lineage | Count |
---|---|
lineage2.2.1 | 5 |
lineage4.8 | 8 |
lineage4.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.3 | 2 |
lineage1.1.2 | 1 |
lineage4.2.1.1 | 1 |
lineage3 | 3 |
lineage1.2.1.2.1 | 4 |
lineage4.1.2.1 | 12 |
lineage4.2.2.2 | 2 |
lineage4.6.2.2 | 1 |
lineage4 | 1 |
lineage4.3.4.1 | 1 |
La1.7.1 | 2 |
lineage4.6.5 | 1 |
lineage4.7 | 2 |
lineage4.3.4.2 | 2 |
lineage6.1.3 | 1 |
lineage4.2.2.1 | 1 |
lineage4.4.1.1 | 2 |
lineage1.2.1.1 | 1 |
lineage3.1.3 | 1 |
lineage4.9 | 17 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR18715460 | MDR-TB | lineage2.2.1 | None | SRR18715111 | Pre-XDR-TB | lineage4.8 | None | SRR18715329 | MDR-TB | lineage4.2.1 | None | ERR11050801 | Sensitive | lineage4.1.2 | None | ERR11050809 | Sensitive | lineage4.3.3 | None | ERR11050813 | Sensitive | lineage1.1.2 | None | SRR24673497 | Sensitive | lineage4.2.1.1 | None | ERR11050839 | Other | lineage3 | None | ERR11050838 | Sensitive | lineage1.2.1.2.1 | None | ERR11050844 | Sensitive | lineage4.1.2.1 | None | ERR11050849 | HR-TB | lineage4.8 | None | ERR11050843 | Sensitive | lineage4.1.2.1 | None | ERR11050845 | Sensitive | lineage4.1.2.1 | None | ERR11050850 | Sensitive | lineage4.8 | None | ERR11050862 | Sensitive | lineage1.2.1.2.1 | None | ERR11050851 | Sensitive | lineage3 | None | ERR11050857 | Sensitive | lineage4.2.2.2 | None | ERR11050853 | Sensitive | lineage4.6.2.2 | None | ERR11050855 | Sensitive | lineage4 | None | ERR11050858 | HR-TB | lineage4.3.4.1 | None | ERR11050861 | Other | La1.7.1 | None | ERR11050867 | MDR-TB | lineage4.6.5 | None | ERR11050874 | Sensitive | lineage2.2.1 | None | ERR11050892 | HR-TB | lineage1.2.1.2.1 | None | ERR11050882 | Sensitive | lineage4.7 | None | ERR11050877 | HR-TB | lineage1.2.1.2.1 | None | ERR11050879 | Sensitive | lineage4.3.4.2 | None | ERR11050897 | Sensitive | lineage4.1.2.1 | None | ERR11068351 | Sensitive | lineage4.8 | None | ERR11050947 | MDR-TB | lineage2.2.1 | None | ERR11068185 | Sensitive | lineage4.1.2.1 | None | ERR11068247 | Sensitive | lineage4.2.2.2 | None | ERR11068413 | Other | lineage6.1.3 | None | ERR11068398 | HR-TB | lineage3 | None | ERR11068814 | Sensitive | lineage4.1.2.1 | None | ERR11068795 | Sensitive | lineage4.2.2.1 | None | ERR11050974 | Sensitive | lineage4.4.1.1 | None | ERR11068813 | Sensitive | lineage4.8 | None | SRR25666615 | Sensitive | lineage4.1.2.1 | None | ERR11051001 | Sensitive | lineage1.2.1.1 | None | ERR11050999 | Sensitive | lineage4.1.2.1 | None | ERR11050996 | Other | La1.7.1 | None | ERR11051008 | Sensitive | lineage4.8 | None | ERR11067138 | Sensitive | lineage4.8 | None | ERR11051002 | Sensitive | lineage2.2.1 | None | ERR11050998 | HR-TB | lineage4.3.3 | None | ERR11067141 | Sensitive | lineage4.7 | None | ERR11067169 | Sensitive | lineage3.1.3 | None | ERR11067167 | Sensitive | lineage4.8 | None | ERR11067168 | Sensitive | lineage4.1.2.1 | None | ERR11067171 | Sensitive | lineage4.1.2.1 | None | ERR11067170 | Sensitive | lineage4.1.2.1 | None | ERR11067638 | MDR-TB | lineage2.2.1 | None | ERR11067215 | Sensitive | lineage4.4.1.1 | None | SRR13837550 | Sensitive | lineage4.9 | None | ERR11050234 | HR-TB | lineage4.1.2.1 | None | ERR11050282 | MDR-TB | lineage4.5 | None | ERR11050305 | MDR-TB | lineage4.3.4.2 | None | SRR13837552 | Sensitive | lineage4.9 | None | SRR13837551 | Sensitive | lineage4.9 | None | SRR13837804 | Sensitive | lineage4.9 | None | SRR13837652 | Sensitive | lineage4.9 | None | SRR13837805 | Sensitive | lineage4.9 | None | SRR13837802 | Sensitive | lineage4.9 | None | SRR13837920 | Other | lineage4.9 | None | SRR13837803 | Sensitive | lineage4.9 | None | SRR13837908 | Sensitive | lineage4.9 | None | SRR13861177 | Sensitive | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR13861176 | Sensitive | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861587 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861480 | Other | lineage4.9 | None |
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