | ERR10762373 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801694 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153924 | MDR-TB | lineage2.2.1 | None | SRR13232518 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232508 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865938 | MDR-TB | lineage2.2.1 | None | ERR10762407 | MDR-TB | lineage2.2.1 | None | ERR8665717 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782737 | MDR-TB | lineage2.2.1 | None | SRR23862154 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379909 | MDR-TB | lineage2.2.1 | None | SRR3743492 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798578 | MDR-TB | lineage2.2.1 | None | SRR14801517 | MDR-TB | lineage2.2.1 | None | SRR10379964 | MDR-TB | lineage2.2.1 | None | ERR7911233 | MDR-TB | lineage2.2.1 | md | ERR7911218 | Pre-XDR-TB | lineage2.2.1 | md | ERR11243557 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782108 | HR-TB | lineage2.2.1 | None | SRR14782039 | HR-TB | lineage2.2.1;lineage4.2.1 | None | SAMN02584619 | Pre-XDR-TB | lineage2.2.1 | md | SRR14782483 | HR-TB | lineage2.2.1 | None | SRR28351233 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782340 | MDR-TB | lineage2.2.1 | None | ERR11798577 | MDR-TB | lineage2.2.1 | None | ERR019862 | MDR-TB | lineage2.2.1 | None | ERR11082830 | Other | lineage4.1.4 | None | ERR10762424 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645867 | MDR-TB | lineage2.2.1 | None | ERR4872296 | XDR-TB | lineage2.2.1 | None | SRR28239905 | HR-TB | lineage2.2.1 | None | SRR10379969 | MDR-TB | lineage2.2.1 | None | SRR23311031 | HR-TB | lineage2.2.1 | None | ERR7910913 | MDR-TB | lineage2.2.1 | md | SRR5153911 | MDR-TB | lineage2.2.1 | None | SRR14782567 | XDR-TB | lineage2.2.1 | None | ERR7911034 | MDR-TB | lineage2.2.1 | md | SRR23311055 | MDR-TB | lineage2.2.1 | None | SRR14782310 | HR-TB | lineage2.2.1 | None | ERR2510868 | MDR-TB | lineage2.2.1 | it | SRR14782440 | HR-TB | lineage2.2.1 | None | SRR14801727 | HR-TB | lineage2.2.1 | None | SRR23310858 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782596 | MDR-TB | lineage2.2.1 | None | SAMN02584663 | MDR-TB | lineage2.2.1 | md | SRR3743481 | MDR-TB | lineage2.2.1 | None | SRR14801638 | MDR-TB | lineage2.2.1 | None | SRR3743487 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782485 | HR-TB | lineage2.2.1 | None | ERR8665888 | Pre-XDR-TB | lineage2.2.1 | None |
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