Rv3862c - c.-76_-75delAGinsC
Drug resistance types
35 Sensitive
3 RR-TB
8 HR-TB
18 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 71 |
| lineage4.3.4.2 | 4 |
| lineage2.2.1 | 20 |
| lineage4.4.1.2 | 1 |
| lineage4.3.3 | 6 |
| lineage4.8 | 6 |
| lineage2.2.2 | 2 |
| lineage3 | 6 |
| lineage3.1.1 | 3 |
| lineage2.2.1.1 | 4 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.7 | 2 |
| lineage4.3.1 | 2 |
| lineage1.1.2;lineage4.1.1.3 | 3 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 139 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12199383 | Other | lineage1.1.2 | None | SRR25827658 | Other | lineage1.1.2 | None | ERR270640 | Other | lineage1.1.2 | None | SRR28394110 | Sensitive | lineage4.3.4.2 | None | SRR8380940 | Other | lineage1.1.2 | in | ERR5987453 | MDR-TB | lineage2.2.1 | None | SRR28044775 | Other | lineage1.1.2 | None | SRR30182622 | Other | lineage1.1.2 | None | ERR11069133 | MDR-TB | lineage2.2.1 | None | ERR4819465 | Sensitive | lineage4.4.1.2 | gb | ERR1023306 | Sensitive | lineage4.3.3 | None | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | SRR7069411 | Other | lineage1.1.2 | None | ERR4799179 | Other | lineage1.1.2 | None | SRR14519661 | Other | lineage1.1.2 | None | SRR2101601 | Sensitive | lineage2.2.1 | None | ERR502890 | MDR-TB | lineage2.2.1 | None | ERR11252455 | Sensitive | lineage4.8 | None | SRR28045663 | Other | lineage1.1.2 | None | SRR22179536 | Other | lineage1.1.2 | None | SRR25340757 | Other | lineage1.1.2 | None | SRR6982120 | Other | lineage2.2.2 | None | SAMN02350469 | Sensitive | lineage2.2.1 | za | ERR2512472 | Sensitive | lineage3 | gb | ERR4820621 | HR-TB | lineage3.1.1 | gb | SRR26399438 | Sensitive | lineage2.2.1.1 | None | SRR1019147 | Sensitive | lineage2.2.1 | None | SRR7069424 | Other | lineage1.1.2 | None | ERR9119244 | Sensitive | lineage2.2.1.1 | None | ERR4813599 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | ERR11049488 | Other | lineage1.1.2 | None | SRR7070111 | Other | lineage1.1.2 | None | SRR28046280 | HR-TB | lineage1.1.2 | None | SRR28467048 | HR-TB | lineage4.5 | None | SRR21733133 | Other | lineage1.1.2 | None | ERR4820727 | Other | lineage1.1.2 | None | SRR6982189 | Sensitive | lineage2.2.1 | None | ERR2514770 | Other | lineage1.1.2 | gb | SRR23252663 | Sensitive | lineage4.4.1.1 | None | ERR4820704 | Sensitive | lineage3 | None | ERR2512978 | Sensitive | lineage3 | gb | ERR2514092 | Other | lineage1.1.2 | gb | SRR22251309 | Other | lineage1.1.2 | None | SRR2100977 | Other | lineage1.1.2 | None | ERR9027253 | Other | lineage1.1.2 | None | SRR21576570 | MDR-TB | lineage2.2.1 | None | ERR13264866 | HR-TB | lineage4.1.2 | None | ERR4025058 | Sensitive | lineage4.7 | None | ERR3077950 | MDR-TB | lineage3.1.1 | None | ERR3077950 | MDR-TB | lineage3.1.1 | None | ERR553079 | Sensitive | lineage4.3.1 | de | SRR28044818 | HR-TB | lineage1.1.2 | None | ERR278606 | Other | lineage1.1.2 | None | ERR9117792 | Other | lineage1.1.2 | None | ERR13261485 | Other | lineage1.1.2 | None | SAMN03246414 | Pre-XDR-TB | lineage2.2.1 | cn | SRR22251091 | Other | lineage1.1.2 | None | ERR4816749 | Other | lineage1.1.2 | None | SRR5073870 | MDR-TB | lineage2.2.1 | vn | SRR25827787 | Sensitive | lineage4.3.3 | None | SRR1140922 | Sensitive | lineage2.2.1 | None | SRR28045422 | Other | lineage1.1.2 | None | ERR11811402 | Other | lineage4.8 | None | SRR29772518 | MDR-TB | lineage1.1.2 | None | SRR29772518 | MDR-TB | lineage1.1.2 | None | SRR30182731 | Other | lineage1.1.2 | None | ERR4831735 | MDR-TB | lineage2.2.1 | vn | SRR6832826 | Sensitive | lineage4.8 | None | SRR22251383 | Sensitive | lineage4.8 | None | SRR22250228 | Other | lineage1.1.2 | None | ERR1193830 | Sensitive | lineage4.3.1 | gr | ERR386965 | Other | lineage1.1.2 | None | ERR351888 | Other | lineage1.1.2 | None | SRR29772699 | MDR-TB | lineage1.1.2 | None | SRR25340816 | Other | lineage1.1.2 | None | ERR11811444 | Sensitive | lineage4.8 | None | SRR5074105 | HR-TB | lineage2.2.1 | vn | ERR13292054 | Other | lineage1.1.2 | None | ERR2512972 | Other | lineage1.1.2 | None | SRR21240173 | Sensitive | lineage4.3.3 | None | ERR9657179 | Other | lineage1.1.2 | None | SRR2101586 | Other | lineage2.2.2 | None | SRR21732219 | Other | lineage1.1.2 | None | ERR4799624 | Other | lineage1.1.2 | in | SRR2100184 | RR-TB | lineage1.1.2;lineage4.1.1.3 | None | SRR2100184 | RR-TB | lineage1.1.2;lineage4.1.1.3 | None | SRR21689731 | Other | lineage1.1.2 | None | ERR4798036 | Other | lineage1.1.2 | in | ERR4819215 | Other | lineage1.1.2 | gb | SRR21732745 | Other | lineage1.1.2 | None | ERR4830254 | Sensitive | lineage2.2.1.1 | vn | SRR25340890 | Other | lineage1.1.2 | None | SRR12420430 | Sensitive | lineage2.2.1 | None | SRR23252669 | Sensitive | lineage4.4.1.1 | None | SRR29017558 | Sensitive | lineage4.3.2 | None | ERR4815809 | Other | lineage1.1.2 | gb | ERR400317 | Sensitive | lineage2.2.1 | gb | SRR2101070 | Other | lineage1.1.2 | None | SRR28044417 | Other | lineage1.1.2 | None | SRR29126655 | Other | lineage1.1.2 | None | SRR22251341 | Other | lineage1.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514047 | Other | lineage1.1.2 | gb | ERR4816710 | Other | lineage1.1.2 | gb | SRR7070148 | Other | lineage1.1.2 | None | ERR2512726 | Other | lineage1.1.2 | gb | ERR123949 | RR-TB | lineage1.1.2;lineage4.1.1.3 | None | SRR26399406 | Sensitive | lineage2.2.1.1 | None | ERR4816513 | Other | lineage1.1.2 | None | SRR7898226 | Other | lineage1.1.2 | in | SRR27450495 | Sensitive | lineage4.3.4.1 | None | SRR28394010 | MDR-TB | lineage4.3.3 | None | ERR11798585 | MDR-TB | lineage2.2.1 | None | ERR11798585 | MDR-TB | lineage2.2.1 | None | ERR11067680 | Other | lineage1.1.2 | None | SRR8375616 | Other | lineage1.1.2 | None | SRR12416821 | MDR-TB | lineage4.3.3 | None | SRR8758880 | MDR-TB | lineage4.2.1 | None | ERR12057463 | Sensitive | lineage4.3.4.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR8380910 | Other | lineage1.1.2 | in | SRR2101226 | Other | lineage1.1.2 | None | SRR14519756 | Other | lineage1.1.2 | None | ERR2514699 | Other | lineage1.1.2 | gb | SRR22424945 | Other | lineage1.1.2 | None | ERR4811729 | Other | lineage4.3.4.2 | pe | ERR2514548 | Other | lineage1.1.2 | gb | ERR4800152 | HR-TB | lineage3 | None | ERR4800152 | HR-TB | lineage3 | None | ERR9119770 | MDR-TB | lineage2.2.1 | None | ERR4818679 | Other | lineage1.1.2 | gb | SRR10159376 | Sensitive | lineage4.4.1.1 | None | ERR11068150 | Sensitive | lineage3 | None | SRR14782831 | Sensitive | lineage4.8 | None | ERR751374 | Other | lineage4.3.4.2 | pe | ERR386820 | Other | lineage1.1.2 | None | SRR16101270 | Other | lineage1.1.2 | None | SRR7069300 | Other | lineage1.1.2 | None | ERR6865482 | Sensitive | lineage4.7 | None |
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