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SRA data
Rv3854c
- p.Trp116Cys
Drug resistance types
3 Sensitive
0 RR-TB
4 HR-TB
7 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
10
lineage2.2.2
3
lineage1.2.2.2
3
lineage4.4.2
1
1
lineage1.2.2.2;lineage2.2.1
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
19
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13290723
HR-TB
lineage2.2.1
None
ERR13290791
MDR-TB
lineage2.2.1
None
ERR13290794
HR-TB
lineage2.2.1
None
ERR13291143
HR-TB
lineage2.2.1
None
ERR2179708
Sensitive
lineage4.4.2
cn
ERR4796577
HR-TB
None
ERR4799898
MDR-TB
lineage1.2.2.2
in
ERR4799902
MDR-TB
lineage1.2.2.2;lineage2.2.1
None
SRR11567812
Pre-XDR-TB
lineage2.2.2
None
SRR11567813
Pre-XDR-TB
lineage2.2.2
None
Showing 1 to 10 of 19 entries
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