SRR1172320
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1174838
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1174829
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232574
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181072
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14781957
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232588
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13243561
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13243567
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR14782599
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14782110
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782333
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782030
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782205
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782420
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14782602
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14782658
|
MDR-TB
|
lineage4.2.1;lineage2.2.1
|
None
|
SRR14782601
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801295
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782802
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801291
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801510
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801505
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801687
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801666
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14802065
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715101
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14802068
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14802067
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14802230
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14807524
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18714829
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18714890
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14802094
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18714870
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18714910
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715283
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715135
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715112
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715279
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715302
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715330
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715463
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068214
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715471
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11068012
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068477
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068679
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068560
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068892
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068889
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2510265
|
Pre-XDR-TB
|
lineage2.2.1
|
pk
|
ERR11068891
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082744
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419621
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
ERR2510528
|
MDR-TB
|
lineage2.2.1
|
pk
|
SAMN02419639
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
SAMN02419556
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
ERR2516356
|
MDR-TB
|
lineage2.2.1
|
be
|
ERR2446278
|
MDR-TB
|
lineage2.2.1
|
nl
|
ERR2517193
|
MDR-TB
|
lineage2.2.1
|
nl
|
SRR5153819
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5153912
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516160
|
MDR-TB
|
lineage2.2.1
|
es
|
SRR23310876
|
MDR-TB
|
lineage2.2
|
None
|
SRR23310812
|
MDR-TB
|
lineage2
|
None
|
SRR23310871
|
MDR-TB
|
lineage2.2
|
None
|
SRR23310867
|
MDR-TB
|
lineage2.2
|
None
|
SRR23310877
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR23310909
|
MDR-TB
|
lineage2.2
|
None
|
SRR23310894
|
MDR-TB
|
lineage2.2
|
None
|
SRR23310958
|
MDR-TB
|
lineage2.2
|
None
|
SRR23340097
|
MDR-TB
|
lineage2.2
|
None
|
SRR23339961
|
MDR-TB
|
lineage2.2
|
None
|
ERR3275511
|
MDR-TB
|
lineage2.2.1
|
nl
|
ERR4827662
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822420
|
MDR-TB
|
lineage2.2.1
|
ua
|
ERR4822296
|
MDR-TB
|
lineage2.2.1
|
de
|
ERR4872264
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4829168
|
MDR-TB
|
lineage2.2.1
|
it
|
ERR4829376
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
ERR4828967
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6484989
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829822
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6831833
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872293
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4872313
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872343
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872279
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872326
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832020
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832223
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832144
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832528
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832390
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832272
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832378
|
MDR-TB
|
lineage4;lineage2.2.1
|
None
|
SRR6832387
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832444
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832519
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832827
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419608
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
SRR7645888
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7535045
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR7645804
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6807750
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6807751
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4872357
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11067574
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7755755
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7645947
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7755721
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR038745
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR038737
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR038744
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR1034861
|
Pre-XDR-TB
|
lineage2.2.1
|
pt
|
ERR040134
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR10762272
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762393
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762301
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762364
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762259
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762329
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11044662
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10762430
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639721
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4195753
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639755
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794407
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3794455
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639789
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794376
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794457
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794529
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4276850
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4276909
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865601
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865600
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798124
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR7910968
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR5866538
|
MDR-TB
|
lineage2.2
|
None
|
ERR5866539
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910903
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7910978
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7910976
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911061
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911052
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7975629
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR7911257
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911091
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911220
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911242
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7975630
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7975677
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7975648
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7975675
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665873
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665754
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665603
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665755
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665928
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665929
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665947
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665946
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665949
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1169091
|
MDR-TB
|
lineage4.1.2.1;lineage2.2.1
|
None
|
ERR9121304
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR987706
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR10379973
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380092
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380136
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380159
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380170
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380164
|
MDR-TB
|
lineage4.2.1;lineage2.2.1
|
None
|
SRR10380196
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1159154
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1162995
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163036
|
MDR-TB
|
lineage4.1.2.1;lineage2.2.1
|
None
|
SRR1163199
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163376
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163414
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1169009
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1169109
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1140750
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1159053
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163166
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163317
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163446
|
Pre-XDR-TB
|
lineage4.1.2.1;lineage2.2.1
|
None
|
SRR1168979
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1172093
|
Pre-XDR-TB
|
lineage4.1.2.1;lineage2.2.1
|
None
|