Rv3854c - p.Tyr147*
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
6 HR-TB
191 MDR-TB
97 Pre-XDR-TB
8 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 293 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 4 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage2.2.1;lineage4.1;lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 304 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29539757 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645888 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310877 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681214 | MDR-TB | lineage2.2.1 | None | SRR14782205 | MDR-TB | lineage2.2.1 | None | SRR10380136 | MDR-TB | lineage2.2.1 | None | SRR29539365 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807750 | MDR-TB | lineage2.2.1 | None | SRR24255875 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510265 | Pre-XDR-TB | lineage2.2.1 | pk | ERR13259969 | MDR-TB | lineage2.2.1 | None | SRR29681410 | MDR-TB | lineage2.2.1 | None | ERR11798580 | MDR-TB | lineage2.2.1 | None | SRR6832444 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801666 | MDR-TB | lineage2.2.1 | None | SRR29539321 | XDR-TB | lineage2.2.1 | None | SRR16087895 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872264 | XDR-TB | lineage2.2.1 | None | ERR3794376 | MDR-TB | lineage2.2.1 | None | SRR14801291 | MDR-TB | lineage2.2.1 | None | ERR7975629 | XDR-TB | lineage2.2.1 | None | SRR14782030 | MDR-TB | lineage2.2.1 | None | SRR14801687 | MDR-TB | lineage2.2.1 | None | SRR23310958 | MDR-TB | lineage2.2.1 | None | ERR11068560 | MDR-TB | lineage2.2.1 | None | SRR29681413 | MDR-TB | lineage2.2.1 | None | ERR11798590 | MDR-TB | lineage2.2.1 | None | SRR29539579 | MDR-TB | lineage2.2.1 | None | SRR13243561 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762259 | MDR-TB | lineage2.2.1 | None | ERR11082744 | MDR-TB | lineage2.2.1 | None | SRR18714890 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802230 | MDR-TB | lineage2.2.1 | None | SRR6832272 | HR-TB | lineage2.2.1 | None | SRR24256266 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498704 | MDR-TB | lineage2.2.1 | None | ERR4829822 | MDR-TB | lineage2.2.1 | None | ERR11798581 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911061 | MDR-TB | lineage2.2.1 | md | ERR7910903 | MDR-TB | lineage2.2.1 | md | ERR8665603 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665928 | MDR-TB | lineage2.2.1 | None | ERR8665947 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232574 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802065 | MDR-TB | lineage2.2.1 | None | ERR2516356 | MDR-TB | lineage2.2.1 | be | ERR2516160 | MDR-TB | lineage2.2.1 | es | ERR1034861 | Pre-XDR-TB | lineage2.2.1 | pt | ERR11068477 | MDR-TB | lineage2.2.1 | None | SRR6832390 | MDR-TB | lineage2.2.1 | None | ERR10762301 | MDR-TB | lineage2.2.1 | None | ERR5865600 | MDR-TB | lineage2.2.1 | None | SRR29681273 | MDR-TB | lineage2.2.1 | None | ERR2446278 | MDR-TB | lineage2.2.1 | nl | SRR28498419 | MDR-TB | lineage2.2.1 | None | ERR4872313 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285752 | MDR-TB | lineage2.2.1 | None | ERR13285841 | MDR-TB | lineage2.2.1 | None | ERR11798584 | MDR-TB | lineage2.2.1 | None | SRR1181072 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807751 | MDR-TB | lineage2.2.1 | None | SRR23310909 | MDR-TB | lineage2.2.1 | None | SRR24256187 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163414 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829168 | MDR-TB | lineage2.2.1 | it | ERR11068889 | MDR-TB | lineage2.2.1 | None | SRR16088326 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310894 | MDR-TB | lineage2.2.1 | None | SRR5153912 | MDR-TB | lineage2.2.1 | None | ERR4872357 | MDR-TB | lineage2.2.1 | None | SRR29274766 | MDR-TB | lineage2.2.1 | None | ERR11068214 | MDR-TB | lineage2.2.1 | None | SRR13232588 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276366 | MDR-TB | lineage2.2.1 | None | SRR14782110 | MDR-TB | lineage2.2.1 | None | SRR29539318 | MDR-TB | lineage2.2.1 | None | ERR13284195 | MDR-TB | lineage2.2.1 | None | SRR16088557 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088549 | MDR-TB | lineage2.2.1 | None | SRR24255974 | MDR-TB | lineage2.2.1 | None | SRR29539187 | MDR-TB | lineage2.2.1 | None | SRR1163317 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832378 | MDR-TB | lineage2.2.1;lineage4 | None | ERR3794407 | HR-TB | lineage2.2.1 | None | SRR6832020 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163036 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR7975630 | MDR-TB | lineage2.2.1 | None | ERR3639721 | MDR-TB | lineage2.2.1 | None | ERR3794529 | MDR-TB | lineage2.2.1 | None | ERR4872293 | XDR-TB | lineage2.2.1 | None | DRR473853 | Other | lineage2.2.1 | None | SRR18715279 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681433 | MDR-TB | lineage2.2.1 | None | SRR1169091 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR29538985 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665754 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801295 | MDR-TB | lineage2.2.1 | None | SRR18714910 | MDR-TB | lineage2.2.1 | None | SRR24256139 | MDR-TB | lineage2.2.1 | None | ERR13285756 | MDR-TB | lineage2.2.1 | None | SRR16087886 | MDR-TB | lineage2.2.1 | None | SRR1174829 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284833 | MDR-TB | lineage2.2.1 | None | SRR16088408 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714829 | MDR-TB | lineage2.2.1 | None | ERR13284273 | MDR-TB | lineage2.2.1 | None | SRR14801505 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802094 | MDR-TB | lineage2.2.1 | None | SRR29539436 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068012 | MDR-TB | lineage2.2.1 | None | SRR29539716 | MDR-TB | lineage2.2.1 | None | SRR29539230 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539404 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484989 | MDR-TB | lineage2.2.1 | None | ERR4798124 | Pre-XDR-TB | lineage2.2.1 | in | SRR29539745 | MDR-TB | lineage2.2.1 | None | ERR7975675 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284124 | MDR-TB | lineage2.2.1 | None | SRR10380164 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14781957 | MDR-TB | lineage2.2.1 | None | ERR4822420 | MDR-TB | lineage2.2.1 | ua | SRR29539726 | MDR-TB | lineage2.2.1 | None | ERR5866538 | RR-TB | lineage2.2.1 | None | SRR28351374 | XDR-TB | lineage2.2.1 | None | SRR28498708 | XDR-TB | lineage2.2.1 | None | SRR28351378 | MDR-TB | lineage2.2.1 | None | SRR28351623 | MDR-TB | lineage2.2.1 | None | ERR7911242 | MDR-TB | lineage2.2.1 | md | SRR28351499 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351620 | MDR-TB | lineage2.2.1 | None | ERR7910968 | MDR-TB | lineage2.2.1 | md | ERR7910976 | MDR-TB | lineage2.2.1 | md | ERR4822296 | MDR-TB | lineage2.2.1 | de | ERR8665946 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351399 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256294 | MDR-TB | lineage2.2.1 | None | ERR4195753 | MDR-TB | lineage2.2.1 | None | SRR28498582 | MDR-TB | lineage2.2.1 | None | SRR1174838 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832223 | MDR-TB | lineage2.2.1 | None | SRR29538885 | MDR-TB | lineage2.2.1 | None | ERR3794455 | MDR-TB | lineage2.2.1 | None | ERR2600544 | MDR-TB | lineage2.2.1;lineage4.1;lineage4.3.3 | None | SRR25395610 | MDR-TB | lineage2.2.1 | None | SRR28498652 | MDR-TB | lineage2.2.1 | None | SRR28351216 | Pre-XDR-TB | lineage4.2.1 | None | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | SRR29681276 | MDR-TB | lineage2.2.1 | None | SRR29539805 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645804 | MDR-TB | lineage2.2.1 | None | ERR2517193 | MDR-TB | lineage2.2.1 | nl | SRR14782333 | HR-TB | lineage2.2.1 | None | ERR10762329 | MDR-TB | lineage2.2.1 | None | SRR6832519 | MDR-TB | lineage2.2.1 | None | SRR24256034 | MDR-TB | lineage2.2.1 | None | SRR1169109 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762393 | MDR-TB | lineage2.2.1 | None | ERR11798585 | MDR-TB | lineage2.2.1 | None | ERR2600463 | MDR-TB | lineage2.2.1 | None | SRR18715283 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832387 | MDR-TB | lineage2.2.1 | None | SRR29274277 | MDR-TB | lineage2.2.1 | None | ERR10762364 | MDR-TB | lineage2.2.1 | None | ERR7975648 | MDR-TB | lineage2.2.1 | None | SRR23339961 | MDR-TB | lineage2.2.1 | None | SRR1169009 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393388 | MDR-TB | lineage4.3.4.1 | None | SRR29539218 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802068 | MDR-TB | lineage2.2.1 | None | SRR6832528 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798587 | MDR-TB | lineage2.2.1 | None | ERR11068892 | MDR-TB | lineage2.2.1 | None | ERR3275511 | MDR-TB | lineage2.2.1 | nl | SRR13243567 | XDR-TB | lineage2.2.1 | None | ERR8665755 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715330 | MDR-TB | lineage2.2.1 | None | SRR7755721 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539352 | MDR-TB | lineage2.2.1 | None | ERR4276850 | MDR-TB | lineage2.2.1 | None | SRR29539822 | MDR-TB | lineage2.2.1 | None | SRR29539629 | MDR-TB | lineage2.2.1 | None | ERR11798583 | MDR-TB | lineage2.2.1 | None | SRR18715302 | MDR-TB | lineage2.2.1 | None | SRR29681379 | MDR-TB | lineage2.2.1 | None | SRR29539214 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498577 | MDR-TB | lineage2.2.1 | None | SRR6832827 | MDR-TB | lineage2.2.1 | None | SRR1163376 | Pre-XDR-TB | lineage2.2.1 | None | SRR29538967 | MDR-TB | lineage2.2.1 | None | SRR6832144 | MDR-TB | lineage2.2.1 | None | ERR5866539 | HR-TB | lineage2.2.1 | None | SRR29539015 | MDR-TB | lineage2.2.1 | None | SRR14782420 | HR-TB | lineage2.2.1 | None | SRR29539759 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782601 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172320 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256374 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539646 | MDR-TB | lineage2.2.1 | None | SRR24256307 | MDR-TB | lineage2.2.1 | None | ERR2510528 | MDR-TB | lineage2.2.1 | pk | SRR29539602 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539790 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715471 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872343 | Pre-XDR-TB | lineage2.2.1 | None | SRR29538961 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285918 | MDR-TB | lineage2.2.1 | None | SRR28239456 | MDR-TB | lineage2.2.1 | None | SRR16088542 | MDR-TB | lineage2.2.1 | None | SRR29539215 | MDR-TB | lineage2.2.1 | None | SRR29539003 | MDR-TB | lineage2.2.1 | None | ERR13285878 | MDR-TB | lineage2.2.1 | None | SRR1172093 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR10762430 | MDR-TB | lineage2.2.1 | None | ERR4828967 | MDR-TB | lineage2.2.1 | None | SRR14802067 | MDR-TB | lineage2.2.1 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498563 | MDR-TB | lineage2.2.1 | None | SRR10380159 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256050 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911220 | MDR-TB | lineage2.2.1 | md | ERR7911257 | MDR-TB | lineage2.2.1 | md | ERR7910978 | MDR-TB | lineage2.2.1 | md | ERR8665929 | MDR-TB | lineage2.2.1 | None | ERR8665949 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665873 | MDR-TB | lineage2.2.1 | None | SRR29539789 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911052 | MDR-TB | lineage2.2.1 | md | ERR7911091 | MDR-TB | lineage2.2.1 | md | ERR4827662 | MDR-TB | lineage2.2.1 | None | ERR4872326 | MDR-TB | lineage2.2.1 | None | ERR11044662 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088333 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256032 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380092 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380196 | MDR-TB | lineage2.2.1 | None | ERR11798582 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088590 | MDR-TB | lineage2.2.1 | None | SRR14782802 | MDR-TB | lineage2.2.1 | None | SRR18714870 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715135 | MDR-TB | lineage2.2.1 | None | SRR1168979 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645947 | MDR-TB | lineage2.2.1 | None | ERR11068679 | MDR-TB | lineage2.2.1 | None | ERR11067574 | MDR-TB | lineage2.2.1 | None | SRR29539307 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539703 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310871 | HR-TB | lineage2.2.1 | None | SRR28351525 | MDR-TB | lineage2.2.1 | None | SAMN02419608 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419621 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419639 | Pre-XDR-TB | lineage2.2.1 | by | SRR18715463 | MDR-TB | lineage2.2.1 | None | SRR10379973 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762272 | MDR-TB | lineage2.2.1 | None | ERR4872279 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831833 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256337 | MDR-TB | lineage2.2.1 | None | SRR23310867 | MDR-TB | lineage2.2.1 | None | SRR1162995 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163199 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256155 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829376 | Pre-XDR-TB | lineage2.2.1 | it | SRR1163446 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR18715112 | MDR-TB | lineage2.2.1 | None | SRR28498383 | Pre-XDR-TB | lineage2.2 | None | SRR24256128 | MDR-TB | lineage2.2.1 | None | SRR18715101 | MDR-TB | lineage2.2.1 | None | ERR7975677 | MDR-TB | lineage2.2.1 | None | SRR14782602 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858583 | MDR-TB | lineage2.2.1 | None | ERR3639789 | MDR-TB | lineage2.2.1 | None | SRR28498401 | MDR-TB | lineage2.2.1 | None | SRR24256257 | MDR-TB | lineage2.2.1 | None | ERR11068891 | MDR-TB | lineage2.2.1 | None | SRR10380170 | MDR-TB | lineage2.2.1 | None | ERR13276338 | MDR-TB | lineage2.2.1 | None | ERR11798589 | MDR-TB | lineage2.2.1 | None | ERR4276909 | MDR-TB | lineage2.2.1 | None | ERR11798586 | MDR-TB | lineage2.2.1 | None | SRR29274732 | MDR-TB | lineage2.2.1 | None | ERR13285707 | MDR-TB | lineage2.2.1 | None | ERR5865601 | MDR-TB | lineage2.2.1 | None | SRR5153819 | MDR-TB | lineage2.2.1 | None | SRR14801510 | MDR-TB | lineage2.2.1 | None | SRR23340097 | MDR-TB | lineage2.2.1 | None | SRR14807524 | MDR-TB | lineage2.2.1 | None | ERR11798588 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539414 | MDR-TB | lineage2.2.1 | None | SRR29539608 | MDR-TB | lineage2.2.1 | None | SRR16087881 | XDR-TB | lineage2.2.1 | None | ERR3794457 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755755 | MDR-TB | lineage2.2.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782658 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR28351498 | MDR-TB | lineage2.2.1 | None | ERR11773839 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310876 | MDR-TB | lineage2.2.1 | None | ERR3794527 | MDR-TB | lineage2.2.1 | None | ERR3639755 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121304 | MDR-TB | lineage2.2.1 | None | SRR29539356 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163166 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
