Rv3862c - c.-26A>G
Drug resistance types
51 Sensitive
2 RR-TB
6 HR-TB
7 MDR-TB
6 Pre-XDR-TB
5 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| lineage4.4.1.1.1 | 5 |
| lineage4.8;lineage5.1.1 | 3 |
| lineage5.1.1 | 49 |
| lineage4.9 | 1 |
| lineage4.3.4 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage5.1.1;lineage5.1.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage5.1.2;lineage6.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3 | 1 |
| lineage5.1.1;lineage5.1.2;lineage6.3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10040156 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993236 | XDR-TB | lineage4.4.1.1.1 | None | ERR3324330 | Sensitive | lineage4.8;lineage5.1.1 | None | ERR1082135 | Other | lineage5.1.1 | gh | ERR11069035 | Sensitive | lineage4.9 | None | ERR3170404 | MDR-TB | lineage5.1.1 | gh | ERR751337 | Sensitive | lineage5.1.1 | None | ERR1082126 | Sensitive | lineage5.1.1 | None | ERR1082127 | Sensitive | lineage5.1.1 | gh | ERR751508 | HR-TB | lineage4.3.4 | pe | ERR1034794 | HR-TB | lineage4.3.4 | pe | ERR11466359 | Sensitive | lineage4.3.4.2.1 | None | ERR751291 | Other | lineage5.1.1;lineage5.1.2 | gh | SRR21732412 | Other | lineage2.2.1 | None | ERR702417 | Sensitive | lineage5.1.1 | gh | ERR4814556 | Sensitive | lineage5.1.1 | gb | ERR702403 | Sensitive | lineage5.1.1 | gh | SRR13180340 | Other | lineage4.3.4.2 | None | ERR9992641 | XDR-TB | lineage4.4.1.1.1 | None | DRR474088 | Sensitive | lineage2.2.1 | None | ERR751329 | Sensitive | lineage5.1.1 | None | ERR1203074 | Other | lineage5.1.1 | gh | ERR11466013 | Sensitive | lineage4.3.4.2.1 | None | ERR1082120 | HR-TB | lineage5.1.1 | gh | SRR13591364 | Sensitive | lineage4.3.4.1 | None | ERR502494 | Other | lineage5.1.1 | None | SRR29081000 | MDR-TB | lineage1.2.1.2.1 | None | ERR4815993 | HR-TB | lineage4.8 | gb | ERR4815565 | Sensitive | lineage5.1.1 | gb | SRR29055733 | Sensitive | lineage5.1.1 | None | ERR11068720 | Sensitive | lineage4.4.1.1 | None | ERR9992637 | XDR-TB | lineage4.4.1.1.1 | None | ERR12311957 | Other | lineage4.1.2.1 | None | SRR10305870 | Other | lineage2.2.1 | None | ERR751293 | Sensitive | lineage5.1.2;lineage6.3.1 | gh | ERR4813703 | MDR-TB | lineage4.3.3 | None | ERR13260862 | XDR-TB | lineage4.4.1.1.1 | None | ERR909753 | Sensitive | lineage5.1.1 | None | ERR3170435 | Sensitive | lineage5.1.1 | gh | ERR751290 | Other | lineage5.1.1 | gh | SRR25515665 | Sensitive | lineage2.2.1 | None | ERR1082132 | Sensitive | lineage5.1.1 | gh | ERR1215468 | Sensitive | lineage5.1.1 | None | SRR7070347 | Sensitive | lineage5.1.1 | None | SRR13180381 | Sensitive | lineage4.3.4.2 | None | SRR12062521 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510210 | HR-TB | lineage4.3.4 | pe | ERR502502 | Sensitive | lineage5.1.1 | gh | ERR751334 | Sensitive | lineage5.1.1 | gh | ERR9993118 | XDR-TB | lineage4.4.1.1.1 | None | ERR1633919 | Sensitive | lineage4.1.1.3 | za | ERR3324341 | Sensitive | lineage4.8;lineage5.1.1 | None | ERR495148 | Sensitive | lineage4.1.1.3 | None | SRR12470242 | HR-TB | lineage5.1.1 | None | ERR751327 | Sensitive | lineage5.1.1 | None | ERR1082115 | Sensitive | lineage5.1.1 | gh | ERR3170440 | RR-TB | lineage5.1.1 | gh | ERR4796564 | Sensitive | lineage3 | in | DRR184624 | Sensitive | lineage2.2.1 | vn | SRR13180335 | Other | lineage4.3.4.2 | None | ERR502500 | Sensitive | lineage5.1.1 | gh | ERR3170490 | MDR-TB | lineage5.1.1 | gh | ERR439964 | Sensitive | lineage5.1.1 | None | ERR11043750 | Other | lineage5.1.1 | None | ERR751292 | Sensitive | lineage5.1.1;lineage5.1.2;lineage6.3.1 | gh | ERR4830180 | RR-TB | lineage2.2.1 | None | ERR702402 | Other | lineage5.1.1 | gh | ERR702411 | Sensitive | lineage5.1.1 | gh | ERR702431 | Other | lineage5.1.1 | gh | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3170480 | Sensitive | lineage5.1.1 | gh | ERR3324375 | Other | lineage1.1.3.2 | None | ERR1334053 | MDR-TB | lineage5.1.1 | gh | ERR502477 | Sensitive | lineage5.1.1 | gh | ERR11465098 | Sensitive | lineage4.3.4.2.1 | None | ERR1203061 | Other | lineage5.1.1 | gh | ERR234144 | Sensitive | lineage5.1.1 | gh | SRR25515776 | Sensitive | lineage2.2.1 | None | ERR1082143 | Sensitive | lineage5.1.1 | gh | ERR3170473 | Sensitive | lineage5.1.1 | gh | SRR8651654 | Pre-XDR-TB | lineage2.2.1 | cn | ERR439996 | Sensitive | lineage5.1.1 | None | SRR11461656 | MDR-TB | lineage5.1.1 | None | ERR11465576 | Sensitive | lineage4.3.4.2.1 | None | SRR21277106 | Sensitive | lineage2.2.1.1 | None | ERR1203053 | MDR-TB | lineage5.1.1 | gh | ERR2503497 | Sensitive | lineage4.2.1.1 | fi | ERR279617 | Sensitive | lineage4.1.1.3 | None | ERR751349 | Sensitive | lineage4.8;lineage5.1.1 | gh | ERR13267693 | Other | lineage5.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR751344 | Other | lineage5.1.1 | gh | SRR12062522 | Pre-XDR-TB | lineage2.2.1 | None | ERR9891980 | Sensitive | lineage5.1.1 | None | ERR13290999 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081413 | Other | lineage5.1.1 | None | ERR13272942 | Other | lineage5.1.1 | None |
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